BLASTX nr result

ID: Dioscorea21_contig00004985 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004985
         (1280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327176.1| f-box family protein [Populus trichocarpa] g...   478   e-141
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g...   478   e-141
ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|22355...   466   e-138
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc...   467   e-137
ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Gly...   461   e-135

>ref|XP_002327176.1| f-box family protein [Populus trichocarpa]
            gi|222835491|gb|EEE73926.1| f-box family protein [Populus
            trichocarpa]
          Length = 534

 Score =  478 bits (1230), Expect(2) = e-141
 Identities = 236/333 (70%), Positives = 276/333 (82%), Gaps = 2/333 (0%)
 Frame = +3

Query: 96   ADLPDEILVLIFNSLSSADRKHCSLVCLRWLTVEGQSRHRLSLDARAGLLVAAPALFSRF 275
            +DLPDE L  IF SL+S DRKHCSLVC RWL +EGQSRHRLSL+A++ LL   P LFSRF
Sbjct: 53   SDLPDECLACIFQSLNSGDRKHCSLVCRRWLRIEGQSRHRLSLNAQSDLLPLVPFLFSRF 112

Query: 276  DSVSKLALKCDRRSDSIGDEALVLISLRCPNLTRLKLRACRALTADGMAALAKHCPSLRR 455
            DSV+KLALKCDRRS SIGDEALV IS RC NLTRLKLR+CR LT  GMAA AK+C +L++
Sbjct: 113  DSVTKLALKCDRRSTSIGDEALVAISSRCRNLTRLKLRSCRELTDAGMAAFAKNCKALKK 172

Query: 456  FSCGSCAFGSKGIEAILGGCPLLEELSVKRLRGLGD--AVEVSCPGVAAGSLRSVCLKEL 629
             SCGSC FG++G+ AIL  C  LEELS+KRLRG+ D  A E   PG+AA SL+++CLKEL
Sbjct: 173  LSCGSCTFGARGMNAILDNCASLEELSLKRLRGITDGAAAEPVGPGLAAASLKTICLKEL 232

Query: 630  YNGQCFGPLIAGCRNLKTLKLFRCSGDWDPLLEQIASHVPGIVEIHLEKLQVSDRSLFAL 809
            YNGQCFGPLI G +NLKTLKLFRCSGDWD LL+ I+  V G+VEIHLE+LQVSD  L A+
Sbjct: 233  YNGQCFGPLIIGSKNLKTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDTGLAAI 292

Query: 810  SSCADLEVLHLVKTPECTDAGLALLAEKCVLLRKIHIDGWKTNRIGDAGLIAVAQRCLNL 989
            S+C +LE+LHLVKTPECTD GL  +AE+C LLRK+H+DGWKTNRIGD GL AVA+ C NL
Sbjct: 293  SNCLNLEILHLVKTPECTDTGLVSIAERCRLLRKLHVDGWKTNRIGDDGLSAVAKYCPNL 352

Query: 990  QELVLIGVNPTALSLGMIASNCRNLERLALCGS 1088
            QELVLIGVNPT +S+ ++ASNC+NLERLALCGS
Sbjct: 353  QELVLIGVNPTKISVELLASNCQNLERLALCGS 385



 Score = 53.5 bits (127), Expect(2) = e-141
 Identities = 26/46 (56%), Positives = 27/46 (58%)
 Frame = +1

Query: 1141 LALCGSETFGDPEISXXXXXXXXXXXXXXXGCPVSDHGMEALAGGC 1278
            LALCGS+T GD EIS                CPVSDHGMEALA GC
Sbjct: 380  LALCGSDTVGDAEISCIAAKCVALKKLCIKSCPVSDHGMEALANGC 425


>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
            gi|222842891|gb|EEE80438.1| f-box family protein [Populus
            trichocarpa]
          Length = 533

 Score =  478 bits (1231), Expect(2) = e-141
 Identities = 237/333 (71%), Positives = 278/333 (83%), Gaps = 2/333 (0%)
 Frame = +3

Query: 96   ADLPDEILVLIFNSLSSADRKHCSLVCLRWLTVEGQSRHRLSLDARAGLLVAAPALFSRF 275
            +DLPDE L  IF SLSS DRK CSLVC RWL +EGQSRHRLSL+A++ LL    +LFSRF
Sbjct: 52   SDLPDECLACIFQSLSSGDRKSCSLVCRRWLRIEGQSRHRLSLNAQSDLLPFVTSLFSRF 111

