BLASTX nr result
ID: Dioscorea21_contig00004904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00004904
(1967 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264... 284 5e-74
ref|XP_002518375.1| ring finger protein, putative [Ricinus commu... 259 2e-66
ref|XP_002458284.1| hypothetical protein SORBIDRAFT_03g030660 [S... 253 1e-64
gb|AFW83507.1| putative RING zinc finger domain superfamily prot... 248 4e-63
gb|ACG28915.1| RING-finger protein like [Zea mays] 246 2e-62
>ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264059 [Vitis vinifera]
Length = 543
Score = 284 bits (727), Expect = 5e-74
Identities = 201/569 (35%), Positives = 277/569 (48%), Gaps = 23/569 (4%)
Frame = +1
Query: 91 MGQRNIQCSYQMPLLKSGHDQTLFYQDHGI------PQPNMVNHTSQSVRPEIAVPGTTA 252
MGQRN+ C+ QM L+ Q H + PQPNM ++ PG ++
Sbjct: 1 MGQRNMMCTGQMIDLQMDERN----QGHHVISVTNFPQPNM--------HSMLSAPGNSS 48
Query: 253 DIGLNQFRNHHDMNKNQYGV-----IQSPHLVTNTDFSGTVPLNPDNRPQVPSFAC--FS 411
+ + H+D + YG+ +Q H V + D N N PS F
Sbjct: 49 NFDVRHLPEHYDGSAMFYGIGQYNGVQHHHPVPSLDIGVAPGSNIYNPYLTPSSGNRGFP 108
Query: 412 VSRDDGPADEFPSFSMSRLVGVGMDEYGRHNSFADYVRASCKRKNAAVVPGN-HFHDGLN 588
VS + GP+D+ PS S ++GV DEYGR N F D VR +CKRKNA + GN + +GL
Sbjct: 109 VSINHGPSDQLPSSSNHGVIGVSTDEYGRENHFMDGVRGACKRKNAEGILGNFQYINGLA 168
Query: 589 XXXXXXXXXXXITEQPLWNEPYESGINLLNPSTATPAVYGGINALQATE-GSRRNLWSRS 765
+ P ESG+++++ ++ Y G NA E GS R++ +RS
Sbjct: 169 SSSS--------SVPPFNTRHLESGVSMMDSASFAQPQYRGNNAPSIMEVGSHRSVRNRS 220
Query: 766 NGATIQPDSSVVHHSNYLHQGNCIGQSAPPD-NSWM-APFGNNAGGGGCSNWSNPHAVAH 939
+ DS + H+ N+L QGN IG P N W+ GNN GG W++ A+ +
Sbjct: 221 GAVGL--DSVLAHNHNHLVQGNYIGHPFQPSGNPWVDQQSGNNGSDGGTLAWNHGPALPY 278
Query: 940 LQGRYFSSRDVELANMGVQGYQEIPFNANSAFLFQSAPMPNPAPIPNFHHHLAPLHSIQV 1119
L G S E N+G+QGY + +S Q + P + H+ P +Q
Sbjct: 279 LHGSNISGGSREAGNVGIQGYHDTSSGRSSTNYLQPPVLHRPHTL---HYPPPPPPPMQG 335
Query: 1120 QNYGQHINFPAPPYQLPLHSF---CPTTSNPSFNPLDSGNRFLPCPPPNAKLICGPLQQP 1290
H A Y+LP S P P G P PP ++
Sbjct: 336 ARSHFHPQVVASSYRLPTISSRGPVPPQVGVEAGPRHPG----PVPPTGIRIYRSNRGGV 391
Query: 1291 QTAVSVSHRNL---RILSTEDPAVLELPRFYGVGDVTDQHRDMRLDIDDMTYEELLALEE 1461
+ H NL R+L E+ A+L+L FY VGD+ D HRDMRLDI+DM+YEELLAL E
Sbjct: 392 APEATSRHHNLPYLRMLPAEEVAILDLSAFYEVGDLIDHHRDMRLDIEDMSYEELLALGE 451
Query: 1462 QIGDVSTGLTEESILQNLKTSFHITXXXXXXXXXXXXXFPENETCSICQVEYEESERLGT 1641
+IG VSTGL+EESI LKT +I+ EN++C ICQ EY E++G
Sbjct: 452 RIGHVSTGLSEESITNCLKTRTYISSTCLNLEEAASMDL-ENDSCIICQEEYRNQEKIGF 510
Query: 1642 LNCGHKYHADCIKQWLLVKNLCPICKTSA 1728
L+CGH+YHA C+K+WLLVKN+CPICK A
Sbjct: 511 LDCGHEYHAGCLKKWLLVKNVCPICKAPA 539
>ref|XP_002518375.1| ring finger protein, putative [Ricinus communis]
