BLASTX nr result

ID: Dioscorea21_contig00005043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005043
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300805.1| predicted protein [Populus trichocarpa] gi|2...   459   e-127
ref|XP_002520977.1| NADH-ubiquinone oxidoreductase 24 kD subunit...   457   e-126
ref|XP_002281655.1| PREDICTED: NADH dehydrogenase [ubiquinone] f...   456   e-126
ref|XP_002307624.1| predicted protein [Populus trichocarpa] gi|2...   452   e-125
ref|XP_003597927.1| NADH-ubiquinone oxidoreductase 24 kDa subuni...   446   e-123

>ref|XP_002300805.1| predicted protein [Populus trichocarpa] gi|222842531|gb|EEE80078.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  459 bits (1180), Expect = e-127
 Identities = 218/255 (85%), Positives = 238/255 (93%)
 Frame = +2

Query: 2   ARLAAKRVFQIRTAFHGSPKVTLASRSFSTALNYHIDSPDNNPDMPWDFSQANKERVKEI 181
           ARL A+R+ +IR A   +P+   ASRSFSTALNYH+++P+NNPD+PW+F+ ANKE+VKEI
Sbjct: 3   ARLGARRLLEIRQALRLTPQ---ASRSFSTALNYHLNTPENNPDLPWEFTAANKEKVKEI 59

Query: 182 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKIIEVAPIRVYEVATFYSMFNRT 361
           +SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAK+IEVAPIRVYEVATFYSMFNR+
Sbjct: 60  ISHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRS 119

Query: 362 KVGKYHLLVCGTTPCMIRGSREIEEALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 541
            VGKYHLLVCGTTPCMIRGSREIE+AL+KHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM
Sbjct: 120 PVGKYHLLVCGTTPCMIRGSREIEDALVKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 179

Query: 542 ITVADYSKGSEGYTYNYYEDVTPKRVIEIVEMLRRGEAPPVGTQNPLRTKSGPEGGNTTL 721
           ITVADYS GSEGYTYNYYEDVTPKRV+EIVEMLR+GE PP GTQNP RTK GPEGGNTTL
Sbjct: 180 ITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRKGEKPPHGTQNPQRTKCGPEGGNTTL 239

Query: 722 LGEPKPPPCRDLDAC 766
            GEPKPPPCRDLDAC
Sbjct: 240 HGEPKPPPCRDLDAC 254


>ref|XP_002520977.1| NADH-ubiquinone oxidoreductase 24 kD subunit, putative [Ricinus
           communis] gi|223539814|gb|EEF41394.1| NADH-ubiquinone
           oxidoreductase 24 kD subunit, putative [Ricinus
           communis]
          Length = 255

 Score =  457 bits (1175), Expect = e-126
 Identities = 221/255 (86%), Positives = 236/255 (92%)
 Frame = +2

Query: 2   ARLAAKRVFQIRTAFHGSPKVTLASRSFSTALNYHIDSPDNNPDMPWDFSQANKERVKEI 181
           ARLAA R+ +IR  F  S +    SRSFSTALNYHIDSPDNNP++PW+FS+ NKE+VKEI
Sbjct: 3   ARLAATRLREIRQVFGQSSQQI--SRSFSTALNYHIDSPDNNPNIPWEFSEKNKEKVKEI 60

Query: 182 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKIIEVAPIRVYEVATFYSMFNRT 361
           +SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+AVAK+IEVAPIRVYEVATFYSMFNR+
Sbjct: 61  ISHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDAVAKVIEVAPIRVYEVATFYSMFNRS 120

Query: 362 KVGKYHLLVCGTTPCMIRGSREIEEALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 541
            VGKYHLLVCGTTPCMIRGSREIE+ALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM
Sbjct: 121 PVGKYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 180

Query: 542 ITVADYSKGSEGYTYNYYEDVTPKRVIEIVEMLRRGEAPPVGTQNPLRTKSGPEGGNTTL 721
           ITVADYS GSEGYTYNYYEDVTPKRV+EIV+MLRRGE PP GTQNP R KSGPEGGNTTL
Sbjct: 181 ITVADYSNGSEGYTYNYYEDVTPKRVVEIVDMLRRGEKPPHGTQNPKRIKSGPEGGNTTL 240

Query: 722 LGEPKPPPCRDLDAC 766
            GEPKPPPCRDLDAC
Sbjct: 241 NGEPKPPPCRDLDAC 255


>ref|XP_002281655.1| PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 2,
           mitochondrial [Vitis vinifera]
           gi|297735489|emb|CBI17929.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  456 bits (1174), Expect = e-126
 Identities = 218/255 (85%), Positives = 235/255 (92%)
 Frame = +2

Query: 2   ARLAAKRVFQIRTAFHGSPKVTLASRSFSTALNYHIDSPDNNPDMPWDFSQANKERVKEI 181
           ARLA KR+ ++R  F  + +    SRSFSTALNYH+DSPDNNP++PW+F+ ANK +VKEI
Sbjct: 3   ARLATKRLLEVRQIFRQNHQT---SRSFSTALNYHLDSPDNNPNIPWEFNDANKGKVKEI 59

Query: 182 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKIIEVAPIRVYEVATFYSMFNRT 361
           LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+AVAK++EVAPIRVYEVATFYSMFNR 
Sbjct: 60  LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDAVAKVVEVAPIRVYEVATFYSMFNRA 119

