BLASTX nr result

ID: Dioscorea21_contig00005100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005100
         (1914 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein lig...   326   1e-86
emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]   325   2e-86
emb|CBI23000.3| unnamed protein product [Vitis vinifera]              325   3e-86
ref|XP_002516937.1| nucleotide binding protein, putative [Ricinu...   278   3e-72
ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|2...   251   5e-64

>ref|XP_002269707.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1339

 Score =  326 bits (836), Expect = 1e-86
 Identities = 213/594 (35%), Positives = 314/594 (52%), Gaps = 46/594 (7%)
 Frame = -2

Query: 1646 MASVSNPQPSPTPFHLHQKLDLESIHKLITLVDHHIINFLSDSVARKSLQLKCSAKLSIE 1467
            MAS+S+   S    H H++LDL+SI  L+  V+HHI  FL+++  RKSL+L+CS KL I+
Sbjct: 1    MASISSSFSSLASTHDHERLDLQSIRALVVSVNHHIHEFLANNETRKSLKLRCSLKLRIQ 60

Query: 1466 NHNYFEFSEHSVLSNLYWGVENIEIAIQSECLDEKNHRLVESEKMLQIPALLEDNGSTAG 1287
               +FEFSEHSV+SNLYWG+E++E AI+++  +EK  RL  SE+MLQ+PALL++ G+T G
Sbjct: 61   KQEFFEFSEHSVISNLYWGIESVEAAIRAKWPEEKTSRLKNSEQMLQVPALLDEQGTTGG 120

Query: 1286 VSNQYIICCSYFYLSLVRKLRGDQWQMTIHFLQCFLVSAQWVRTELELELDSWEALFGST 1107
            +SN+YI+CCSYFYLS+VRKL+ D+WQ+ +HFLQ  +VS + ++TE    L     L  S 
Sbjct: 121  ISNRYIVCCSYFYLSIVRKLQRDEWQVALHFLQALMVSPRLIQTEFAPGLCENLFLTHSI 180

Query: 1106 TYRGNVEAID---------------EAARLQARRYKDWLMYYQVVSYGELPESSRNF--- 981
            + R NV                   EA R  A+RYK WLMYYQV+ YGE P+    +   
Sbjct: 181  SERQNVGGRSFRSVSLMNSDEGKPGEAIRETAKRYKSWLMYYQVMQYGETPQRPGGYNDI 240

Query: 980  ----------MITGNSESVK-------GTLNQSVSHDAKMVYQLELQEYI---------K 879
                       + G S S K       G  +     + + V+ L+ QE I          
Sbjct: 241  LSPVDQSPYNSMYGKSSSTKSSSSIAHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKA 300

Query: 878  RESFTEMEDGRDLMKNFNGSHHLDVKEAFDMRRLQEMLEDSQSDTSGSFYSNIDSTEATD 699
                TE++D R  + N +     D+K + +++ LQ++L +SQSDT  S  S  D+  A  
Sbjct: 301  SRDNTEIQDYRKALNNSDQVSRQDIKRSSNIKCLQDILMESQSDTPTSDDSFDDNDSADG 360

Query: 698  SEEQLQNEGSPAEVLSANSDVFAPKLXXXXXXXXXXXXDYSDKCIAEMSTYLNNHEVNEV 519
              E   +E          S + A ++             + + C    S    + E+NE 
Sbjct: 361  DSEAYADE--------TQSSMEAARIKADQGRMEISDQRFQNSCCISTSFPPLHEEINEA 412

Query: 518  NASLLPSRKSQSSLDKLCLPMLSLRDVESHHFSKCNFEDWVPSARSPTREIRCFSNFPSK 339
            N   L S +   SL+ L L +L L   +SH    C+ ++     R    + +      + 
Sbjct: 413  NIKKLFSGRFSRSLNDLNLSILELGVEKSHTLWSCHAQEETTWRRLEPDDFQILDCLAAT 472

Query: 338  FLKKCSIPEFV-QRGNFTKKRLNLSNSDKDWSEESSNYEKDTRIELLGRFEKAMEMLCFS 162
             L+     +    +GN  +K+ N S+  K+  E   + EKD+  ELL   +KA+  L FS
Sbjct: 473  SLQNYMFAQMEHNQGNGARKKHN-SSRRKNLHEVCLHPEKDSHGELLRALDKAISKLWFS 531

