BLASTX nr result

ID: Dioscorea21_contig00004907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004907
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301091.1| predicted protein [Populus trichocarpa] gi|2...   107   4e-21
ref|XP_003544242.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   106   1e-20
ref|XP_003518257.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   105   2e-20
ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   100   7e-19
emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]   100   7e-19

>ref|XP_002301091.1| predicted protein [Populus trichocarpa] gi|222842817|gb|EEE80364.1|
           predicted protein [Populus trichocarpa]
          Length = 1095

 Score =  107 bits (268), Expect = 4e-21
 Identities = 82/256 (32%), Positives = 116/256 (45%), Gaps = 6/256 (2%)
 Frame = -2

Query: 766 RCAVCFSPTTTRCSRCKAVRYCSGKCQIIHWRQGHKDDCHPPQNDYCHNVQISSSDAIGE 587
           +C VCF P TTRCSRCKAVRYCSGKCQIIHWRQGHK++C  P   Y  N    +      
Sbjct: 37  QCVVCFCPRTTRCSRCKAVRYCSGKCQIIHWRQGHKEECRRPPTTYHINDDGGNPGQRAA 96

Query: 586 HGNQSDVYE-----NSVETFSARPTQSESKCS-SESFGKHDNFANQDGTFGVAXXXXXXX 425
             +Q D+Y+       +ETFS  P  S+S  S   S  K D+                  
Sbjct: 97  KQDQHDIYDGRYEKRPIETFSVEPVVSDSSYSPGVSLLKDDDI----------------- 139

Query: 424 XXSETLLSDVLPDNHAEMPGPLPCDASDHNSREVLGDSQLKSVQATHSVVVSESISVNDG 245
              +++L     D+ +E PG      S        G S   + +++ SV VSESIS N+ 
Sbjct: 140 -IVDSVLDTEGADSISESPGTSFSGFSTPTGSSFSGFSAHSNGESSDSVSVSESISSNE- 197

Query: 244 SCLNDSNQSIPSLKSEDVKSQESVPSMPSTSIGPSKDTTGCREGAHNLKVAETAQESDSV 65
                S++  P+  + D   + SV  + +T     K  T         K++++   +D  
Sbjct: 198 --TEGSDRQTPADIAPDT-LESSVNEVATTKPSSPKFATLVDSIGSFNKLSKSNHGNDRE 254

Query: 64  KPQFSDSKSIQLGAGS 17
               S S S  + AG+
Sbjct: 255 SQCSSSSSSHSISAGN 270


>ref|XP_003544242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
           max]
          Length = 1045

 Score =  106 bits (264), Expect = 1e-20
 Identities = 50/111 (45%), Positives = 65/111 (58%), Gaps = 7/111 (6%)
 Frame = -2

Query: 811 VYVWGSVVEKEIERPRCAVCFSPTTTRCSRCKAVRYCSGKCQIIHWRQGHKDDCHPPQ-- 638
           VY    +V    +   CAVC+SPTTTRC+RCKAV YCSGKCQI+HWRQGHKD CHPP   
Sbjct: 65  VYQQNGIVSAPPKNKVCAVCYSPTTTRCARCKAVHYCSGKCQIVHWRQGHKDKCHPPSPT 124

Query: 637 ---NDYCHNV--QISSSDAIGEHGNQSDVYENSVETFSARPTQSESKCSSE 500
               D   ++  +++  D  G H  +S        T S +P  S+ +CS +
Sbjct: 125 CQTEDLVSDLGKKVAEPDYRGIHDEKSQTKSTEYATSSEKPPLSDMRCSPD 175


>ref|XP_003518257.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
           max]
          Length = 1036

 Score =  105 bits (262), Expect = 2e-20
 Identities = 52/114 (45%), Positives = 69/114 (60%), Gaps = 8/114 (7%)
 Frame = -2

Query: 817 SLVYVWGSVVEKEIERPR-CAVCFSPTTTRCSRCKAVRYCSGKCQIIHWRQGHKDDCHPP 641
           +L Y    VV  E+ R + CAVC+SPTTTRC+RCKAV YCSGKCQI+HWRQ HKD CHPP
Sbjct: 63  ALYYHQYRVVSGELPRDKVCAVCYSPTTTRCARCKAVHYCSGKCQIVHWRQDHKDKCHPP 122

