BLASTX nr result

ID: Dioscorea21_contig00005053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005053
         (855 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]   146   5e-33
ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]   146   5e-33
ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]   146   7e-33
emb|CBI16097.3| unnamed protein product [Vitis vinifera]              146   7e-33
ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]   143   4e-32

>ref|XP_003539618.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1033

 Score =  146 bits (369), Expect = 5e-33
 Identities = 75/125 (60%), Positives = 89/125 (71%), Gaps = 19/125 (15%)
 Frame = +1

Query: 532 QRRQEASASDRERELNICRGGSAPPTVEGSLAAIAGI-------------------KNAN 654
           QRRQEA   DRERELNI R GSAPPTV+GSL+A+ G+                   K+ N
Sbjct: 33  QRRQEAD--DRERELNIFRSGSAPPTVDGSLSAVGGLFAGGGGGGAPAAFSEFRGTKDVN 90

Query: 655 GLLSEEELLSDPAYLSYYYSHVNRNPRLPPPAISKEDWRFSRRFQAGGSSFGGIGDKRKS 834
           G+ SEEEL SDPAYLSYYYS+VN NPRLPPP +SKEDWRF +R + G S+ GGIGD+RK 
Sbjct: 91  GIASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASALGGIGDRRKV 150

Query: 835 SRTDE 849
           +RTD+
Sbjct: 151 NRTDD 155


>ref|XP_003537980.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1047

 Score =  146 bits (369), Expect = 5e-33
 Identities = 76/128 (59%), Positives = 89/128 (69%), Gaps = 22/128 (17%)
 Frame = +1

Query: 532 QRRQEASASDRERELNICRGGSAPPTVEGSLAAIAGI----------------------K 645
           QRRQEA   DRERELNI R GSAPPTVEGSL+A+ G+                      K
Sbjct: 33  QRRQEAD--DRERELNIYRSGSAPPTVEGSLSAVGGLFGGAAGAPATGAPVAFSEFQGTK 90

Query: 646 NANGLLSEEELLSDPAYLSYYYSHVNRNPRLPPPAISKEDWRFSRRFQAGGSSFGGIGDK 825
           + NG+ SEEEL SDPAYLSYYYS+VN NPRLPPP +SKEDWRF +R + G S+ GGIGD+
Sbjct: 91  DVNGITSEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASALGGIGDR 150

Query: 826 RKSSRTDE 849
           RK +RTD+
Sbjct: 151 RKVNRTDD 158


>ref|XP_003539627.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1053

 Score =  146 bits (368), Expect = 7e-33
 Identities = 76/129 (58%), Positives = 89/129 (68%), Gaps = 23/129 (17%)
 Frame = +1

Query: 532 QRRQEASASDRERELNICRGGSAPPTVEGSLAAIAGI----------------------- 642
           QRRQEA   DRERELNI R GSAPPTVEGSL+A+ G+                       
Sbjct: 33  QRRQEAD--DRERELNIFRSGSAPPTVEGSLSAVGGLFAAGGGGGPATGAPAAFLEFRGA 90

Query: 643 KNANGLLSEEELLSDPAYLSYYYSHVNRNPRLPPPAISKEDWRFSRRFQAGGSSFGGIGD 822
           K+ NG+ SEEEL SDPAYLSYYYS+VN NPRLPPP +SKEDWRF +R + G S+ GGIGD
Sbjct: 91  KDVNGIASEEELRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASALGGIGD 150

Query: 823 KRKSSRTDE 849
           +RK +RTD+
Sbjct: 151 RRKVNRTDD 159


>emb|CBI16097.3| unnamed protein product [Vitis vinifera]
          Length = 358

 Score =  146 bits (368), Expect = 7e-33
 Identities = 71/107 (66%), Positives = 82/107 (76%)
 Frame = +1

Query: 532 QRRQEASASDRERELNICRGGSAPPTVEGSLAAIAGIKNANGLLSEEELLSDPAYLSYYY 711
           QRRQEA   D E+ELN+ R GSAPPTVEGS+ A+    N NG  SEEEL SDPAYLSYYY
Sbjct: 33  QRRQEAD--DYEKELNLYRSGSAPPTVEGSMNAVGDDGNGNGFASEEELRSDPAYLSYYY 90

Query: 712 SHVNRNPRLPPPAISKEDWRFSRRFQAGGSSFGGIGDKRKSSRTDEE 852
           S+VN NPRLPPP +SKEDWRF++R + G S  GGIGD+RK +R D E
Sbjct: 91  SNVNLNPRLPPPLLSKEDWRFAQRLKGGSSGLGGIGDRRKMNRNDSE 137


>ref|XP_003537979.1| PREDICTED: pumilio homolog 2-like [Glycine max]
          Length = 1049

 Score =  143 bits (361), Expect = 4e-32
 Identities = 74/128 (57%), Positives = 88/128 (68%), Gaps = 22/128 (17%)
 Frame = +1

Query: 532 QRRQEASASDRERELNICRGGSAPPTVEGSLAAIAGI----------------------K 645
           QRRQ+A   DRERELNI R GSAPPTVEGSL+A+ G                       K
Sbjct: 33  QRRQDAD--DRERELNIYRSGSAPPTVEGSLSAVGGFFGGAAGAPATGAPVAFLEFQGTK 90

Query: 646 NANGLLSEEELLSDPAYLSYYYSHVNRNPRLPPPAISKEDWRFSRRFQAGGSSFGGIGDK 825
           + NG+ SEEE+ SDPAYLSYYYS+VN NPRLPPP +SKEDWRF +R + G S+ GGIGD+
Sbjct: 91  DVNGITSEEEVRSDPAYLSYYYSNVNLNPRLPPPLLSKEDWRFQQRLKGGASALGGIGDR 150

Query: 826 RKSSRTDE 849
           RK +RTD+
Sbjct: 151 RKVNRTDD 158


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