Query: 276  DSVSKLALKCDRRSDSIGDEALVLISLRCPNLTRLKLRACRALTADGMAALAKHCPSLRR 455
            D+V+KLALKCDRRS SIGDEALV IS+RC NLTRLKLRACR +T  GMAA AK+C +L++
Sbjct: 112  DAVTKLALKCDRRSVSIGDEALVAISIRCRNLTRLKLRACREITDAGMAAFAKNCKALKK 171

Query: 456  FSCGSCAFGSKGIEAILGGCPLLEELSVKRLRGLGDAV--EVSCPGVAAGSLRSVCLKEL 629
            FSCGSCAFG+KG+ A+L  C  LE+LSVKRLRG+ D    E   PG+AA SL+++CLKEL
Sbjct: 172  FSCGSCAFGAKGMNAMLDNCASLEDLSVKRLRGITDGATAEPIGPGLAAASLKTICLKEL 231

Query: 630  YNGQCFGPLIAGCRNLKTLKLFRCSGDWDPLLEQIASHVPGIVEIHLEKLQVSDRSLFAL 809
            YNGQCFGPLI G +NLKTLKLFRCSGDWD LL+ IA  V G+VEIHLE+LQVSD  L A+
Sbjct: 232  YNGQCFGPLIIGSKNLKTLKLFRCSGDWDKLLQVIADRVTGMVEIHLERLQVSDTGLVAI 291

Query: 810  SSCADLEVLHLVKTPECTDAGLALLAEKCVLLRKIHIDGWKTNRIGDAGLIAVAQRCLNL 989
            S+C +LE+LHLVKTPECTD GL  +AE+C LLRK+HIDGWK +RIGD GL+AVA+ CLNL
Sbjct: 292  SNCLNLEILHLVKTPECTDIGLVSIAERCRLLRKLHIDGWKAHRIGDDGLMAVAKYCLNL 351

Query: 990  QELVLIGVNPTALSLGMIASNCRNLERLALCGS 1088
            QELVLIGVNPT +SL ++ASNC+NLERLALCGS
Sbjct: 352  QELVLIGVNPTQISLELLASNCQNLERLALCGS 384



 Score = 52.0 bits (123), Expect(2) = e-141
 Identities = 25/46 (54%), Positives = 27/46 (58%)
 Frame = +1

Query: 1141 LALCGSETFGDPEISXXXXXXXXXXXXXXXGCPVSDHGMEALAGGC 1278
            LALCGS+T GD EIS                CPVSDHG+EALA GC
Sbjct: 379  LALCGSDTVGDVEISCIAAKCVALKKLCIKSCPVSDHGLEALANGC 424


>ref|XP_002510165.1| skip-2, putative [Ricinus communis] gi|223550866|gb|EEF52352.1|
            skip-2, putative [Ricinus communis]
          Length = 536

 Score =  466 bits (1200), Expect(2) = e-138
 Identities = 231/333 (69%), Positives = 272/333 (81%), Gaps = 2/333 (0%)
 Frame = +3

Query: 96   ADLPDEILVLIFNSLSSADRKHCSLVCLRWLTVEGQSRHRLSLDARAGLLVAAPALFSRF 275
            +DLPDE L  IF SLS +DR+ CSLVC RWL +EGQSRHRLSL A++ LL    ALF+RF
Sbjct: 54   SDLPDECLACIFQSLSPSDRQRCSLVCRRWLRIEGQSRHRLSLHAQSDLLPVISALFTRF 113

Query: 276  DSVSKLALKCDRRSDSIGDEALVLISLRCPNLTRLKLRACRALTADGMAALAKHCPSLRR 455
            D+V+KLAL+CDR+S SIGDEAL  ISLRC NLTRLKLR+CR +T  GMAA AK+C  L++
Sbjct: 114  DAVTKLALRCDRKSASIGDEALEAISLRCRNLTRLKLRSCRDVTDAGMAAFAKNCKGLKK 173

