BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004973
         (961 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|2...   337   2e-90
emb|CBI17752.3| unnamed protein product [Vitis vinifera]              328   2e-87
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ...   325   1e-86
ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containi...   318   1e-84
ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containi...   318   2e-84

>ref|XP_002304774.1| predicted protein [Populus trichocarpa] gi|222842206|gb|EEE79753.1|
           predicted protein [Populus trichocarpa]
          Length = 728

 Score =  337 bits (865), Expect = 2e-90
 Identities = 169/325 (52%), Positives = 225/325 (69%), Gaps = 6/325 (1%)
 Frame = +3

Query: 3   RPSQNRPIVHGGLFTNRKALXXXXXXXXXXXXXTVDFRHWDXXXXXXXXXXXXXXXXXXX 182
           +PSQNRP+V GGLFTNR+ +               D   WD                   
Sbjct: 24  KPSQNRPVVRGGLFTNRQTVKPQPPKNPITPFKPFDLHKWDPQQNLPHQPQPSKPQSPRS 83

Query: 183 XXXXXXXX-----ARFISDLLRRHRH-WSPALLSELSKLRRVSPDLVAEVLRFDPNPNPS 344
                        ARFI D  R++R+ W P +++EL KLRRV+PDLVAEVL+ + NP   
Sbjct: 84  RHSLALSQRLSPIARFILDAFRKNRNQWGPEVVTELCKLRRVTPDLVAEVLKVENNPQ-- 141

Query: 345 LSTRFFHWASRQKGFHHSYSSFNAFAHSLYRSGHPRAADRVPDLMLALGKPPSETQLELL 524
           L+T+FFHWA +QKGF H+++S+NAFA++L RS   RAAD++P+LM A GKPP+E Q E+L
Sbjct: 142 LATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNFFRAADQLPELMEAQGKPPTEKQFEIL 201

Query: 525 VRLHSQSRRGLRLFHVYKRMTSIFNIKPRVFLYNRILDSLIRTDHLDLALSVYDDMIRND 704
           +R+HS + RGLR+++VY++M   F +KPRVFLYNRI+DSLI+T HLDLALSVY+D  R+ 
Sbjct: 202 IRMHSDANRGLRVYYVYQKMVK-FGVKPRVFLYNRIMDSLIKTGHLDLALSVYEDFRRDG 260

Query: 705 VKEEPITFTILAKGLCKAGRIDAALDLLEKMRRDVCKPDVFAYTAMVKVLAAEGNVDGCL 884
           + EE +T+ IL KGLCKAGRI+  +++L +MR ++CKPDVFAYTAMV+ LA EGN+D CL
Sbjct: 261 LVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENLCKPDVFAYTAMVRALAGEGNLDACL 320

Query: 885 EVWNQMKMDGVQPDVMAYATLISGL 959
            VW +MK DGV+PDVMAY TL++ L
Sbjct: 321 RVWEEMKRDGVEPDVMAYVTLVTAL 345



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 49/215 (22%), Positives = 93/215 (43%)
 Frame = +3

Query: 312 VLRFDPNPNPSLSTRFFHWASRQKGFHHSYSSFNAFAHSLYRSGHPRAADRVPDLMLALG 491
           ++R   + N  L   + +    + G       +N    SL ++GH   A  V +     G
Sbjct: 201 LIRMHSDANRGLRVYYVYQKMVKFGVKPRVFLYNRIMDSLIKTGHLDLALSVYEDFRRDG 260

Query: 492 KPPSETQLELLVRLHSQSRRGLRLFHVYKRMTSIFNIKPRVFLYNRILDSLIRTDHLDLA 671
                    +L++   ++ R   +  V  RM      KP VF Y  ++ +L    +LD  
Sbjct: 261 LVEESVTYMILIKGLCKAGRIEEMMEVLGRMRENL-CKPDVFAYTAMVRALAGEGNLDAC 319

Query: 672 LSVYDDMIRNDVKEEPITFTILAKGLCKAGRIDAALDLLEKMRRDVCKPDVFAYTAMVKV 851
           L V+++M R+ V+ + + +  L   LCK GR+D   ++ ++M+      D   Y  +V+ 
Sbjct: 320 LRVWEEMKRDGVEPDVMAYVTLVTALCKGGRVDKGYEVFKEMKGRRILIDRGIYGILVEA 379