Query: 640 Q-----NDYCHNV--QISSSDAIGEHGNQSDVYENSVETFSARPTQSESKCSSE 500
                  D   ++  +++  D  G H  +S +      T S +P  S+ +CS +
Sbjct: 123 SPTCQTEDLVSDLGKKVAEPDYRGVHDEKSQIKSREYATSSDKPLLSDMRCSPD 176


>ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
           vinifera]
          Length = 1213

 Score =  100 bits (249), Expect = 7e-19
 Identities = 71/254 (27%), Positives = 101/254 (39%), Gaps = 15/254 (5%)
 Frame = -2

Query: 766 RCAVCFSPTTTRCSRCKAVRYCSGKCQIIHWRQGHKDDCHPPQNDYCHNVQISSSDAIGE 587
           +CAVC+ PTTTRC+RCKAVRYCSGKCQIIHWRQGHK++C+PP   +    +  SS     
Sbjct: 68  QCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHKEECNPPSITHQIIDESISSSQKAV 127

Query: 586 HGNQSDVYEN-----------SVETFSARPTQSESKCSSESFGKHDNFANQDGTFGVAXX 440
              +  +Y+N            +ETF + P  S+  CS E                    
Sbjct: 128 KQEKHAIYDNRLETEGQQCVKPIETFLSEPAFSKPNCSPE-------------------- 167

Query: 439 XXXXXXXSETLLSDVLPDNHAEMPGPLPCDASDHNSREVLGDSQLKSVQATHSVVVSESI 260
                                     + C+  DH   E L D  +    +  S       
Sbjct: 168 --------------------------VSCEEDDHIKVEFLADGNVSDSTSKSSSTSFSGF 201

Query: 259 SVNDGSCLNDSNQSIPSLKSE---DVKSQESVPSM-PSTSIGPSKDTTGCREGAHNLKVA 92
           S +        N S+ +  SE   DV   ES+ S  P  S G   D +   E   ++   
Sbjct: 202 STSTDRAEPSDNVSVSTTSSELSDDVSVSESINSYDPEKSDGHKSDDSAMPETISSI--- 258

Query: 91  ETAQESDSVKPQFS 50
               +++   P+F+
Sbjct: 259 -NTHQNEPFSPEFT 271


>emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
          Length = 1225

 Score =  100 bits (249), Expect = 7e-19
 Identities = 71/254 (27%), Positives = 101/254 (39%), Gaps = 15/254 (5%)
 Frame = -2

Query: 766 RCAVCFSPTTTRCSRCKAVRYCSGKCQIIHWRQGHKDDCHPPQNDYCHNVQISSSDAIGE 587
           +CAVC+ PTTTRC+RCKAVRYCSGKCQIIHWRQGHK++C+PP   +    +  SS     
Sbjct: 68  QCAVCYCPTTTRCARCKAVRYCSGKCQIIHWRQGHKEECNPPSITHQIIDESISSSQKAV 127

Query: 586 HGNQSDVYEN-----------SVETFSARPTQSESKCSSESFGKHDNFANQDGTFGVAXX 440
              +  +Y+N            +ETF + P  S+  CS E                    
Sbjct: 128 KQEKHAIYDNRLETEGQQCVKPIETFLSEPAFSKPNCSPE-------------------- 167

Query: 439 XXXXXXXSETLLSDVLPDNHAEMPGPLPCDASDHNSREVLGDSQLKSVQATHSVVVSESI 260
                                     + C+  DH   E L D  +    +  S       
Sbjct: 168 --------------------------VSCEEDDHIKVEFLADGNVSDSTSKSSSTSFSGF 201

Query: 259 SVNDGSCLNDSNQSIPSLKSE---DVKSQESVPSM-PSTSIGPSKDTTGCREGAHNLKVA 92
           S +        N S+ +  SE   DV   ES+ S  P  S G   D +   E   ++   
Sbjct: 202 STSTDRAEPSDNVSVSTTSSELSDDVSVSESINSYDPEKSDGHKSDDSAMPETISSI--- 258

Query: 91  ETAQESDSVKPQFS 50
               +++   P+F+
Sbjct: 259 -NTHQNEPFSPEFT 271


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