BLASTX nr result

ID: Dioscorea21_contig00005214 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005214
         (497 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH82659.1| tubulin beta chain [Lotus japonicus]                  244   7e-63
ref|XP_003594596.1| Tubulin beta chain [Medicago truncatula] gi|...   244   7e-63
sp|Q9ZRB0.1|TBB3_WHEAT RecName: Full=Tubulin beta-3 chain; AltNa...   243   1e-62
ref|XP_003569962.1| PREDICTED: tubulin beta-3 chain-like [Brachy...   243   1e-62
gb|AEE98362.1| beta-tubulin [Deschampsia antarctica]                  243   1e-62

>dbj|BAH82659.1| tubulin beta chain [Lotus japonicus]
          Length = 446

 Score =  244 bits (622), Expect = 7e-63
 Identities = 125/165 (75%), Positives = 126/165 (76%)
 Frame = -1

Query: 497 DNEALYDICFRTLKLATPTFGDLNHLISATMSGITCCLRFPGQLNSXXXXXXXXXXXXXX 318
           DNEALYDICFRTLKLATPTFGDLNHLISATMSG+TCCLRFPGQLNS              
Sbjct: 203 DNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262

Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 138
                                    RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY
Sbjct: 263 LHFFMVGFAPLTS------------RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 310

Query: 137 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 3
           LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 311 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 355


>ref|XP_003594596.1| Tubulin beta chain [Medicago truncatula]
           gi|355483644|gb|AES64847.1| Tubulin beta chain [Medicago
           truncatula]
          Length = 445

 Score =  244 bits (622), Expect = 7e-63
 Identities = 125/165 (75%), Positives = 126/165 (76%)
 Frame = -1

Query: 497 DNEALYDICFRTLKLATPTFGDLNHLISATMSGITCCLRFPGQLNSXXXXXXXXXXXXXX 318
           DNEALYDICFRTLKLATPTFGDLNHLISATMSG+TCCLRFPGQLNS              
Sbjct: 203 DNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262

Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 138
                                    RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY
Sbjct: 263 LHFFMVGFAPLTS------------RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 310

Query: 137 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 3
           LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 311 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 355


>sp|Q9ZRB0.1|TBB3_WHEAT RecName: Full=Tubulin beta-3 chain; AltName: Full=Beta-3-tubulin
           gi|4098323|gb|AAD10489.1| beta-tubulin 3 [Triticum
           aestivum]
          Length = 445

 Score =  243 bits (620), Expect = 1e-62
 Identities = 124/165 (75%), Positives = 126/165 (76%)
 Frame = -1

Query: 497 DNEALYDICFRTLKLATPTFGDLNHLISATMSGITCCLRFPGQLNSXXXXXXXXXXXXXX 318
           DNEALYDICFRTLKLATPTFGDLNHLISATMSG+TCCLRFPGQLNS              
Sbjct: 203 DNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262

Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 138
                                    RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY
Sbjct: 263 LHFFMVGFAPLTS------------RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 310

Query: 137 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 3
           LTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 311 LTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCD 355


>ref|XP_003569962.1| PREDICTED: tubulin beta-3 chain-like [Brachypodium distachyon]
          Length = 445

 Score =  243 bits (620), Expect = 1e-62
 Identities = 124/165 (75%), Positives = 126/165 (76%)
 Frame = -1

Query: 497 DNEALYDICFRTLKLATPTFGDLNHLISATMSGITCCLRFPGQLNSXXXXXXXXXXXXXX 318
           DNEALYDICFRTLKLATPTFGDLNHLISATMSG+TCCLRFPGQLNS              
Sbjct: 203 DNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 262

Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 138
                                    RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY
Sbjct: 263 LHFFMVGFAPLTS------------RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 310

Query: 137 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 3
           LTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 311 LTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCD 355


>gb|AEE98362.1| beta-tubulin [Deschampsia antarctica]
          Length = 304

 Score =  243 bits (620), Expect = 1e-62
 Identities = 124/165 (75%), Positives = 126/165 (76%)
 Frame = -1

Query: 497 DNEALYDICFRTLKLATPTFGDLNHLISATMSGITCCLRFPGQLNSXXXXXXXXXXXXXX 318
           DNEALYDICFRTLKLATPTFGDLNHLISATMSG+TCCLRFPGQLNS              
Sbjct: 61  DNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPR 120

Query: 317 XXXXXXXXXXXXXXXXXXXXXXXXXRGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 138
                                    RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY
Sbjct: 121 LHFFMVGFAPLTS------------RGSQQYRALTVPELTQQMWDSKNMMCAADPRHGRY 168

Query: 137 LTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 3
           LTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 169 LTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCD 213


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