BLASTX nr result

ID: Dioscorea21_contig00005259 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005259
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus c...    78   6e-13
ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isof...    77   1e-12
ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isof...    77   1e-12
ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-lik...    76   3e-12
ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-lik...    76   3e-12

>ref|XP_002526608.1| DNA repair protein xp-E, putative [Ricinus communis]
            gi|223534048|gb|EEF35767.1| DNA repair protein xp-E,
            putative [Ricinus communis]
          Length = 1033

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 37/42 (88%), Positives = 42/42 (100%)
 Frame = -3

Query: 211  DARNFLDGDLIESFLDLNRNRMEEISKAMGVSVEELCKRVEE 86
            +A+NFLDGDLIESFLDL+RNRM+EISKA+GVSVEELCKRVEE
Sbjct: 987  EAKNFLDGDLIESFLDLSRNRMDEISKAIGVSVEELCKRVEE 1028


>ref|XP_002280744.1| PREDICTED: DNA damage-binding protein 1 isoform 2 [Vitis vinifera]
          Length = 1068

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = -3

Query: 211  DARNFLDGDLIESFLDLNRNRMEEISKAMGVSVEELCKRVEE 86
            DA+NFLDGDLIE+FLDLNR RM+EISKAM VSVEELCKRVEE
Sbjct: 1022 DAKNFLDGDLIETFLDLNRTRMDEISKAMAVSVEELCKRVEE 1063


>ref|XP_002280735.1| PREDICTED: DNA damage-binding protein 1 isoform 1 [Vitis vinifera]
          Length = 1089

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = -3

Query: 211  DARNFLDGDLIESFLDLNRNRMEEISKAMGVSVEELCKRVEE 86
            DA+NFLDGDLIE+FLDLNR RM+EISKAM VSVEELCKRVEE
Sbjct: 1043 DAKNFLDGDLIETFLDLNRTRMDEISKAMAVSVEELCKRVEE 1084


>ref|XP_003525025.1| PREDICTED: DNA damage-binding protein 1a-like isoform 2 [Glycine max]
          Length = 1068

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/42 (85%), Positives = 41/42 (97%)
 Frame = -3

Query: 211  DARNFLDGDLIESFLDLNRNRMEEISKAMGVSVEELCKRVEE 86
            +ARNFLDGDLIESFLDLNR++M+EISKA+ VSVEELCKRVEE
Sbjct: 1022 EARNFLDGDLIESFLDLNRSKMDEISKALDVSVEELCKRVEE 1063


>ref|XP_003525024.1| PREDICTED: DNA damage-binding protein 1a-like isoform 1 [Glycine max]
          Length = 1089

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/42 (85%), Positives = 41/42 (97%)
 Frame = -3

Query: 211  DARNFLDGDLIESFLDLNRNRMEEISKAMGVSVEELCKRVEE 86
            +ARNFLDGDLIESFLDLNR++M+EISKA+ VSVEELCKRVEE
Sbjct: 1043 EARNFLDGDLIESFLDLNRSKMDEISKALDVSVEELCKRVEE 1084


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