Query: 852 LAAEGNVDGCLEVWNQMKMDGVQPDVMAYATLISG 956
             A+G +    ++   +   G + D+  Y +LI G
Sbjct: 380 FVADGKIGLACDLLKDLVDSGYRADLRIYNSLIEG 414


>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  328 bits (840), Expect = 2e-87
 Identities = 164/321 (51%), Positives = 221/321 (68%), Gaps = 2/321 (0%)
 Frame = +3

Query: 3   RPSQNRPIVHGGLFTNRKALXXXXXXXXXXXXXTVDFRHWDXXXXXXXXXXXXXXXXXXX 182
           +PSQNRP VHGGLF+NR  L               + ++WD                   
Sbjct: 21  KPSQNRPTVHGGLFSNRTTLNPKPPTLQNPTTH-FNLQNWDPDSPKALAIPPSKTPCERF 79

Query: 183 XXXXXXXX--ARFISDLLRRHRHWSPALLSELSKLRRVSPDLVAEVLRFDPNPNPSLSTR 356
                     AR+I D  R+HR+W P ++++L+KLRRV+P LVAEVL+   +P   + ++
Sbjct: 80  FDIAKNLSPIARYICDSFRKHRNWGPPVVADLNKLRRVTPVLVAEVLKVQTDP--VICSK 137

Query: 357 FFHWASRQKGFHHSYSSFNAFAHSLYRSGHPRAADRVPDLMLALGKPPSETQLELLVRLH 536
           FFHWA +QKG+ H+++S+NAFA+ L RS   RAAD+VP+LM   GKPPSE Q E+L+R+H
Sbjct: 138 FFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIRMH 197

Query: 537 SQSRRGLRLFHVYKRMTSIFNIKPRVFLYNRILDSLIRTDHLDLALSVYDDMIRNDVKEE 716
             + RGLR+++VY++M   F IKPRVFLYNRI+D L++T HLDLA+SVY+D   + + EE
Sbjct: 198 IDANRGLRVYYVYEKMKK-FGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEE 256

Query: 717 PITFTILAKGLCKAGRIDAALDLLEKMRRDVCKPDVFAYTAMVKVLAAEGNVDGCLEVWN 896
            +T+ IL KGLCKAGRID  L+LL++MR ++CKPDVFAYTAMVKVL AEGN+DGCL VW 
Sbjct: 257 SVTYMILVKGLCKAGRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWE 316

Query: 897 QMKMDGVQPDVMAYATLISGL 959
           +M+ D V+PDVMAY TL++ L
Sbjct: 317 EMRKDKVEPDVMAYTTLVAAL 337



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
 Frame = +3

Query: 597 NIKPRVFLYNRILDSLIRTDHLDLALSVYDDMIRNDVKEEPITFTILAKGLCKAGRIDAA 776
           N KP    Y+  +   +    +  A + Y+ +I          +  L KGLCK+  IDAA
Sbjct: 531 NFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAA 590

Query: 777 LDLLEKMRRDVCK-PDVFAYTAMVKVLAAEGNVDGCLEVWNQMKMDGVQPDVMAYATLIS 953
           + L+     +V   P  F YT  +      GN +  ++V N+M  +G  PD + Y+ LIS
Sbjct: 591 IMLVRDCLANVTSGPMEFKYTLTILHACKSGNAEKVIDVLNEMMQEGCTPDEVTYSALIS 650

Query: 954 GL 959
           G+
Sbjct: 651 GM 652


>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355487951|gb|AES69154.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 767

 Score =  325 bits (832), Expect = 1e-86
 Identities = 162/324 (50%), Positives = 218/324 (67%), Gaps = 5/324 (1%)
 Frame = +3

Query: 3   RPSQNRPIVHGGLFTNRKALXXXXXXXXXXXXXTVDFRHWDXXXXXXXXXXXXXXXXXXX 182
           +PSQNRP V GGLF+NRK L             +   + WD                   
Sbjct: 20  KPSQNRPTVRGGLFSNRKTLTPPKPKSTKPTN-SFQIQKWDPHFLSQPNSPSPSPSPSPE 78

Query: 183 XXXXXXXX----ARFISDLLRRHRH-WSPALLSELSKLRRVSPDLVAEVLRFDPNPNPSL 347
                       ARFI D  R++ + W P +++EL+KLRRV+P LVAEVL+   NP  +L
Sbjct: 79  ATFSASLRLSPIARFILDAFRKNNNNWGPPVVTELNKLRRVTPTLVAEVLKVQTNP--TL 136

