BLASTX nr result

ID: Dioscorea21_contig00005059 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005059
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53196.1| JHL03K20.5 [Jatropha curcas]                          265   1e-68
ref|NP_001061514.1| Os08g0313200 [Oryza sativa Japonica Group] g...   258   2e-66
ref|XP_002534340.1| conserved hypothetical protein [Ricinus comm...   258   2e-66
ref|XP_003539349.1| PREDICTED: CBS domain-containing protein CBS...   257   4e-66
ref|XP_002306482.1| predicted protein [Populus trichocarpa] gi|2...   254   2e-65

>dbj|BAJ53196.1| JHL03K20.5 [Jatropha curcas]
          Length = 236

 Score =  265 bits (677), Expect = 1e-68
 Identities = 136/215 (63%), Positives = 169/215 (78%)
 Frame = +1

Query: 103 SSSSRPMLAVASRCTVALSMIPPPSVVGLSSVLPRRSRSCVARAGALMTGSPVSRNGSAF 282
           ++++ P+++ A +    LS  P   ++ LS++   R  S +A +GA +  SP S     +
Sbjct: 19  ATATSPIVSFAQQLPCLLSSRPGRRLLPLSAISHPRRSSAIAASGAFVASSPKS---GVY 75

Query: 283 TVRDFMTKKENLVVVKPTTSIDEALQMLVENRITGFPVIDDDWTLVGVVSDYDLLALDSI 462
           TV DFMT+KE+L VVKPTT++DEALQ LVE+RITGFPVIDDDW LVG+VSDYDLLALDSI
Sbjct: 76  TVGDFMTRKEDLQVVKPTTTVDEALQTLVEHRITGFPVIDDDWKLVGLVSDYDLLALDSI 135

Query: 463 SGNGRADTGLFPEVDSTWKTFNEIRKLLSKTYGKVIGDVMTTDPLVVHETMSLEDAARLL 642
           SG GR D  +FPEVDSTWKTFNE++KLLSKT GK++GD+MT  P+VV ET +LEDAARLL
Sbjct: 136 SGGGRTDNSMFPEVDSTWKTFNEVQKLLSKTNGKLVGDLMTPAPVVVRETTNLEDAARLL 195

Query: 643 LQTKYRRLPVVDGAGKLVGLITRGTVVRAALHIQR 747
           L+TKYRRLPVVD  GKLVG+ITRG VVRAAL I+R
Sbjct: 196 LETKYRRLPVVDSEGKLVGIITRGNVVRAALEIKR 230


>ref|NP_001061514.1| Os08g0313200 [Oryza sativa Japonica Group]
           gi|50508236|dbj|BAD31758.1| putative CBS domain
           containing protein [Oryza sativa Japonica Group]
           gi|113623483|dbj|BAF23428.1| Os08g0313200 [Oryza sativa
           Japonica Group] gi|215768507|dbj|BAH00736.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218194170|gb|EEC76597.1| hypothetical protein
           OsI_14449 [Oryza sativa Indica Group]
           gi|222640324|gb|EEE68456.1| hypothetical protein
           OsJ_26849 [Oryza sativa Japonica Group]
           gi|258644543|dbj|BAI39797.1| CBS domain-containing
           protein -like [Oryza sativa Indica Group]
           gi|258644675|dbj|BAI39922.1| CBS domain-containing
           protein -like [Oryza sativa Indica Group]
          Length = 235

 Score =  258 bits (659), Expect = 2e-66
 Identities = 142/218 (65%), Positives = 166/218 (76%)
 Frame = +1

Query: 97  RLSSSSRPMLAVASRCTVALSMIPPPSVVGLSSVLPRRSRSCVARAGALMTGSPVSRNGS 276
           R S  S P LA  +  + A     PPS    +SV P  + + +A  G     S   +N  
Sbjct: 21  RPSLPSEPRLAAPAAGSRA-----PPS---RASVRPSAAAAPLAARGLPHHASVAGQNSG 72

Query: 277 AFTVRDFMTKKENLVVVKPTTSIDEALQMLVENRITGFPVIDDDWTLVGVVSDYDLLALD 456
            +TV DFMTK+E L VVK TTS+DEAL+MLVE+RITGFPVIDD+W LVGVVSDYDLLALD
Sbjct: 73  IYTVGDFMTKREELHVVKSTTSVDEALEMLVEHRITGFPVIDDEWNLVGVVSDYDLLALD 132

Query: 457 SISGNGRADTGLFPEVDSTWKTFNEIRKLLSKTYGKVIGDVMTTDPLVVHETMSLEDAAR 636
           SISGNG A+  +FPEVDSTWKTFNEI+KLLSKT GKVIGDVMT+ PLVV ET +LEDAAR
Sbjct: 133 SISGNGLAEVDIFPEVDSTWKTFNEIQKLLSKTNGKVIGDVMTSAPLVVRETTNLEDAAR 192

Query: 637 LLLQTKYRRLPVVDGAGKLVGLITRGTVVRAALHIQRR 750
           LLL+TKYRRLPVVD +GKLVG+ITRG VVRAAL I+++
Sbjct: 193 LLLETKYRRLPVVDSSGKLVGIITRGNVVRAALKIKKK 230


>ref|XP_002534340.1| conserved hypothetical protein [Ricinus communis]
           gi|223525462|gb|EEF28042.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 239

