BLASTX nr result

ID: Dioscorea21_contig00005154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005154
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002448451.1| hypothetical protein SORBIDRAFT_06g027320 [S...    56   3e-06

>ref|XP_002448451.1| hypothetical protein SORBIDRAFT_06g027320 [Sorghum bicolor]
           gi|241939634|gb|EES12779.1| hypothetical protein
           SORBIDRAFT_06g027320 [Sorghum bicolor]
          Length = 123

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
 Frame = +1

Query: 139 KHGSRRSMQEKVTYEKEVEEQSRVPATLPDDVLELGAGTTRPDKPWTPNPNTGVFGPSDX 318
           K  S R       Y+K +E+Q R PA +PDDV+  GAG   PDK W+P+P TGVFGP+  
Sbjct: 24  KAASPRRAVHASAYDKNLEDQVR-PAFVPDDVIGGGAGN--PDKYWSPHPTTGVFGPAAV 80

Query: 319 XXXXXXXA----------------DQPVFSRPLDILDDEP 390
                  A                DQ V+ RPL+ ++  P
Sbjct: 81  DPKLAAAAGAPDAAAANAAGGTVLDQKVWFRPLEDVEKPP 120


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