BLASTX nr result

ID: Dioscorea21_contig00005263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005263
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279389.1| PREDICTED: probable ATP synthase 24 kDa subu...   188   3e-46
emb|CAN62814.1| hypothetical protein VITISV_031883 [Vitis vinifera]   188   3e-46
ref|XP_004141966.1| PREDICTED: probable ATP synthase 24 kDa subu...   176   2e-42
ref|XP_004164946.1| PREDICTED: probable ATP synthase 24 kDa subu...   174   5e-42
ref|XP_002532180.1| conserved hypothetical protein [Ricinus comm...   174   7e-42

>ref|XP_002279389.1| PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial
           [Vitis vinifera] gi|296082520|emb|CBI21525.3| unnamed
           protein product [Vitis vinifera]
          Length = 240

 Score =  188 bits (478), Expect = 3e-46
 Identities = 95/123 (77%), Positives = 108/123 (87%)
 Frame = +1

Query: 118 MAMAARLLSRSKQLYAGRAVFQYEHAVPVRYFAKEAAPPSQTPLKGDEMLKGIFYEVKNK 297
           MA ++RLLS+SKQLY  + + Q +HAVPVR+FAKEAAPP+   LKGDEMLK IF EVK K
Sbjct: 1   MAFSSRLLSKSKQLYGSQIILQQQHAVPVRFFAKEAAPPA---LKGDEMLKNIFLEVKKK 57

Query: 298 FETALGILRTEKITIDPDDPAAVSQYAKVMKTVREKADLFSESQRIKYTIQQRTQDIPDA 477
           FETA+G+LR EKITIDP+DPAAV+QYAKVMKTVREKADLFSESQRI+YTIQ RTQ IPDA
Sbjct: 58  FETAMGVLRKEKITIDPEDPAAVNQYAKVMKTVREKADLFSESQRIQYTIQTRTQGIPDA 117

Query: 478 RTY 486
           RTY
Sbjct: 118 RTY 120


>emb|CAN62814.1| hypothetical protein VITISV_031883 [Vitis vinifera]
          Length = 240

 Score =  188 bits (478), Expect = 3e-46
 Identities = 95/123 (77%), Positives = 108/123 (87%)
 Frame = +1

Query: 118 MAMAARLLSRSKQLYAGRAVFQYEHAVPVRYFAKEAAPPSQTPLKGDEMLKGIFYEVKNK 297
           MA ++RLLS+SKQLY  + + Q +HAVPVR+FAKEAAPP+   LKGDEMLK IF EVK K
Sbjct: 1   MAFSSRLLSKSKQLYGSQIILQQQHAVPVRFFAKEAAPPA---LKGDEMLKNIFLEVKKK 57

Query: 298 FETALGILRTEKITIDPDDPAAVSQYAKVMKTVREKADLFSESQRIKYTIQQRTQDIPDA 477
           FETA+G+LR EKITIDP+DPAAV+QYAKVMKTVREKADLFSESQRI+YTIQ RTQ IPDA
Sbjct: 58  FETAMGVLRKEKITIDPEDPAAVNQYAKVMKTVREKADLFSESQRIQYTIQTRTQGIPDA 117

Query: 478 RTY 486
           RTY
Sbjct: 118 RTY 120


>ref|XP_004141966.1| PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial-like
           [Cucumis sativus]
          Length = 240

 Score =  176 bits (446), Expect = 2e-42
 Identities = 89/123 (72%), Positives = 103/123 (83%)
 Frame = +1

Query: 118 MAMAARLLSRSKQLYAGRAVFQYEHAVPVRYFAKEAAPPSQTPLKGDEMLKGIFYEVKNK 297
           MA+++RLLS+SKQ+   +++    HA PVR+FAKEAAPP+   LKGDEMLK IF EVK K
Sbjct: 1   MALSSRLLSKSKQVLGSQSILHQGHAFPVRHFAKEAAPPA---LKGDEMLKNIFLEVKKK 57

Query: 298 FETALGILRTEKITIDPDDPAAVSQYAKVMKTVREKADLFSESQRIKYTIQQRTQDIPDA 477
           FETAL + + EKITIDPDDPAAV+QYAKVMK  REKADLFSESQRIKYTIQ RTQDIPDA
Sbjct: 58  FETALAVFKKEKITIDPDDPAAVAQYAKVMKLAREKADLFSESQRIKYTIQTRTQDIPDA 117

Query: 478 RTY 486
           R+Y
Sbjct: 118 RSY 120


>ref|XP_004164946.1| PREDICTED: probable ATP synthase 24 kDa subunit, mitochondrial-like
           [Cucumis sativus]
          Length = 240

 Score =  174 bits (442), Expect = 5e-42
 Identities = 88/123 (71%), Positives = 102/123 (82%)
 Frame = +1

Query: 118 MAMAARLLSRSKQLYAGRAVFQYEHAVPVRYFAKEAAPPSQTPLKGDEMLKGIFYEVKNK 297
           MA+++RLLS+SKQ+   +++    H  PVR+FAKEAAPP+   LKGDEMLK IF EVK K
Sbjct: 1   MALSSRLLSKSKQVLGSQSILHQGHVFPVRHFAKEAAPPA---LKGDEMLKNIFLEVKKK 57

Query: 298 FETALGILRTEKITIDPDDPAAVSQYAKVMKTVREKADLFSESQRIKYTIQQRTQDIPDA 477
           FETAL + + EKITIDPDDPAAV+QYAKVMK  REKADLFSESQRIKYTIQ RTQDIPDA
Sbjct: 58  FETALAVFKKEKITIDPDDPAAVAQYAKVMKLAREKADLFSESQRIKYTIQTRTQDIPDA 117

Query: 478 RTY 486
           R+Y
Sbjct: 118 RSY 120


>ref|XP_002532180.1| conserved hypothetical protein [Ricinus communis]
           gi|223528128|gb|EEF30198.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score =  174 bits (441), Expect = 7e-42
 Identities = 92/126 (73%), Positives = 106/126 (84%), Gaps = 3/126 (2%)
 Frame = +1

Query: 118 MAMAARLLSRSKQLYAGRAVFQYEHAV-PVRYFAK--EAAPPSQTPLKGDEMLKGIFYEV 288
           MA ++RLLSRSKQ+Y  R + Q +  V PVRYFAK  +AAPP+   LKGDEMLK +F +V
Sbjct: 1   MAFSSRLLSRSKQVYGNRVIMQQQELVIPVRYFAKKADAAPPA---LKGDEMLKNVFLDV 57

Query: 289 KNKFETALGILRTEKITIDPDDPAAVSQYAKVMKTVREKADLFSESQRIKYTIQQRTQDI 468
           K KFETA+GILR EKITI P+DPAAVSQYAKVMKT+REKADLFSESQRIKYTI+ RT+DI
Sbjct: 58  KRKFETAIGILRKEKITIAPEDPAAVSQYAKVMKTIREKADLFSESQRIKYTIETRTKDI 117

Query: 469 PDARTY 486
           PDARTY
Sbjct: 118 PDARTY 123


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