Query: 348 STRFFHWASRQKGFHHSYSSFNAFAHSLYRSGHPRAADRVPDLMLALGKPPSETQLELLV 527
           + +FFHW  +QKG+HH+++S+NAF + L R+ H RAAD++P+LM A GKPPSE Q E+L+
Sbjct: 137 AFKFFHWVEKQKGYHHNFASYNAFTYCLNRANHFRAADQLPELMDAQGKPPSEKQFEILI 196

Query: 528 RLHSQSRRGLRLFHVYKRMTSIFNIKPRVFLYNRILDSLIRTDHLDLALSVYDDMIRNDV 707
           R+HS + RGLR++HVY +M + F +KPRVFLYNRI+D+L++T HLDLALSVY+D   + +
Sbjct: 197 RMHSDAGRGLRVYHVYDKMRNKFGVKPRVFLYNRIMDALVKTGHLDLALSVYNDFREDGL 256

Query: 708 KEEPITFTILAKGLCKAGRIDAALDLLEKMRRDVCKPDVFAYTAMVKVLAAEGNVDGCLE 887
            EE +TF IL KGLCK G+ID  L++L +MR  +CKPDVFAYTA+V+++  EGN+DGCL 
Sbjct: 257 VEESVTFMILIKGLCKGGKIDEMLEVLGRMREKLCKPDVFAYTALVRIMVKEGNLDGCLR 316

Query: 888 VWNQMKMDGVQPDVMAYATLISGL 959
           VW +MK D V PDVMAY T+I GL
Sbjct: 317 VWKEMKRDRVDPDVMAYGTIIGGL 340


>ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Glycine max]
          Length = 733

 Score =  318 bits (815), Expect = 1e-84
 Identities = 160/319 (50%), Positives = 216/319 (67%), Gaps = 1/319 (0%)
 Frame = +3

Query: 6   PSQNRPIVHGGLFTNRKALXXXXXXXXXXXXXTVDFRHWDXXXXXXXXXXXXXXXXXXXX 185
           PSQNRP V GGLF+NR+ L               + ++WD                    
Sbjct: 36  PSQNRPTVRGGLFSNRQTL-NPNPSQPKPTTKPFNIKNWD-PHFLSNPNSNPSPSTLSSA 93

Query: 186 XXXXXXXARFISDLLRRH-RHWSPALLSELSKLRRVSPDLVAEVLRFDPNPNPSLSTRFF 362
                  ARFI D  RR+   W P + +ELSKLRR++P+LVAEVL+     N +L+++FF
Sbjct: 94  SLRLSPIARFIVDAFRRNDNKWCPNVAAELSKLRRITPNLVAEVLKV--QTNHTLASKFF 151

Query: 363 HWASRQKGFHHSYSSFNAFAHSLYRSGHPRAADRVPDLMLALGKPPSETQLELLVRLHSQ 542
           HWA  Q+G+HH+++S+NA A+ L R    RAAD++P+LM + GKPPSE Q E+L+R+HS 
Sbjct: 152 HWAGSQRGYHHNFASYNALAYCLNRHHQFRAADQLPELMESQGKPPSEKQFEILIRMHSD 211

Query: 543 SRRGLRLFHVYKRMTSIFNIKPRVFLYNRILDSLIRTDHLDLALSVYDDMIRNDVKEEPI 722
           + RGLR++HVY++M + F +KPRVFLYNR++D+L+RT HLDLALSVYDD+  + + EE +
Sbjct: 212 ANRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESV 271

Query: 723 TFTILAKGLCKAGRIDAALDLLEKMRRDVCKPDVFAYTAMVKVLAAEGNVDGCLEVWNQM 902
           TF +L KGLCK GRID  L++L +MR  +CKPDVFAYTA+VK+L   GN+D CL VW +M
Sbjct: 272 TFMVLVKGLCKCGRIDEMLEVLGRMRERLCKPDVFAYTALVKILVPAGNLDACLRVWEEM 331

Query: 903 KMDGVQPDVMAYATLISGL 959
           K D V+PDV AYAT+I GL
Sbjct: 332 KRDRVEPDVKAYATMIVGL 350



 Score = 73.2 bits (178), Expect = 9e-11
 Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 3/248 (1%)
 Frame = +3

