BLASTX nr result

ID: Dioscorea21_contig00005015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00005015
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA64217.1| pectinmethylesterase [Vigna radiata var. radiata]     201   3e-64
gb|ACJ02103.1| pectin methylesterase [Oncidium Gower Ramsey]          196   5e-63
ref|XP_003622688.1| Pectinesterase [Medicago truncatula] gi|3554...   197   2e-62
ref|XP_002317208.1| predicted protein [Populus trichocarpa] gi|2...   201   3e-62
gb|AFK35109.1| unknown [Medicago truncatula]                          197   6e-62

>emb|CAA64217.1| pectinmethylesterase [Vigna radiata var. radiata]
          Length = 320

 Score =  201 bits (512), Expect(2) = 3e-64
 Identities = 96/123 (78%), Positives = 110/123 (89%)
 Frame = -1

Query: 515 KKGVYKETVRLEKKKKNVMIVGDGMDATVITGSLNFVDGTTTFNSATLAAVGDGLILQDL 336
           KKG YKE V + KKKKN+M+VGDGMDAT+ITGSLNF+DGTTTFNSAT+AAVGDG I QD+
Sbjct: 41  KKGTYKEHVEIGKKKKNIMLVGDGMDATIITGSLNFIDGTTTFNSATVAAVGDGFIGQDI 100

Query: 335 KIENTAGAIKHQAVALRVGADKSVINRCNIEGYQDTLYTHSLRQFYRDSIISGTVDFIFG 156
             +NTAGA KHQAVALRVGAD+SVINRC I+ +QDTLY HS RQFYRDS+I+GT+DFIFG
Sbjct: 101 WFQNTAGAAKHQAVALRVGADQSVINRCRIDAFQDTLYAHSNRQFYRDSVITGTIDFIFG 160

Query: 155 NAA 147
           NAA
Sbjct: 161 NAA 163



 Score = 68.9 bits (167), Expect(2) = 3e-64
 Identities = 30/40 (75%), Positives = 35/40 (87%)
 Frame = -2

Query: 127 ARRPLDNQKNLVTAQGRIDPNQNTGTSIQNCQIVPSNDLK 8
           AR+P+ NQKN+VTAQGR DPNQNTGTSIQ C + PS+DLK
Sbjct: 173 ARKPMSNQKNMVTAQGREDPNQNTGTSIQQCNLTPSSDLK 212


>gb|ACJ02103.1| pectin methylesterase [Oncidium Gower Ramsey]
          Length = 529

 Score =  196 bits (499), Expect(2) = 5e-63
 Identities = 95/123 (77%), Positives = 108/123 (87%)
 Frame = -1

Query: 515 KKGVYKETVRLEKKKKNVMIVGDGMDATVITGSLNFVDGTTTFNSATLAAVGDGLILQDL 336
           KKG YKE V + KKKKN+MIVGDG   T+ITGSLNFVDGTTT+NSATLA++GDG ILQDL
Sbjct: 252 KKGTYKENVIVGKKKKNLMIVGDGQSNTIITGSLNFVDGTTTYNSATLASMGDGFILQDL 311

Query: 335 KIENTAGAIKHQAVALRVGADKSVINRCNIEGYQDTLYTHSLRQFYRDSIISGTVDFIFG 156
            +ENTAG  KHQAVALR+ AD++V+NRC I  YQDTLYTHSLRQFYR+S+ISGTVDFIFG
Sbjct: 312 CVENTAGPQKHQAVALRINADQAVVNRCQIRAYQDTLYTHSLRQFYRESLISGTVDFIFG 371

Query: 155 NAA 147
           NAA
Sbjct: 372 NAA 374



 Score = 69.7 bits (169), Expect(2) = 5e-63
 Identities = 30/40 (75%), Positives = 36/40 (90%)
 Frame = -2

Query: 127 ARRPLDNQKNLVTAQGRIDPNQNTGTSIQNCQIVPSNDLK 8
           AR+P+  QKN VTAQGR+DPNQNTGTSIQNC++VPS DL+
Sbjct: 384 ARKPMSGQKNAVTAQGRVDPNQNTGTSIQNCKLVPSADLR 423


>ref|XP_003622688.1| Pectinesterase [Medicago truncatula] gi|355497703|gb|AES78906.1|
           Pectinesterase [Medicago truncatula]
          Length = 554

 Score =  197 bits (500), Expect(2) = 2e-62
 Identities = 94/123 (76%), Positives = 107/123 (86%)
 Frame = -1

Query: 515 KKGVYKETVRLEKKKKNVMIVGDGMDATVITGSLNFVDGTTTFNSATLAAVGDGLILQDL 336
           KKG YKE + + KKK NVM+VGDGMDAT+ITGSLNF+DGTTTF SAT+AAVGDG I QD+
Sbjct: 275 KKGTYKENIEIGKKKTNVMLVGDGMDATIITGSLNFIDGTTTFKSATVAAVGDGFIAQDI 334

