BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004928
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564693.1| RING/U-box domain-containing protein [Arabidops...    80   3e-13
ref|NP_200445.1| RING/U-box domain-containing protein [Arabidops...    78   2e-12
ref|XP_002894508.1| zinc finger family protein [Arabidopsis lyra...    75   1e-11
ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyra...    74   3e-11
ref|XP_002525456.1| zinc finger protein, putative [Ricinus commu...    74   3e-11

>ref|NP_564693.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|15983408|gb|AAL11572.1|AF424578_1 At1g55530/T5A14_7
           [Arabidopsis thaliana] gi|4204263|gb|AAD10644.1| Unknown
           protein [Arabidopsis thaliana]
           gi|14517546|gb|AAK62663.1| At1g55530/T5A14_7
           [Arabidopsis thaliana] gi|23308203|gb|AAN18071.1|
           At1g55530/T5A14_7 [Arabidopsis thaliana]
           gi|332195138|gb|AEE33259.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 351

 Score = 80.5 bits (197), Expect = 3e-13
 Identities = 34/49 (69%), Positives = 40/49 (81%)
 Frame = +1

Query: 316 MGEALVARYWCHMCSQMVSPVMEVEMKCPFCDSGFVEEVEGRGDFDSAE 462
           M EA+V RYWCHMCSQ V+PVME E+KCPFC SGFVEE+E   D DS++
Sbjct: 1   MEEAVVTRYWCHMCSQTVNPVMEAEIKCPFCQSGFVEEMEDDDDHDSSD 49


>ref|NP_200445.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|10177832|dbj|BAB11261.1| unnamed protein product
           [Arabidopsis thaliana] gi|17380898|gb|AAL36261.1|
           unknown protein [Arabidopsis thaliana]
           gi|20259581|gb|AAM14133.1| unknown protein [Arabidopsis
           thaliana] gi|332009368|gb|AED96751.1| RING/U-box
           domain-containing protein [Arabidopsis thaliana]
          Length = 396

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +1

Query: 316 MGEALVARYWCHMCSQMVSPVMEVEMKCPFCDSGFVEEVEGRG 444
           M E + ARYWCHMCSQMV+PVME E+KCPFC SGF+EE+ G G
Sbjct: 1   MEETMAARYWCHMCSQMVNPVMESEIKCPFCQSGFIEEMSGNG 43


>ref|XP_002894508.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340350|gb|EFH70767.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 33/49 (67%), Positives = 38/49 (77%)
 Frame = +1

Query: 316 MGEALVARYWCHMCSQMVSPVMEVEMKCPFCDSGFVEEVEGRGDFDSAE 462
           M EA+  RYWCHMCSQ V PVME E+KCPFC SGFVEE+E   D DS++
Sbjct: 1   MEEAIATRYWCHMCSQTVDPVMEAEIKCPFCQSGFVEEMED-DDHDSSD 48


>ref|XP_002864451.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310286|gb|EFH40710.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 395

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = +1

Query: 316 MGEALVARYWCHMCSQMVSPVMEVEMKCPFCDSGFVEEVEG 438
           M E + +RYWCHMCSQMV+P+ME E+KCPFC SGF+EE+ G
Sbjct: 1   MEETMASRYWCHMCSQMVNPIMESEIKCPFCQSGFIEEMSG 41


>ref|XP_002525456.1| zinc finger protein, putative [Ricinus communis]
           gi|223535269|gb|EEF36946.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 348

 Score = 73.9 bits (180), Expect = 3e-11
 Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 2/56 (3%)
 Frame = +1

Query: 316 MGEALVARYWCHMCSQMVSPVMEVEMKCPFCDSGFVEEVEGRGDFDS--AEMVSDR 477
           MG+ +V RYWCHMCS+MV+PVME E+KCP C++GFVEE+    D ++   + VS+R
Sbjct: 1   MGDEMVDRYWCHMCSRMVTPVMEAEIKCPLCENGFVEEIGSTRDLNNNGIDFVSER 56