Query: 225 LLRRHRHWSPALLSELSKLRRVSP-DLVAEVL-RFDPNPNPSLSTRFFHWASRQK-GFHH 395
           L R H+  +   L EL + +   P +   E+L R   + N  L     +   R K G   
Sbjct: 174 LNRHHQFRAADQLPELMESQGKPPSEKQFEILIRMHSDANRGLRVYHVYEKMRNKFGVKP 233

Query: 396 SYSSFNAFAHSLYRSGHPRAADRVPDLMLALGKPPSETQLELLVRLHSQSRRGLRLFHVY 575
               +N    +L R+GH   A  V D +   G         +LV+   +  R   +  V 
Sbjct: 234 RVFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRIDEMLEVL 293

Query: 576 KRMTSIFNIKPRVFLYNRILDSLIRTDHLDLALSVYDDMIRNDVKEEPITFTILAKGLCK 755
            RM      KP VF Y  ++  L+   +LD  L V+++M R+ V+ +   +  +  GL K
Sbjct: 294 GRMRERL-CKPDVFAYTALVKILVPAGNLDACLRVWEEMKRDRVEPDVKAYATMIVGLAK 352

Query: 756 AGRIDAALDLLEKMRRDVCKPDVFAYTAMVKVLAAEGNVDGCLEVWNQMKMDGVQPDVMA 935
            GR+    +L  +M+   C  D   Y A+V+   AEG V+   ++   +   G + D+  
Sbjct: 353 GGRVQEGYELFREMKGKGCLVDRVIYGALVEAFVAEGKVELAFDLLKDLVSSGYRADLGI 412

Query: 936 YATLISGL 959
           Y  LI GL
Sbjct: 413 YICLIEGL 420


>ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20740-like [Cucumis sativus]
           gi|449531474|ref|XP_004172711.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20740-like [Cucumis sativus]
          Length = 726

 Score =  318 bits (814), Expect = 2e-84
 Identities = 164/324 (50%), Positives = 222/324 (68%), Gaps = 6/324 (1%)
 Frame = +3

Query: 6   PSQNRPIVHGGLFTNRKALXXXXXXXXXXXXXTVDFRH-WDXXXXXXXXXXXXXXXXXXX 182
           P Q+RP V+GG FTNR++L                  H WD                   
Sbjct: 20  PHQHRPTVYGGFFTNRRSLPPPSPHQPTSPKPQPFLLHNWDPDLPSQKRSNLPSSTSDAF 79

Query: 183 XXXXXXXX--ARFISDLLRRHRH-WSPALLSELSKLRRVSPDLVAEVLRFDP--NPNPSL 347
                     ARFI D+ R++++ W P ++SEL+KLRRV+PDLVAEVL+     + N  L
Sbjct: 80  FSTSLRLSPIARFIVDVFRKNQNQWGPPVISELNKLRRVTPDLVAEVLKASHRRDSNSIL 139

Query: 348 STRFFHWASRQKGFHHSYSSFNAFAHSLYRSGHPRAADRVPDLMLALGKPPSETQLELLV 527
           +++FF+WA +QKGFHH+++S+NAFA+ L R    RAAD++P+LM + GKPPSE Q E+L+
Sbjct: 140 ASKFFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEILI 199

Query: 528 RLHSQSRRGLRLFHVYKRMTSIFNIKPRVFLYNRILDSLIRTDHLDLALSVYDDMIRNDV 707
           R+H  + RGLR+++VY++M   F + PRVFLYNRILD+L++TDHLDLAL+VY D   N +
Sbjct: 200 RMHCDANRGLRVYYVYEKMKK-FGVVPRVFLYNRILDALVKTDHLDLALTVYRDFQENGL 258

Query: 708 KEEPITFTILAKGLCKAGRIDAALDLLEKMRRDVCKPDVFAYTAMVKVLAAEGNVDGCLE 887
            EE +TF IL KGLCKAGR+D  L+LL +MR ++CKPDVFAYTAMVKVLA++ N++GCL 
Sbjct: 259 VEESVTFMILIKGLCKAGRVDEMLELLARMRANLCKPDVFAYTAMVKVLASKDNLEGCLR 318

Query: 888 VWNQMKMDGVQPDVMAYATLISGL 959
           VW++M+ D V+PDVMAY TLI GL
Sbjct: 319 VWDEMRADRVEPDVMAYGTLIIGL 342