Query: 335 KIENTAGAIKHQAVALRVGADKSVINRCNIEGYQDTLYTHSLRQFYRDSIISGTVDFIFG 156
           + +NTAG  KHQAVALRVGAD+SVINRC I+ +QDTLY HS RQFYRDS I+GTVDFIFG
Sbjct: 335 RFQNTAGPQKHQAVALRVGADQSVINRCKIDAFQDTLYAHSNRQFYRDSYITGTVDFIFG 394

Query: 155 NAA 147
           NAA
Sbjct: 395 NAA 397



 Score = 67.4 bits (163), Expect(2) = 2e-62
 Identities = 29/40 (72%), Positives = 35/40 (87%)
 Frame = -2

Query: 127 ARRPLDNQKNLVTAQGRIDPNQNTGTSIQNCQIVPSNDLK 8
           AR+P+ NQKN+VTAQGR DPNQNT TSIQ C ++PS+DLK
Sbjct: 407 ARKPMANQKNMVTAQGREDPNQNTATSIQQCDVIPSSDLK 446


>ref|XP_002317208.1| predicted protein [Populus trichocarpa] gi|222860273|gb|EEE97820.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score =  201 bits (510), Expect(2) = 3e-62
 Identities = 98/123 (79%), Positives = 109/123 (88%)
 Frame = -1

Query: 515 KKGVYKETVRLEKKKKNVMIVGDGMDATVITGSLNFVDGTTTFNSATLAAVGDGLILQDL 336
           KKG YKE V + KKKKNVM+VGDGMD+T+ITGSLN VDG+TTFNSAT+AAVGDG I QD+
Sbjct: 272 KKGTYKENVEVGKKKKNVMLVGDGMDSTIITGSLNVVDGSTTFNSATVAAVGDGFIAQDI 331

Query: 335 KIENTAGAIKHQAVALRVGADKSVINRCNIEGYQDTLYTHSLRQFYRDSIISGTVDFIFG 156
             +NTAG  KHQAVALRVGAD+SVINRC I+ YQDTLYTHSLRQFYRDS I+GTVDFIFG
Sbjct: 332 WFQNTAGPEKHQAVALRVGADQSVINRCRIDAYQDTLYTHSLRQFYRDSYITGTVDFIFG 391

Query: 155 NAA 147
           NAA
Sbjct: 392 NAA 394



 Score = 62.8 bits (151), Expect(2) = 3e-62
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -2

Query: 124 RRPLDNQKNLVTAQGRIDPNQNTGTSIQNCQIVPSNDL 11
           R+P+  QKN+VTAQGR DPNQNTGTSIQ C I+ S+DL
Sbjct: 405 RKPMSGQKNMVTAQGRTDPNQNTGTSIQKCDIIASSDL 442


>gb|AFK35109.1| unknown [Medicago truncatula]
          Length = 554

 Score =  197 bits (500), Expect(2) = 6e-62
 Identities = 94/123 (76%), Positives = 107/123 (86%)
 Frame = -1

Query: 515 KKGVYKETVRLEKKKKNVMIVGDGMDATVITGSLNFVDGTTTFNSATLAAVGDGLILQDL 336
           KKG YKE + + KKK NVM+VGDGMDAT+ITGSLNF+DGTTTF SAT+AAVGDG I QD+
Sbjct: 275 KKGTYKENIEIGKKKTNVMLVGDGMDATIITGSLNFIDGTTTFKSATVAAVGDGFIAQDI 334

Query: 335 KIENTAGAIKHQAVALRVGADKSVINRCNIEGYQDTLYTHSLRQFYRDSIISGTVDFIFG 156
           + +NTAG  KHQAVALRVGAD+SVINRC I+ +QDTLY HS RQFYRDS I+GTVDFIFG
Sbjct: 335 RFQNTAGPQKHQAVALRVGADQSVINRCKIDAFQDTLYAHSNRQFYRDSYITGTVDFIFG 394

Query: 155 NAA 147
           NAA
Sbjct: 395 NAA 397



 Score = 65.9 bits (159), Expect(2) = 6e-62
 Identities = 28/39 (71%), Positives = 34/39 (87%)
 Frame = -2

Query: 124 RRPLDNQKNLVTAQGRIDPNQNTGTSIQNCQIVPSNDLK 8
           R+P+ NQKN+VTAQGR DPNQNT TSIQ C ++PS+DLK
Sbjct: 408 RKPMANQKNMVTAQGREDPNQNTATSIQQCDVIPSSDLK 446


Top