Query: 456  FSCGSCAFGSKGIEAILGGCPLLEELSVKRLRGLGD--AVEVSCPGVAAGSLRSVCLKEL 629
             SCGSC FG+KG+ A+L  C  LEELS+KRLRG+ D  A E   PG+AA SL+++CLKEL
Sbjct: 174  LSCGSCTFGAKGMNAVLDNCASLEELSIKRLRGITDGAAAEPIGPGLAANSLKTICLKEL 233

Query: 630  YNGQCFGPLIAGCRNLKTLKLFRCSGDWDPLLEQIASHVPGIVEIHLEKLQVSDRSLFAL 809
            YNGQCFGPLI G +NL+TLKLFRCSGDWD LL+ I+  V G+VEIHLE+LQVSD  L A+
Sbjct: 234  YNGQCFGPLIIGSKNLRTLKLFRCSGDWDKLLQVISDRVTGMVEIHLERLQVSDVGLSAI 293

Query: 810  SSCADLEVLHLVKTPECTDAGLALLAEKCVLLRKIHIDGWKTNRIGDAGLIAVAQRCLNL 989
            S+C DLE+LHLVKTPECT+ GL  +AE+C LLRK+HIDGWK NRIGD GLIAVA+ C NL
Sbjct: 294  SNCLDLEILHLVKTPECTNLGLGSIAERCKLLRKLHIDGWKANRIGDDGLIAVAKNCPNL 353

Query: 990  QELVLIGVNPTALSLGMIASNCRNLERLALCGS 1088
            QELVLIGVNPT  SL M+ASNC+NLERLALCGS
Sbjct: 354  QELVLIGVNPTKSSLEMLASNCQNLERLALCGS 386



 Score = 53.5 bits (127), Expect(2) = e-138
 Identities = 26/46 (56%), Positives = 27/46 (58%)
 Frame = +1

Query: 1141 LALCGSETFGDPEISXXXXXXXXXXXXXXXGCPVSDHGMEALAGGC 1278
            LALCGS+T GD EIS                CPVSDHGMEALA GC
Sbjct: 381  LALCGSDTVGDAEISCIAAKCISLKKLCIKSCPVSDHGMEALASGC 426


>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
            gi|449515093|ref|XP_004164584.1| PREDICTED: F-box protein
            At1g47056-like [Cucumis sativus]
          Length = 535

 Score =  467 bits (1201), Expect(2) = e-137
 Identities = 229/332 (68%), Positives = 269/332 (81%), Gaps = 1/332 (0%)
 Frame = +3

Query: 96   ADLPDEILVLIFNSLSSADRKHCSLVCLRWLTVEGQSRHRLSLDARAGLLVAAPALFSRF 275
            +DLPDE L  IF SLSS DRK CSLVC RW  VEGQSRHRLSL A A L    P+LF+RF
Sbjct: 53   SDLPDECLACIFQSLSSVDRKGCSLVCRRWFKVEGQSRHRLSLKAEADLSSMIPSLFTRF 112

Query: 276  DSVSKLALKCDRRSDSIGDEALVLISLRCPNLTRLKLRACRALTADGMAALAKHCPSLRR 455
            D+V+KLALKCDRRS SI D++L+LISLRC NLTRLKLRACR LT  GMAA AK+C  L++
Sbjct: 113  DAVTKLALKCDRRSTSIRDDSLILISLRCRNLTRLKLRACRELTDVGMAAFAKNCKGLKK 172

Query: 456  FSCGSCAFGSKGIEAILGGCPLLEELSVKRLRGLGDAV-EVSCPGVAAGSLRSVCLKELY 632
             SCGSC FG+KG+ A+L  C  LEELSVKRLRG+ D+  E   PG+A  SL+++CLK+LY
Sbjct: 173  LSCGSCTFGAKGMNAVLDNCSALEELSVKRLRGITDSTAEPIGPGIAGSSLKTICLKDLY 232

Query: 633  NGQCFGPLIAGCRNLKTLKLFRCSGDWDPLLEQIASHVPGIVEIHLEKLQVSDRSLFALS 812
            N QCFGPL+ G ++L+TLKLFRCSGDWD LL  IA  V G+VE+HLE+LQVSD  L A+S
Sbjct: 233  NAQCFGPLLIGAKSLRTLKLFRCSGDWDALLRVIADRVTGLVEVHLERLQVSDVGLSAIS 292

