BLASTX nr result

ID: Dioscorea21_contig00005258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005258
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307923.1| predicted protein [Populus trichocarpa] gi|2...   279   2e-73
ref|XP_004155757.1| PREDICTED: endoplasmic reticulum-Golgi inter...   276   2e-72
ref|XP_004140296.1| PREDICTED: endoplasmic reticulum-Golgi inter...   276   2e-72
ref|XP_002322569.1| predicted protein [Populus trichocarpa] gi|2...   276   2e-72
gb|ABK93267.1| unknown [Populus trichocarpa]                          276   2e-72

>ref|XP_002307923.1| predicted protein [Populus trichocarpa] gi|222853899|gb|EEE91446.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  279 bits (713), Expect = 2e-73
 Identities = 132/148 (89%), Positives = 140/148 (94%)
 Frame = -2

Query: 444 NIFVAQQIFGGAAHVNVSHMIHDLSFGPKYPGIHNPLDGTTRILHETSGTFKYYIKIVPT 265
           NIFVAQ IF GA HVNVSH+IHDLSFGPKYPGIHNPLDGTTRILHETSGTFKYYIKIVPT
Sbjct: 196 NIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTTRILHETSGTFKYYIKIVPT 255

Query: 264 DYRYLSKDVLPTNQFSVTEYFVPIRDGDRSWPAVYFLYDLSPITVTIKEERRSFLHFITR 85
           +YRY+SK+VLPTNQFSVTEYF P+ D DR+WPAVYFLYDLSPITVTIKEERRSFLHFITR
Sbjct: 256 EYRYISKEVLPTNQFSVTEYFSPMTDFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITR 315

Query: 84  LCAVLGGTFALTGMLDRWMFRLIESFTK 1
           LCAVLGGTFALTGMLDRWM RL+E+ TK
Sbjct: 316 LCAVLGGTFALTGMLDRWMCRLLEALTK 343


>ref|XP_004155757.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
           protein 3-like [Cucumis sativus]
          Length = 266

 Score =  276 bits (705), Expect = 2e-72
 Identities = 129/148 (87%), Positives = 138/148 (93%)
 Frame = -2

Query: 444 NIFVAQQIFGGAAHVNVSHMIHDLSFGPKYPGIHNPLDGTTRILHETSGTFKYYIKIVPT 265
           NIFVAQ IFGG+ HVNVSHMIHDLSFGPKYPGIHNPLDGT RIL +TSGTFKYYIKIVPT
Sbjct: 113 NIFVAQMIFGGSKHVNVSHMIHDLSFGPKYPGIHNPLDGTVRILRDTSGTFKYYIKIVPT 172

Query: 264 DYRYLSKDVLPTNQFSVTEYFVPIRDGDRSWPAVYFLYDLSPITVTIKEERRSFLHFITR 85
           +Y+Y+SK VLPTNQFSVTEYF P+ D DRSWPAVYFLYDLSPITVTIKEERRSFLHFITR
Sbjct: 173 EYKYISKAVLPTNQFSVTEYFSPMTDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITR 232

Query: 84  LCAVLGGTFALTGMLDRWMFRLIESFTK 1
           LCAVLGGTFA+TGMLDRWMFR +E+ TK
Sbjct: 233 LCAVLGGTFAVTGMLDRWMFRFLEALTK 260


>ref|XP_004140296.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
           protein 3-like [Cucumis sativus]
          Length = 388

 Score =  276 bits (705), Expect = 2e-72
 Identities = 129/148 (87%), Positives = 138/148 (93%)
 Frame = -2

Query: 444 NIFVAQQIFGGAAHVNVSHMIHDLSFGPKYPGIHNPLDGTTRILHETSGTFKYYIKIVPT 265
           NIFVAQ IFGG+ HVNVSHMIHDLSFGPKYPGIHNPLDGT RIL +TSGTFKYYIKIVPT
Sbjct: 235 NIFVAQMIFGGSKHVNVSHMIHDLSFGPKYPGIHNPLDGTVRILRDTSGTFKYYIKIVPT 294

Query: 264 DYRYLSKDVLPTNQFSVTEYFVPIRDGDRSWPAVYFLYDLSPITVTIKEERRSFLHFITR 85
           +Y+Y+SK VLPTNQFSVTEYF P+ D DRSWPAVYFLYDLSPITVTIKEERRSFLHFITR
Sbjct: 295 EYKYISKAVLPTNQFSVTEYFSPMTDSDRSWPAVYFLYDLSPITVTIKEERRSFLHFITR 354

Query: 84  LCAVLGGTFALTGMLDRWMFRLIESFTK 1
           LCAVLGGTFA+TGMLDRWMFR +E+ TK
Sbjct: 355 LCAVLGGTFAVTGMLDRWMFRFLEALTK 382


>ref|XP_002322569.1| predicted protein [Populus trichocarpa] gi|222867199|gb|EEF04330.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  276 bits (705), Expect = 2e-72
 Identities = 130/148 (87%), Positives = 138/148 (93%)
 Frame = -2

Query: 444 NIFVAQQIFGGAAHVNVSHMIHDLSFGPKYPGIHNPLDGTTRILHETSGTFKYYIKIVPT 265
           NIFVAQ IF GA HVNVSH+IHDLSFGPKYPGIHNPLDGT RIL ETSG FKYYIKIVPT
Sbjct: 196 NIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTARILRETSGIFKYYIKIVPT 255

Query: 264 DYRYLSKDVLPTNQFSVTEYFVPIRDGDRSWPAVYFLYDLSPITVTIKEERRSFLHFITR 85
           +YRY+SKDVLPTNQFSVTEYF PI D DR+WPAVYFLYDLSPITVTIKEERRSFLHFITR
Sbjct: 256 EYRYISKDVLPTNQFSVTEYFSPITDFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITR 315

Query: 84  LCAVLGGTFALTGMLDRWMFRLIESFTK 1
           LCA+LGGTFALTGMLDRWM+RL+E+ TK
Sbjct: 316 LCAILGGTFALTGMLDRWMYRLLEALTK 343


>gb|ABK93267.1| unknown [Populus trichocarpa]
          Length = 366

 Score =  276 bits (705), Expect = 2e-72
 Identities = 130/148 (87%), Positives = 138/148 (93%)
 Frame = -2

Query: 444 NIFVAQQIFGGAAHVNVSHMIHDLSFGPKYPGIHNPLDGTTRILHETSGTFKYYIKIVPT 265
           NIFVAQ IF GA HVNVSH+IHDLSFGPKYPGIHNPLDGT RIL ETSG FKYYIKIVPT
Sbjct: 211 NIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTARILRETSGIFKYYIKIVPT 270

Query: 264 DYRYLSKDVLPTNQFSVTEYFVPIRDGDRSWPAVYFLYDLSPITVTIKEERRSFLHFITR 85
           +YRY+SKDVLPTNQFSVTEYF PI D DR+WPAVYFLYDLSPITVTIKEERRSFLHFITR
Sbjct: 271 EYRYISKDVLPTNQFSVTEYFSPITDFDRTWPAVYFLYDLSPITVTIKEERRSFLHFITR 330

Query: 84  LCAVLGGTFALTGMLDRWMFRLIESFTK 1
           LCA+LGGTFALTGMLDRWM+RL+E+ TK
Sbjct: 331 LCAILGGTFALTGMLDRWMYRLLEALTK 358


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