 Score =  258 bits (658), Expect = 2e-66
 Identities = 132/182 (72%), Positives = 152/182 (83%)
 Frame = +1

Query: 202 PRRSRSCVARAGALMTGSPVSRNGSAFTVRDFMTKKENLVVVKPTTSIDEALQMLVENRI 381
           PRRS S ++  G LM  SP S     +TV DFMT+KE+L VVKPTT++DEALQ LVE+RI
Sbjct: 56  PRRS-STISATGTLMANSPKS---GVYTVGDFMTRKEDLCVVKPTTTVDEALQTLVEHRI 111

Query: 382 TGFPVIDDDWTLVGVVSDYDLLALDSISGNGRADTGLFPEVDSTWKTFNEIRKLLSKTYG 561
           TGFPVIDDDW LVG+VSDYDLLALDSISG GR D  +FPEVDSTWKTFNE++KLLSKT G
Sbjct: 112 TGFPVIDDDWKLVGLVSDYDLLALDSISGGGRTDNSMFPEVDSTWKTFNEVQKLLSKTNG 171

Query: 562 KVIGDVMTTDPLVVHETMSLEDAARLLLQTKYRRLPVVDGAGKLVGLITRGTVVRAALHI 741
           K++GD+MT  P+VV ET +LEDAARLLL+TKYRRLPVVD  GKLVG+ITRG VVRAAL I
Sbjct: 172 KLVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDAEGKLVGIITRGNVVRAALEI 231

Query: 742 QR 747
           +R
Sbjct: 232 KR 233


>ref|XP_003539349.1| PREDICTED: CBS domain-containing protein CBSX1, chloroplastic
           [Glycine max] gi|255632210|gb|ACU16463.1| unknown
           [Glycine max]
          Length = 228

 Score =  257 bits (656), Expect = 4e-66
 Identities = 137/221 (61%), Positives = 167/221 (75%)
 Frame = +1

Query: 97  RLSSSSRPMLAVASRCTVALSMIPPPSVVGLSSVLPRRSRSCVARAGALMTGSPVSRNGS 276
           RL   + P L+ A+   +   +    S    S  LPR   S +  A  L T + VS    
Sbjct: 7   RLHLHNLPPLSSAAHRPLLQPLAAAASFYRSSPPLPRLRLSPLLAANTL-TANDVSPRSG 65

Query: 277 AFTVRDFMTKKENLVVVKPTTSIDEALQMLVENRITGFPVIDDDWTLVGVVSDYDLLALD 456
            +TV DFMTKKE+L VVKPTTS+DEAL++LVENRITGFPVIDD+W LVGVVSDYDLLALD
Sbjct: 66  LYTVGDFMTKKEDLHVVKPTTSVDEALEILVENRITGFPVIDDNWKLVGVVSDYDLLALD 125

Query: 457 SISGNGRADTGLFPEVDSTWKTFNEIRKLLSKTYGKVIGDVMTTDPLVVHETMSLEDAAR 636
           SISG+G  D  +FPEVDSTWKTFNE++KLLSKT GK+IG++MTT P+VV ET +LEDAAR
Sbjct: 126 SISGHGLKDNNMFPEVDSTWKTFNEVQKLLSKTNGKLIGELMTTAPMVVRETTNLEDAAR 185

Query: 637 LLLQTKYRRLPVVDGAGKLVGLITRGTVVRAALHIQRRNSQ 759
           LLL+TK+RRLPVVD  G+LVG+ITRG VVRAALH+++ N +
Sbjct: 186 LLLETKFRRLPVVDAEGRLVGIITRGNVVRAALHMKQANQK 226


>ref|XP_002306482.1| predicted protein [Populus trichocarpa] gi|222855931|gb|EEE93478.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  254 bits (650), Expect = 2e-65
 Identities = 134/196 (68%), Positives = 158/196 (80%), Gaps = 3/196 (1%)
 Frame = +1

Query: 166 PPPSVVGLSSVL-PRRSRSCVARA--GALMTGSPVSRNGSAFTVRDFMTKKENLVVVKPT 336
           P   +V LSS+  PRRS S +A A  G LM  SP S     +TV DFMT+KE+L VVKPT
Sbjct: 9   PGRKLVSLSSISWPRRSPSLIAAASSGTLMANSPKS---GVYTVGDFMTRKEDLHVVKPT 65

Query: 337 TSIDEALQMLVENRITGFPVIDDDWTLVGVVSDYDLLALDSISGNGRADTGLFPEVDSTW 516
           T+++EAL+ LVE RITGFPVIDDDW LVG+VSDYDLLALDSISG GR +T +FPEVDSTW
Sbjct: 66  TTVNEALETLVERRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGRTETNMFPEVDSTW 125

Query: 517 KTFNEIRKLLSKTYGKVIGDVMTTDPLVVHETMSLEDAARLLLQTKYRRLPVVDGAGKLV 696
           KTFNE++ LL+KT GKV+GD+MT  P+VV ET +LED+ RLLL+TKYRRLPVVD  GKLV
Sbjct: 126 KTFNEVQMLLNKTNGKVVGDLMTPAPVVVRETTNLEDSVRLLLETKYRRLPVVDADGKLV 185

Query: 697 GLITRGTVVRAALHIQ 744
           G+ITRG VVRAALHI+
Sbjct: 186 GIITRGNVVRAALHIK 201


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