Query: 161  EGRGK-SEDAGLEVLAVWEMLNNKSEVNYTSLKHVILHQLLEIISASKRENLIR 3
            EG+GK  ED+ +EV  ++EML NK+ V YT LK  IL QLL  IS SK+E ++R
Sbjct: 532  EGQGKYDEDSSVEVTTIYEMLTNKTGVKYTLLKDAILDQLLSSISTSKKEGIVR 585


>emb|CAN65866.1| hypothetical protein VITISV_010257 [Vitis vinifera]
          Length = 1378

 Score =  325 bits (834), Expect = 2e-86
 Identities = 213/594 (35%), Positives = 313/594 (52%), Gaps = 46/594 (7%)
 Frame = -2

Query: 1646 MASVSNPQPSPTPFHLHQKLDLESIHKLITLVDHHIINFLSDSVARKSLQLKCSAKLSIE 1467
            MAS+S+   S    H H++LDL+SI  L+  V+HHI  FL+++  RKSL+L+CS KL I+
Sbjct: 1    MASISSSFSSLASTHDHERLDLQSIRALVVSVNHHIHEFLANNETRKSLKLRCSLKLRIQ 60

Query: 1466 NHNYFEFSEHSVLSNLYWGVENIEIAIQSECLDEKNHRLVESEKMLQIPALLEDNGSTAG 1287
               +FEFSEHSV+SNLYWG+E++E AI+++  +EK  RL  SE+MLQ+PALL++ G+T G
Sbjct: 61   KQEFFEFSEHSVISNLYWGIESVEAAIRAKWPEEKTSRLKNSEQMLQVPALLDEQGTTGG 120

Query: 1286 VSNQYIICCSYFYLSLVRKLRGDQWQMTIHFLQCFLVSAQWVRTELELELDSWEALFGST 1107
            +SN+YI+CCSYFYLS+VRKL+ D+WQ+ +HFLQ  +VS + ++TE    L     L  S 
Sbjct: 121  ISNRYIVCCSYFYLSIVRKLQRDEWQVALHFLQALMVSPRLIQTEFAPGLCENLFLTHSI 180

Query: 1106 TYRGNVEAID---------------EAARLQARRYKDWLMYYQVVSYGELPESSRNF--- 981
            + R NV                   EA R  A+RYK WLMYYQV+ YGE P+    +   
Sbjct: 181  SERQNVGGRSFRSVSLMNSDEGKPGEAIRETAKRYKSWLMYYQVMQYGETPQRPGGYNDI 240

Query: 980  ----------MITGNSESVK-------GTLNQSVSHDAKMVYQLELQEYI---------K 879
                         G S S K       G  +     + + V+ L+ QE I          
Sbjct: 241  LSPVDQSPYNSXYGKSSSTKSSSSIAHGNTSLQTYRNFQKVHPLDPQESIIDSTGDKAKA 300

Query: 878  RESFTEMEDGRDLMKNFNGSHHLDVKEAFDMRRLQEMLEDSQSDTSGSFYSNIDSTEATD 699
                TE++D R  + N +     D+K + +++ LQ++L +SQSDT  S  S  D+  A  
Sbjct: 301  SRDNTEIQDYRKALNNSDQVSRQDIKRSSNIKCLQDILMESQSDTPTSDDSFDDNDSADG 360

Query: 698  SEEQLQNEGSPAEVLSANSDVFAPKLXXXXXXXXXXXXDYSDKCIAEMSTYLNNHEVNEV 519
              E   +E          S + A ++             + + C    S    + E+NE 
Sbjct: 361  DSEAYADE--------TQSSMEAARIKADQGRMEISDQRFQNSCCISTSFPPLHEEINEA 412

Query: 518  NASLLPSRKSQSSLDKLCLPMLSLRDVESHHFSKCNFEDWVPSARSPTREIRCFSNFPSK 339
            N   L S +   SL+ L L +L L   +SH    C+ ++     R    + +      + 
Sbjct: 413  NIKKLFSGRFSRSLNDLNLSILELGVEKSHTLWSCHAQEETTWRRLEPDDFQILDCLAAT 472

Query: 338  FLKKCSIPEFV-QRGNFTKKRLNLSNSDKDWSEESSNYEKDTRIELLGRFEKAMEMLCFS 162
             L+     +    +GN  +K+ N S+  K+  E   + EKD+  ELL   +KA+  L FS
Sbjct: 473  SLQNYMFAQMEHNQGNGARKKHN-SSRRKNLHEVCLHPEKDSHGELLRALDKAISKLWFS 531

