BLASTX nr result
ID: Dioscorea21_contig00005214
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00005214 (497 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAH82659.1| tubulin beta chain [Lotus japonicus] 244 7e-63 ref|XP_003594596.1| Tubulin beta chain [Medicago truncatula] gi|... 244 7e-63 sp|Q9ZRB0.1|TBB3_WHEAT RecName: Full=Tubulin beta-3 chain; AltNa... 243 1e-62 ref|XP_003569962.1| PREDICTED: tubulin beta-3 chain-like [Brachy... 243 1e-62 gb|AEE98362.1| beta-tubulin [Deschampsia antarctica] 243 1e-62 >dbj|BAH82659.1| tubulin beta chain [Lotus japonicus] Length = 446 Score = 244 bits (622), Expect = 7e-63 Identities = 125/165 (75%), Positives = 126/165 (76%) Frame = -1 Query: 497 DNEALYDICFRTLKLATPTFGDLNHLISATMSGITCCLRFPGQLNSXXXXXXXXXXXXXX 318 DNEALYDICFRTLKLATPTFGDLNHLISATMSG+TCCLRFPGQLNS Sbjct: 203 DNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262 Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 138 RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY Sbjct: 263 LHFFMVGFAPLTS------------RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 310 Query: 137 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 3 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD Sbjct: 311 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 355 >ref|XP_003594596.1| Tubulin beta chain [Medicago truncatula] gi|355483644|gb|AES64847.1| Tubulin beta chain [Medicago truncatula] Length = 445 Score = 244 bits (622), Expect = 7e-63 Identities = 125/165 (75%), Positives = 126/165 (76%) Frame = -1 Query: 497 DNEALYDICFRTLKLATPTFGDLNHLISATMSGITCCLRFPGQLNSXXXXXXXXXXXXXX 318 DNEALYDICFRTLKLATPTFGDLNHLISATMSG+TCCLRFPGQLNS Sbjct: 203 DNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262 Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 138 RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY Sbjct: 263 LHFFMVGFAPLTS------------RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 310 Query: 137 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 3 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD Sbjct: 311 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 355 >sp|Q9ZRB0.1|TBB3_WHEAT RecName: Full=Tubulin beta-3 chain; AltName: Full=Beta-3-tubulin gi|4098323|gb|AAD10489.1| beta-tubulin 3 [Triticum aestivum] Length = 445 Score = 243 bits (620), Expect = 1e-62 Identities = 124/165 (75%), Positives = 126/165 (76%) Frame = -1 Query: 497 DNEALYDICFRTLKLATPTFGDLNHLISATMSGITCCLRFPGQLNSXXXXXXXXXXXXXX 318 DNEALYDICFRTLKLATPTFGDLNHLISATMSG+TCCLRFPGQLNS Sbjct: 203 DNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262 Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 138 RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY Sbjct: 263 LHFFMVGFAPLTS------------RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 310 Query: 137 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 3 LTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCD Sbjct: 311 LTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCD 355 >ref|XP_003569962.1| PREDICTED: tubulin beta-3 chain-like [Brachypodium distachyon] Length = 445 Score = 243 bits (620), Expect = 1e-62 Identities = 124/165 (75%), Positives = 126/165 (76%) Frame = -1 Query: 497 DNEALYDICFRTLKLATPTFGDLNHLISATMSGITCCLRFPGQLNSXXXXXXXXXXXXXX 318 DNEALYDICFRTLKLATPTFGDLNHLISATMSG+TCCLRFPGQLNS Sbjct: 203 DNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262 Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 138 RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY Sbjct: 263 LHFFMVGFAPLTS------------RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 310 Query: 137 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 3 LTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCD Sbjct: 311 LTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCD 355 >gb|AEE98362.1| beta-tubulin [Deschampsia antarctica] Length = 304 Score = 243 bits (620), Expect = 1e-62 Identities = 124/165 (75%), Positives = 126/165 (76%) Frame = -1 Query: 497 DNEALYDICFRTLKLATPTFGDLNHLISATMSGITCCLRFPGQLNSXXXXXXXXXXXXXX 318 DNEALYDICFRTLKLATPTFGDLNHLISATMSG+TCCLRFPGQLNS Sbjct: 61 DNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 120 Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 138 RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY Sbjct: 121 LHFFMVGFAPLTS------------RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 168 Query: 137 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 3 LTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCD Sbjct: 169 LTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCD 213