BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004966
         (208 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530328.1| signal recognition particle protein, putativ...    99   5e-19
ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kD...    97   1e-18
gb|AAC64139.1| signal recognition particle 54 kDa subunit precur...    91   7e-17
ref|XP_002873124.1| hypothetical protein ARALYDRAFT_487173 [Arab...    91   7e-17
ref|NP_196014.1| signal recognition particle subunit [Arabidopsi...    91   7e-17

>ref|XP_002530328.1| signal recognition particle protein, putative [Ricinus communis]
           gi|223530132|gb|EEF32044.1| signal recognition particle
           protein, putative [Ricinus communis]
          Length = 572

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/57 (80%), Positives = 53/57 (92%)
 Frame = -3

Query: 206 MGIMEGGTIPALSNLEESLKAEQKAPPGTARRKRRSGTRKQFVDSGVARPSPRGFGS 36
           MG+MEGG+IPALSNLE++LKAEQKAPPGTARRKRRS +R+QF DS  +RPSPRGFGS
Sbjct: 514 MGVMEGGSIPALSNLEDALKAEQKAPPGTARRKRRSESRRQFADSASSRPSPRGFGS 570


>ref|XP_002276439.2| PREDICTED: signal recognition particle 54 kDa protein,
           chloroplastic-like [Vitis vinifera]
           gi|297740127|emb|CBI30309.3| unnamed protein product
           [Vitis vinifera]
          Length = 567

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/59 (76%), Positives = 54/59 (91%)
 Frame = -3

Query: 206 MGIMEGGTIPALSNLEESLKAEQKAPPGTARRKRRSGTRKQFVDSGVARPSPRGFGSKS 30
           MG+MEGG+IPALSNLEE+LK+EQKAPPGTARRKRRS +RKQF +   +RPSPRGFGS++
Sbjct: 509 MGVMEGGSIPALSNLEETLKSEQKAPPGTARRKRRSESRKQFAEPASSRPSPRGFGSRN 567


>gb|AAC64139.1| signal recognition particle 54 kDa subunit precursor [Arabidopsis
           thaliana]
          Length = 564

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/57 (71%), Positives = 52/57 (91%)
 Frame = -3

Query: 206 MGIMEGGTIPALSNLEESLKAEQKAPPGTARRKRRSGTRKQFVDSGVARPSPRGFGS 36
           MG+MEGG+IPALS LE++LKAEQKAPPGTARRKR++ +RK+FV+S  ++P PRGFGS
Sbjct: 506 MGVMEGGSIPALSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGS 562


>ref|XP_002873124.1| hypothetical protein ARALYDRAFT_487173 [Arabidopsis lyrata subsp.
           lyrata] gi|297318961|gb|EFH49383.1| hypothetical protein
           ARALYDRAFT_487173 [Arabidopsis lyrata subsp. lyrata]
          Length = 562

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/57 (71%), Positives = 52/57 (91%)
 Frame = -3

Query: 206 MGIMEGGTIPALSNLEESLKAEQKAPPGTARRKRRSGTRKQFVDSGVARPSPRGFGS 36
           MG+MEGG+IPALS LE++LKAEQKAPPGTARRKR++ +RK+FV+S  ++P PRGFGS
Sbjct: 504 MGVMEGGSIPALSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGS 560


>ref|NP_196014.1| signal recognition particle subunit [Arabidopsis thaliana]
           gi|586038|sp|P37107.1|SR54C_ARATH RecName: Full=Signal
           recognition particle 54 kDa protein, chloroplastic;
           Short=54 chloroplast protein; Short=54CP; Short=SRP54;
           Short=cpSRP54; AltName: Full=FFC; Flags: Precursor
           gi|396701|emb|CAA79981.1| 54CP [Arabidopsis thaliana]
           gi|7406404|emb|CAB85514.1| signal recognition particle
           54CP protein precursor [Arabidopsis thaliana]
           gi|15293131|gb|AAK93676.1| putative signal recognition
           particle 54CP protein precursor [Arabidopsis thaliana]
           gi|24030445|gb|AAN41376.1| putative signal recognition
           particle 54CP protein precursor [Arabidopsis thaliana]
           gi|332003291|gb|AED90674.1| signal recognition particle
           subunit [Arabidopsis thaliana]
          Length = 564

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 41/57 (71%), Positives = 52/57 (91%)
 Frame = -3

Query: 206 MGIMEGGTIPALSNLEESLKAEQKAPPGTARRKRRSGTRKQFVDSGVARPSPRGFGS 36
           MG+MEGG+IPALS LE++LKAEQKAPPGTARRKR++ +RK+FV+S  ++P PRGFGS
Sbjct: 506 MGVMEGGSIPALSGLEDALKAEQKAPPGTARRKRKADSRKKFVESASSKPGPRGFGS 562