Query: 161  EGRGK-SEDAGLEVLAVWEMLNNKSEVNYTSLKHVILHQLLEIISASKRENLIR 3
            EG+GK  ED+ +EV  ++EML NK+ V YT LK  IL QLL  IS SK+E ++R
Sbjct: 532  EGQGKYDEDSSVEVTTIYEMLTNKTGVKYTLLKDAILDQLLSSISTSKKEGIVR 585


>emb|CBI23000.3| unnamed protein product [Vitis vinifera]
          Length = 1274

 Score =  325 bits (832), Expect = 3e-86
 Identities = 204/550 (37%), Positives = 305/550 (55%), Gaps = 2/550 (0%)
 Frame = -2

Query: 1646 MASVSNPQPSPTPFHLHQKLDLESIHKLITLVDHHIINFLSDSVARKSLQLKCSAKLSIE 1467
            MAS+S+   S    H H++LDL+SI  L+  V+HHI  FL+++  RKSL+L+CS KL I+
Sbjct: 1    MASISSSFSSLASTHDHERLDLQSIRALVVSVNHHIHEFLANNETRKSLKLRCSLKLRIQ 60

Query: 1466 NHNYFEFSEHSVLSNLYWGVENIEIAIQSECLDEKNHRLVESEKMLQIPALLEDNGSTAG 1287
               +FEFSEHSV+SNLYWG+E++E AI+++  +EK  RL  SE+MLQ+PALL++ G+T G
Sbjct: 61   KQEFFEFSEHSVISNLYWGIESVEAAIRAKWPEEKTSRLKNSEQMLQVPALLDEQGTTGG 120

Query: 1286 VSNQYIICCSYFYLSLVRKLRGDQWQMTIHFLQCFLVSAQWVRTELELELDSWEALFGST 1107
            +SN+YI+CCSYFYLS+VRKL+ D+WQ+ +HFLQ  +VS + ++TE    L     L  S 
Sbjct: 121  ISNRYIVCCSYFYLSIVRKLQRDEWQVALHFLQALMVSPRLIQTEFAPGLCENLFLTHSI 180

Query: 1106 TYRGNVEAIDEAARLQARRYKDWLMYYQVVSYGELPESSRNFMITGNSESVKGTLNQSVS 927
            + R NV     A R  A+RYK WLMYYQV+ YGE P+               G  N  +S
Sbjct: 181  SERQNV-----AIRETAKRYKSWLMYYQVMQYGETPQR-------------PGGYNDILS 222

Query: 926  HDAKMVYQLELQEYIKRESFTEMEDGRDLMKNFNGSHHLDVKEAFDMRRLQEMLEDSQSD 747
                +  Q+  +  +   ++  ++D R  + N +     D+K + +++ LQ++L +SQSD
Sbjct: 223  ---PLYTQMTKKISLFAGNYRIIQDYRKALNNSDQVSRQDIKRSSNIKCLQDILMESQSD 279

Query: 746  TSGSFYSNIDSTEATDSEEQLQNEGSPAEVLSANSDVFAPKLXXXXXXXXXXXXDYSDKC 567
            T  S  S  D+  A    E   +E          S + A ++             + + C
Sbjct: 280  TPTSDDSFDDNDSADGDSEAYADE--------TQSSMEAARIKADQGRMEISDQRFQNSC 331

Query: 566  IAEMSTYLNNHEVNEVNASLLPSRKSQSSLDKLCLPMLSLRDVESHHFSKCNFEDWVPSA 387
                S    + E+NE N   L S +   SL+ L L +L L   +SH    C+ ++     
Sbjct: 332  CISTSFPPLHEEINEANIKKLFSGRFSRSLNDLNLSILELGVEKSHTLWSCHAQEETTWR 391

Query: 386  RSPTREIRCFSNFPSKFLKKCSIPEFV-QRGNFTKKRLNLSNSDKDWSEESSNYEKDTRI 210
            R    + +      +  L+     +    +GN  +K+ N S+  K+  E   + EKD+  
Sbjct: 392  RLEPDDFQILDCLAATSLQNYMFAQMEHNQGNGARKKHN-SSRRKNLHEVCLHPEKDSHG 450

Query: 209  ELLGRFEKAMEMLCFSEGRGK-SEDAGLEVLAVWEMLNNKSEVNYTSLKHVILHQLLEII 33
            ELL   +KA+  L FSEG+GK  ED+ +EV  ++EML NK+ V YT LK  IL QLL  I
Sbjct: 451  ELLRALDKAISKLWFSEGQGKYDEDSSVEVTTIYEMLTNKTGVKYTLLKDAILDQLLSSI 510

