BLASTX nr result

ID: Dioscorea21_contig00005099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005099
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK02103.1| predicted protein [Hordeum vulgare subsp. vulgar...    62   5e-08
dbj|BAJ90502.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   5e-08
ref|XP_002451629.1| hypothetical protein SORBIDRAFT_04g004860 [S...    60   2e-07
ref|NP_001046037.1| Os02g0173200 [Oryza sativa Japonica Group] g...    60   3e-07
ref|XP_002323172.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07

>dbj|BAK02103.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326502486|dbj|BAJ95306.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326514294|dbj|BAJ96134.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326514300|dbj|BAJ96137.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326514316|dbj|BAJ96145.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326530206|dbj|BAJ97529.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 224

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/74 (50%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +1

Query: 28  TGSISNIEG-RVGXXXXXXXXXXXXXXTTLLNTDTTNFRAMVQQFTGIPSAPYSSSAIQT 204
           T S   +EG RVG               TLLNTDTTNFRAMVQQFTGIPS PY  +    
Sbjct: 46  TRSAPGVEGGRVGKPARRRSRASRRAPVTLLNTDTTNFRAMVQQFTGIPSGPYGPAG--A 103

Query: 205 NGPPFINFGLGIND 246
            G P I+F  G  D
Sbjct: 104 GGGPVISFSAGGGD 117


>dbj|BAJ90502.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 235

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/74 (50%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = +1

Query: 28  TGSISNIEG-RVGXXXXXXXXXXXXXXTTLLNTDTTNFRAMVQQFTGIPSAPYSSSAIQT 204
           T S   +EG RVG               TLLNTDTTNFRAMVQQFTGIPS PY  +    
Sbjct: 57  TRSAPGVEGGRVGKPARRRSRASRRAPVTLLNTDTTNFRAMVQQFTGIPSGPYGPAG--A 114

Query: 205 NGPPFINFGLGIND 246
            G P I+F  G  D
Sbjct: 115 GGGPVISFSAGGGD 128


>ref|XP_002451629.1| hypothetical protein SORBIDRAFT_04g004860 [Sorghum bicolor]
           gi|241931460|gb|EES04605.1| hypothetical protein
           SORBIDRAFT_04g004860 [Sorghum bicolor]
          Length = 247

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/62 (53%), Positives = 36/62 (58%)
 Frame = +1

Query: 52  GRVGXXXXXXXXXXXXXXTTLLNTDTTNFRAMVQQFTGIPSAPYSSSAIQTNGPPFINFG 231
           GRVG               TLLNTDT+NFRAMVQQFTGIPS PY  +     G P I+FG
Sbjct: 67  GRVGKPARRRSRASRRAPVTLLNTDTSNFRAMVQQFTGIPSGPYGPAG--PGGGPVISFG 124

Query: 232 LG 237
            G
Sbjct: 125 GG 126


>ref|NP_001046037.1| Os02g0173200 [Oryza sativa Japonica Group]
           gi|49388967|dbj|BAD26184.1| unknown protein [Oryza
           sativa Japonica Group] gi|113535568|dbj|BAF07951.1|
           Os02g0173200 [Oryza sativa Japonica Group]
          Length = 229

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 32/62 (51%), Positives = 38/62 (61%)
 Frame = +1

Query: 52  GRVGXXXXXXXXXXXXXXTTLLNTDTTNFRAMVQQFTGIPSAPYSSSAIQTNGPPFINFG 231
           GRV                TLLNTDT+NFRAMVQQFTGIP+ PY+++A    G P I+FG
Sbjct: 61  GRVAKPARRRSRASRRAPVTLLNTDTSNFRAMVQQFTGIPTPPYATAA--AAGGPVISFG 118

Query: 232 LG 237
            G
Sbjct: 119 AG 120


>ref|XP_002323172.1| predicted protein [Populus trichocarpa] gi|222867802|gb|EEF04933.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 36/75 (48%), Positives = 45/75 (60%)
 Frame = +1

Query: 16  SPKTTGSISNIEGRVGXXXXXXXXXXXXXXTTLLNTDTTNFRAMVQQFTGIPSAPYSSSA 195
           +P ++G +S  EGRV               TTLLNTDTTNFRAMVQQFTG PSAP+++ +
Sbjct: 61  NPSSSGHLSP-EGRVAKPIRRRSRASRRTPTTLLNTDTTNFRAMVQQFTGGPSAPFATGS 119

Query: 196 IQTNGPPFINFGLGI 240
            Q N     NFG  +
Sbjct: 120 -QINA---TNFGYAV 130


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