Query: 813  SCADLEVLHLVKTPECTDAGLALLAEKCVLLRKIHIDGWKTNRIGDAGLIAVAQRCLNLQ 992
            +C DLE+LHLVKTPECT+ G+  LAE+C LLRK+HIDGWK NRIGD GL+AVA+ C NLQ
Sbjct: 293  NCLDLEILHLVKTPECTNLGIVALAERCKLLRKLHIDGWKANRIGDEGLVAVARNCSNLQ 352

Query: 993  ELVLIGVNPTALSLGMIASNCRNLERLALCGS 1088
            ELVLIGVNPT +SL ++ASNCRNLERLALCGS
Sbjct: 353  ELVLIGVNPTKVSLEILASNCRNLERLALCGS 384



 Score = 49.7 bits (117), Expect(2) = e-137
 Identities = 25/46 (54%), Positives = 26/46 (56%)
 Frame = +1

Query: 1141 LALCGSETFGDPEISXXXXXXXXXXXXXXXGCPVSDHGMEALAGGC 1278
            LALCGS+T GD EIS                CPVSD GMEALA GC
Sbjct: 379  LALCGSDTVGDSEISCIAAKCIALKKLCIKSCPVSDQGMEALAEGC 424


>ref|XP_003544473.1| PREDICTED: F-box protein At1g47056-like [Glycine max]
          Length = 549

 Score =  461 bits (1185), Expect(2) = e-135
 Identities = 232/333 (69%), Positives = 266/333 (79%), Gaps = 2/333 (0%)
 Frame = +3

Query: 96   ADLPDEILVLIFNSLSSADRKHCSLVCLRWLTVEGQSRHRLSLDARAGLLVAAPALFSRF 275
            +DLP+E L  +F  LSSADR  CSLVC RWL +EGQSRHRLSL+A   L  A P+LFSRF
Sbjct: 66   SDLPNECLASVFQFLSSADRNRCSLVCRRWLQIEGQSRHRLSLNADEDLFPAIPSLFSRF 125

Query: 276  DSVSKLALKCDRRSDSIGDEALVLISLRCPNLTRLKLRACRALTADGMAALAKHCPSLRR 455
            DSV+KLALKCDRRS SI D+ALVLIS RCPNLTRLKLRACRALT  GM A AK+C  L++
Sbjct: 126  DSVTKLALKCDRRSVSISDDALVLISQRCPNLTRLKLRACRALTDAGMEAFAKNCKGLKK 185

Query: 456  FSCGSCAFGSKGIEAILGGCPLLEELSVKRLRGLGDAV--EVSCPGVAAGSLRSVCLKEL 629
             SCGSC FGSKG+ A+L  C  LEELSVKRLRG+ DA   E   PGVAA SL+ VCLKEL
Sbjct: 186  LSCGSCTFGSKGMNAVLDNCAALEELSVKRLRGITDAAAAEPIGPGVAAASLKIVCLKEL 245

Query: 630  YNGQCFGPLIAGCRNLKTLKLFRCSGDWDPLLEQIASHVPGIVEIHLEKLQVSDRSLFAL 809
            YNGQCFG LI G +NLKTLKLFRCSGDWD L + +A  V  +VE+HLE+LQ+SD  L A+
Sbjct: 246  YNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRVTNMVEVHLERLQISDVGLQAI 305

Query: 810  SSCADLEVLHLVKTPECTDAGLALLAEKCVLLRKIHIDGWKTNRIGDAGLIAVAQRCLNL 989
            ++ + LE+LHLVKTPEC+D GL  +A++C LLRK+HIDGWK NRIGD GLIAVA+ C NL
Sbjct: 306  ANFSSLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDEGLIAVAKGCPNL 365

Query: 990  QELVLIGVNPTALSLGMIASNCRNLERLALCGS 1088
             ELVLIGVNPT  SL M+ASNCRNLERLALCGS
Sbjct: 366  LELVLIGVNPTKASLEMLASNCRNLERLALCGS 398



 Score = 48.9 bits (115), Expect(2) = e-135
 Identities = 24/46 (52%), Positives = 26/46 (56%)
 Frame = +1

Query: 1141 LALCGSETFGDPEISXXXXXXXXXXXXXXXGCPVSDHGMEALAGGC 1278
            LALCGS++ GD EIS                CPVSD GMEALA GC
Sbjct: 393  LALCGSDSVGDTEISCIAAKCVALKKLCIKSCPVSDQGMEALANGC 438


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