Query: 32   SASKRENLIR 3
            S SK+E ++R
Sbjct: 511  STSKKEGIVR 520


>ref|XP_002516937.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223544025|gb|EEF45551.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 1357

 Score =  278 bits (712), Expect = 3e-72
 Identities = 206/613 (33%), Positives = 314/613 (51%), Gaps = 65/613 (10%)
 Frame = -2

Query: 1646 MASVSNPQPSPTPFHLHQKLDLESIHKLITLVDHHIINFLSDSVARKSLQLKCSAKLSIE 1467
            MAS S+   SP   H +++  LES+  L+  V+ +    L++     +L+  C +KL+I 
Sbjct: 1    MASSSSFSCSPLS-HDYERPGLESVKSLVISVNEYCFELLANGELWNALKSLCISKLNIR 59

Query: 1466 NHNYFEFSEHSVLSNLYWGVENIEIAIQSECLDEKNHRLVESEKMLQIPALLEDNGSTAG 1287
            N  +FEFSEHSV+SNLYWG+E++E A++++C++EK +RL  SE+MLQ PALL+++G TAG
Sbjct: 60   NQEFFEFSEHSVVSNLYWGIESVEAAVRAKCVEEKANRLKSSERMLQAPALLDEHGVTAG 119

Query: 1286 VSNQYIICCSYFYLSLVRKLRGDQWQMTIHFLQCFLVSAQWVRTELE------------- 1146
            + N Y++CCSYFYLS++RKL+ D+WQ+ +HFLQ  LVS ++VR EL              
Sbjct: 120  IQNHYLVCCSYFYLSMIRKLQNDEWQVALHFLQAMLVSPRFVRAELAPEFCASLFPVSGV 179

Query: 1145 LELDSWEALFG--STTYRGNVEAIDEAARLQARRYKDWLMYYQVVSYGELP--------- 999
            LE+++     G  S T   N   I++A R  ARRYK WL YYQV+ YGE P         
Sbjct: 180  LEVETMCGKKGKESVTDFLNEANINDAIREIARRYKHWLTYYQVMLYGETPQWHCRSSYN 239

Query: 998  ESSRNFMITGNSESVKGTLNQ---SVSHDAKMVYQLELQEYIKRESFTEMEDGRDL---- 840
            + S++F    NS      + Q   S ++  + V+ L+ + Y   +   + +  R++    
Sbjct: 240  DESQDFWQVSNSSDSSELIEQERCSQTYKHEKVHPLDSKAYPANDKADKPKTCREIQEIG 299

Query: 839  -----MKNFNGSHHLDVKEA-----FDMRRLQEMLEDSQSDTSGSFYSNID-STEATDSE 693
                 + +FN S  L ++         ++RLQE+L DSQSDT  S  S      E  D+E
Sbjct: 300  HDSEALNHFNQSLELKIRTTKQENYTSIKRLQEVLMDSQSDTPTSVNSCCSYYLEEVDAE 359

Query: 692  EQLQNEGSPAEVLSANSDVFAPK--------------------LXXXXXXXXXXXXDYSD 573
             ++ +      + +A  D   P+                    L            D   
Sbjct: 360  VKMADNN--CSIRNAGEDDLQPEVCAQLCQNKKLQTVLLITQALRRVTLQAACLTLDEMC 417

Query: 572  KCIAEMSTYLNNHEVNEVNASLLPSRKSQSSLDKLCLPMLSLRDVESHHFSKCNFEDWVP 393
            + +   ST     EV+EV  S + S +  SS     L +L LR+       K N  D   
Sbjct: 418  RMVLLSSTTQEVQEVSEVKISSISSSRYPSSTCDFDLSILELRN------KKFNVLD-CD 470

Query: 392  SARSP--TREIRCFSNFPSKFLKKCSIPEFVQRGNFTKKRLNLSNSDKDWSEESSNYEKD 219
            SA+ P    + +  +   +  L+   + E  +     + + NL +S K+ +E   N  KD
Sbjct: 471  SAQRPLWQHQAQVTNEEATAALQNGMLAEIDRSRRAIRGKQNL-HSQKNLNELYLNSGKD 529

Query: 218  TRIELLGRFEKAMEMLCFSEGRGK-SEDAGLEVLAVWEMLNNKSEVNYTSLKHVILHQLL 42
               EL+   EKA+  LCFSEG  K  ED  +EV A++E+LN+K  + YT LK +IL QLL
Sbjct: 530  PNTELMAILEKAISRLCFSEGLAKCEEDYAVEVTAIYELLNSKKGIKYTILKDIILDQLL 589

