BLASTX nr result

ID: Dioscorea21_contig00005239 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005239
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558139.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   189   5e-46
ref|XP_002468026.1| hypothetical protein SORBIDRAFT_01g038290 [S...   186   5e-45
gb|ACG47288.1| NADH-ubiquinone oxidoreductase 19 kDa subunit [Ze...   186   5e-45
ref|NP_001169034.1| uncharacterized protein LOC100382870 [Zea ma...   184   1e-44
ref|NP_001049824.2| Os03g0295500 [Oryza sativa Japonica Group] g...   184   1e-44

>ref|XP_003558139.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 8-A-like isoform 1 [Brachypodium distachyon]
          Length = 110

 Score =  189 bits (480), Expect = 5e-46
 Identities = 87/107 (81%), Positives = 94/107 (87%)
 Frame = -3

Query: 581 ASSSVDAAGEPIPTSSVLMAASKHIAVRCRSENMAFITCKKKDANPEKCLDKGRQVTACV 402
           +S+ VDA+GEPIPTSSVLMAASKHIAVRC+ ENMAF+ CKKKD NPEKCL+KGRQVT CV
Sbjct: 4   SSTPVDASGEPIPTSSVLMAASKHIAVRCQPENMAFLNCKKKDPNPEKCLEKGRQVTRCV 63

Query: 401 VNLLKSLHQKCPKEMDAYASCMYYNTNEFDMCRKEQHEFEAACPVSE 261
            NLLK LHQKCPKEMDAYA CMYY TNEFD CRKEQ  FE ACP+SE
Sbjct: 64  FNLLKDLHQKCPKEMDAYAGCMYYYTNEFDFCRKEQEAFEGACPISE 110


>ref|XP_002468026.1| hypothetical protein SORBIDRAFT_01g038290 [Sorghum bicolor]
           gi|241921880|gb|EER95024.1| hypothetical protein
           SORBIDRAFT_01g038290 [Sorghum bicolor]
          Length = 110

 Score =  186 bits (471), Expect = 5e-45
 Identities = 85/107 (79%), Positives = 94/107 (87%)
 Frame = -3

Query: 581 ASSSVDAAGEPIPTSSVLMAASKHIAVRCRSENMAFITCKKKDANPEKCLDKGRQVTACV 402
           +S+ VDA+GEPIPTSSVLMAASKHIAVRCR EN+AF+ CKKKD NPEKCL+KGRQVT CV
Sbjct: 4   SSAPVDASGEPIPTSSVLMAASKHIAVRCRPENVAFLNCKKKDPNPEKCLEKGRQVTRCV 63

Query: 401 VNLLKSLHQKCPKEMDAYASCMYYNTNEFDMCRKEQHEFEAACPVSE 261
           ++LLK LHQKCPKEMD YA CMYY TNEFD CRKEQ  FE ACP+SE
Sbjct: 64  LSLLKELHQKCPKEMDEYAGCMYYYTNEFDFCRKEQQAFEEACPISE 110


>gb|ACG47288.1| NADH-ubiquinone oxidoreductase 19 kDa subunit [Zea mays]
          Length = 110

 Score =  186 bits (471), Expect = 5e-45
 Identities = 85/107 (79%), Positives = 94/107 (87%)
 Frame = -3

Query: 581 ASSSVDAAGEPIPTSSVLMAASKHIAVRCRSENMAFITCKKKDANPEKCLDKGRQVTACV 402
           +S+ VDA+GEPIPTSSVLMAASKHIAVRCR EN+AF+ CKKKD NPEKCL+KGRQVT CV
Sbjct: 4   SSTPVDASGEPIPTSSVLMAASKHIAVRCRPENVAFLNCKKKDPNPEKCLEKGRQVTRCV 63

Query: 401 VNLLKSLHQKCPKEMDAYASCMYYNTNEFDMCRKEQHEFEAACPVSE 261
           ++LLK LHQKCPKEMD YA CMYY TNEFD CRKEQ  FE ACP+SE
Sbjct: 64  LSLLKELHQKCPKEMDEYAGCMYYYTNEFDFCRKEQQAFEEACPISE 110


>ref|NP_001169034.1| uncharacterized protein LOC100382870 [Zea mays]
           gi|223974567|gb|ACN31471.1| unknown [Zea mays]
          Length = 110

 Score =  184 bits (468), Expect = 1e-44
 Identities = 84/107 (78%), Positives = 94/107 (87%)
 Frame = -3

Query: 581 ASSSVDAAGEPIPTSSVLMAASKHIAVRCRSENMAFITCKKKDANPEKCLDKGRQVTACV 402
           +S+ VDA GEPIPTSSVLMAASKHIAVRCR EN+AF+ CKKKD NPEKCL+KGRQVT+CV
Sbjct: 4   SSTPVDALGEPIPTSSVLMAASKHIAVRCRPENVAFLNCKKKDPNPEKCLEKGRQVTSCV 63

Query: 401 VNLLKSLHQKCPKEMDAYASCMYYNTNEFDMCRKEQHEFEAACPVSE 261
           ++LLK LHQKCPKEMD YA CMYY TNEFD CRKEQ  FE +CP+SE
Sbjct: 64  LSLLKELHQKCPKEMDEYAGCMYYYTNEFDFCRKEQQAFEESCPISE 110


>ref|NP_001049824.2| Os03g0295500 [Oryza sativa Japonica Group]
           gi|108707638|gb|ABF95433.1| CHCH domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|215768658|dbj|BAH00887.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218192614|gb|EEC75041.1| hypothetical protein
           OsI_11140 [Oryza sativa Indica Group]
           gi|222624743|gb|EEE58875.1| hypothetical protein
           OsJ_10476 [Oryza sativa Japonica Group]
           gi|255674432|dbj|BAF11738.2| Os03g0295500 [Oryza sativa
           Japonica Group]
          Length = 110

 Score =  184 bits (468), Expect = 1e-44
 Identities = 84/107 (78%), Positives = 95/107 (88%)
 Frame = -3

Query: 581 ASSSVDAAGEPIPTSSVLMAASKHIAVRCRSENMAFITCKKKDANPEKCLDKGRQVTACV 402
           +S+ VDA+G+PIPTSSVLMAASKHIAVRCR EN+AF+ CKKKD NP+KCL+KGRQV  CV
Sbjct: 4   SSAPVDASGDPIPTSSVLMAASKHIAVRCRPENVAFLNCKKKDPNPQKCLEKGRQVKRCV 63

Query: 401 VNLLKSLHQKCPKEMDAYASCMYYNTNEFDMCRKEQHEFEAACPVSE 261
            +LLK LHQKCPKEMDAYA CMYY TNEFD CRKEQ +FE+ACPVSE
Sbjct: 64  FDLLKELHQKCPKEMDAYAGCMYYYTNEFDFCRKEQQDFESACPVSE 110


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