Query: 362 KVGKYHLLVCGTTPCMIRGSREIEEALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 541
           KVGKYHLLVCGTTPCMIRGSREIE+ALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM
Sbjct: 120 KVGKYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 179

Query: 542 ITVADYSKGSEGYTYNYYEDVTPKRVIEIVEMLRRGEAPPVGTQNPLRTKSGPEGGNTTL 721
           ITVADYS GSEGYTYNYYEDVTPKRV+EIVEMLRRGE PP GTQNP RT+ GPEGGNTTL
Sbjct: 180 ITVADYSTGSEGYTYNYYEDVTPKRVVEIVEMLRRGEKPPHGTQNPQRTRCGPEGGNTTL 239

Query: 722 LGEPKPPPCRDLDAC 766
           LGEPK PPCRDLDAC
Sbjct: 240 LGEPKAPPCRDLDAC 254


>ref|XP_002307624.1| predicted protein [Populus trichocarpa] gi|222857073|gb|EEE94620.1|
           predicted protein [Populus trichocarpa]
          Length = 254

 Score =  452 bits (1162), Expect = e-125
 Identities = 216/255 (84%), Positives = 234/255 (91%)
 Frame = +2

Query: 2   ARLAAKRVFQIRTAFHGSPKVTLASRSFSTALNYHIDSPDNNPDMPWDFSQANKERVKEI 181
           AR+ A R+ +IR +   +P+   ASRS STALNYHID+ DNNPD+PW+FS +NKE+VKEI
Sbjct: 3   ARIVATRLLEIRQSLRLTPQ---ASRSLSTALNYHIDTADNNPDLPWEFSASNKEKVKEI 59

Query: 182 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKIIEVAPIRVYEVATFYSMFNRT 361
           +SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAK+IEVAPIRVYEVATFYSMFNR+
Sbjct: 60  VSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKVIEVAPIRVYEVATFYSMFNRS 119

Query: 362 KVGKYHLLVCGTTPCMIRGSREIEEALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 541
            VGKYHLLVCGTTPCMIRGSREIE+ALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM
Sbjct: 120 PVGKYHLLVCGTTPCMIRGSREIEDALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 179

Query: 542 ITVADYSKGSEGYTYNYYEDVTPKRVIEIVEMLRRGEAPPVGTQNPLRTKSGPEGGNTTL 721
           ITVADYS GSEGYTYNYYEDVTPKRV+EIVEMLR+GE PP GTQNP R K GPEGGNTTL
Sbjct: 180 ITVADYSNGSEGYTYNYYEDVTPKRVVEIVEMLRKGEKPPHGTQNPKRIKCGPEGGNTTL 239

Query: 722 LGEPKPPPCRDLDAC 766
            GEPKPPPCRDLD+C
Sbjct: 240 HGEPKPPPCRDLDSC 254


>ref|XP_003597927.1| NADH-ubiquinone oxidoreductase 24 kDa subunit [Medicago truncatula]
           gi|355486975|gb|AES68178.1| NADH-ubiquinone
           oxidoreductase 24 kDa subunit [Medicago truncatula]
          Length = 251

 Score =  446 bits (1146), Expect = e-123
 Identities = 213/255 (83%), Positives = 231/255 (90%)
 Frame = +2

Query: 2   ARLAAKRVFQIRTAFHGSPKVTLASRSFSTALNYHIDSPDNNPDMPWDFSQANKERVKEI 181
           ARLAA R+ QIR  FH        SR+FSTALNYH+DSPDNNP++PW+F+ ANK +VKEI
Sbjct: 3   ARLAANRLNQIRQTFHQP------SRAFSTALNYHLDSPDNNPNLPWEFNDANKAKVKEI 56

Query: 182 LSHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMNAVAKIIEVAPIRVYEVATFYSMFNRT 361
           +SHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAM+AVAK+IEVAPIRVYEVATFYSMFNR+
Sbjct: 57  ISHYPSNYKQSAVIPLLDLAQQQHGGWLPVSAMDAVAKVIEVAPIRVYEVATFYSMFNRS 116

Query: 362 KVGKYHLLVCGTTPCMIRGSREIEEALLKHLGVKRNEVTKDGLFSVGEMECMGCCVNAPM 541
           KVGKYHLLVCGTTPCMIRGSREIE ALLKHLGVKRNEVT+DG FSVGEMECMGCCVNAPM
Sbjct: 117 KVGKYHLLVCGTTPCMIRGSREIEAALLKHLGVKRNEVTQDGFFSVGEMECMGCCVNAPM 176

Query: 542 ITVADYSKGSEGYTYNYYEDVTPKRVIEIVEMLRRGEAPPVGTQNPLRTKSGPEGGNTTL 721
           ITVADYS GSEGYTYNYYEDVTP++V+EIVE LR+GE PP GTQNP R +S PEGGNTTL
Sbjct: 177 ITVADYSNGSEGYTYNYYEDVTPEKVVEIVEKLRKGEKPPHGTQNPHRIRSAPEGGNTTL 236

Query: 722 LGEPKPPPCRDLDAC 766
           L EPKPPPCRDLDAC
Sbjct: 237 LSEPKPPPCRDLDAC 251


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