Query: 41   EIISASKRENLIR 3
              IS+SK E ++R
Sbjct: 590  TAISSSKEETVVR 602


>ref|XP_002328632.1| predicted protein [Populus trichocarpa] gi|222838614|gb|EEE76979.1|
            predicted protein [Populus trichocarpa]
          Length = 1305

 Score =  251 bits (641), Expect = 5e-64
 Identities = 188/582 (32%), Positives = 286/582 (49%), Gaps = 48/582 (8%)
 Frame = -2

Query: 1604 HLHQKLDLESIHKLITLVDHHIINFLSDSVARKSLQLKCSAKLS-IENHNYFEFSEHSVL 1428
            H H++ DLESI  ++  ++ ++I FL +  +  SL+ +C++ L+ I+N  +FEFSEHSVL
Sbjct: 13   HDHERPDLESIRGIVDSINEYMIGFLENVESWNSLKSQCTSMLNTIQNQKFFEFSEHSVL 72

Query: 1427 SNLYWGVENIEIAIQSECLDEKNHRLVESEKMLQIPALLEDNGSTAGVSNQYIICCSYFY 1248
            SNLYWG+E+IE AIQ++  +EK   L  SE++LQ+PALL+++G TAG+ NQ+++C SYFY
Sbjct: 73   SNLYWGIESIEAAIQAKFPEEKTDHLRNSERLLQVPALLDEHGVTAGIQNQFLVCFSYFY 132

Query: 1247 LSLVRKLRGDQWQMTIHFLQCFLVSAQWVRTELELE-------LDSWEALFGSTTYRGNV 1089
            LS ++KL+ D+WQ+ +H+LQ  LVS + VRTE   E       L +   +   +++    
Sbjct: 133  LSAIKKLQNDEWQVALHYLQAMLVSPRLVRTEFAPEFCRVLFPLSNKSEIEDESSWDFGE 192

Query: 1088 EAIDEAARLQARRYKDWLMYYQVVSYGELPESSRNFMITGNSESVKGTLNQSVSHDAKMV 909
            +  DEA R  ARRYK WLMY Q++ +GE     R+      + S     +Q +SH  K  
Sbjct: 193  DNTDEAIRQIARRYKHWLMYCQIMLHGETSGHCRS-----RNTSSPDKESQDLSHVMKSS 247

Query: 908  YQLE--------LQEYIKRESFTEMEDGRDLMKN--------------------FNGSHH 813
              L         L  Y K+    E     DL  N                     N   H
Sbjct: 248  SDLSNSVKQGHCLHNYHKKLMQYEKVHPLDLQGNRIEGTANEPMSNDIQEFQYYSNALKH 307

Query: 812  LD-----------VKEAFDMRRLQEMLEDSQSDTSGSFYSNIDSTEATDSEEQLQNEGSP 666
            LD           +++   +RRL+E+L + + D+     +++ S ++ D EE   N  +P
Sbjct: 308  LDQVPKVNIQNANLEKCKSIRRLEEILMEGELDSP----TSVSSCDSYDLEE--HNSEAP 361

Query: 665  AEVLSANSDVFAPKLXXXXXXXXXXXXDYSDKCIAEMSTYLNNHEVNEVNASLLPSRKSQ 486
               + + S                     + K +   S +    E +EVN   L S +  
Sbjct: 362  CSTVHSMS---------------------TTKILPHASQHRMREEASEVNIDDLFSERFL 400

Query: 485  SSLDKLCLPMLSLRDVESHHFSKCNFEDWVPSARSPTREIRCFSNFPSKFLKKCSIPEFV 306
            SS+  L L +L L         K +   W                  +  LKK S     
Sbjct: 401  SSVSDLDLRVLELG-------GKRSDIQW------------------NSHLKKSSQKLVQ 435

Query: 305  QRGNFTKKRLNLSNSDKDWSEESSNYEKDTRIELLGRFEKAMEMLCFSEGRGK-SEDAGL 129
             R   TK+     +S +++++   +Y +D+  E +G  EK +  LCFSEG  K  ED   
Sbjct: 436  HRAIATKQD---PHSRENFNKFCVHYRRDSSAEFIGDIEKVISKLCFSEGLAKFDEDYAG 492

Query: 128  EVLAVWEMLNNKSEVNYTSLKHVILHQLLEIISASKRENLIR 3
            EV+ +++MLNNK  V YT LK V+L QLL  IS SK E +IR
Sbjct: 493  EVMTIYKMLNNKRGVKYTMLKDVMLDQLLTAISTSKEERVIR 534


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