gi|223542470|gb|EEF44011.1| ring finger protein, putative
[Ricinus communis]
Length = 549
Score = 259 bits (662), Expect = 2e-66
Identities = 191/571 (33%), Positives = 275/571 (48%), Gaps = 22/571 (3%)
Frame = +1
Query: 91 MGQRNIQCSYQMPLLKSGHD-QTLFYQDHGIPQPNMVNHTSQSVRPEIAVPGTTADIGLN 267
MGQRN+ C+ QM L+ Q + + I + N ++ + G+T +I +
Sbjct: 1 MGQRNMLCTSQMIDLEVDRQGQGYLHPEPCILLGGVSNFPQSDIQTMVTASGSTTNIDAH 60
Query: 268 QFRNHHDMN-----KNQYGVIQSP-HLVTNTDFSGTVPLNPDNRPQVPSFACFSVSRDDG 429
+ H+D +GV P H N D N PS + G
Sbjct: 61 RLPEHYDSAIFYGMPQYHGVQHHPQHHAPNLDLGVATASNFYVPYMTPSSG---IPLSHG 117
Query: 430 PADEFPSFSMSRLVGVGMDEYGRHNSFADYVRASCKRKNAAVVPGNHFHDGLNXXXXXXX 609
D PS + ++GV DEYG +N F D R S KRKNA PGN + +
Sbjct: 118 SCDHLPSSTSYGVIGVSGDEYGMNNHFMDNARGSYKRKNAEGNPGNFQYVNASAG----- 172
Query: 610 XXXXITEQPLWNEPYESGINLLNPSTATPAVYGGINALQATE-GSRRNLWSRSNGATIQP 786
+ + + + GI+L++ S+ Y G L E GS R++ +RS ++
Sbjct: 173 -----SSSSVLSTRHPDGISLMDASSFASPQYRGNGILSIREVGSHRSVRNRSGATGLE- 226
Query: 787 DSSVVHHSNYLHQGNCIGQSAPPDNSWMAPFGNNAGGGGCSNWSNPHAVAHLQGRYFSSR 966
S + H N+ QGN IGQ P S A +++ G W+ A+ ++ G +
Sbjct: 227 -SVLAHSQNHFIQGNYIGQPFQPAGSLWADQHSSSSDAGTLAWNQNPAINYMHGNNVNGG 285
Query: 967 DVELANMGVQGYQEIPFN-ANSAFLFQSAPMPNPAPIPNFHHHLAPLHSIQVQNYGQHIN 1143
VE ++ Q Y E+ N +N+ FL P P NFHH L P+ ++ G ++N
Sbjct: 286 SVETGSIVPQRYHELSSNRSNTTFLH---PSPPNIRHHNFHHPLPPIQGMR----GHNLN 338
Query: 1144 FPAPPYQLPLHSFCPTTS-------NPSFNPLDSGNRFLPCPPPNAKLICGPLQQ---PQ 1293
P Q+ SF TS NPS + LD G R P I P + P+
Sbjct: 339 VPP---QVSAASFRGLTSYASQSNVNPSQDGLDIGVRHPGSVQPTGLRIYRPHRDGVIPE 395
Query: 1294 TAVSVSHRNL---RILSTEDPAVLELPRFYGVGDVTDQHRDMRLDIDDMTYEELLALEEQ 1464
T ++ HRNL R+L T+ AVLE P +Y V + D H DMRLDI+DM+YEELLAL E+
Sbjct: 396 T--TLRHRNLPHLRVLPTDRIAVLEFPDYYEVENYVDHHSDMRLDIEDMSYEELLALGER 453
Query: 1465 IGDVSTGLTEESILQNLKTSFHITXXXXXXXXXXXXXFPENETCSICQVEYEESERLGTL 1644
IG V+TGL+EE+I LKT +++ E +C ICQ EY+ E++GTL
Sbjct: 454 IGSVNTGLSEETIRSQLKTRKYLSSPMSINLEEITCMDQELGSCIICQDEYKSKEKIGTL 513
Query: 1645 NCGHKYHADCIKQWLLVKNLCPICKTSAFAS 1737
+CGH+YHADC+K+WL VKN+CPICK+ A S
Sbjct: 514 DCGHEYHADCLKKWLRVKNVCPICKSEALPS 544
>ref|XP_002458284.1| hypothetical protein SORBIDRAFT_03g030660 [Sorghum bicolor]
gi|241930259|gb|EES03404.1| hypothetical protein
SORBIDRAFT_03g030660 [Sorghum bicolor]
Length = 521
Score = 253 bits (647), Expect = 1e-64
Identities = 184/558 (32%), Positives = 265/558 (47%), Gaps = 5/558 (0%)
Frame = +1
Query: 91 MGQRNIQCSYQMPLLKSGHDQTLFYQDHGIPQPNMVNHTSQSVRPEIAVPGTTADIGLNQ 270
M RN+ C+ Q+ L S Q IP+ Q + + V G ++GL+
Sbjct: 1 MAFRNMVCTPQVIDLTSERGQAQGGNGSEIPE--------QGAQHAVRVVGNGTNVGLSG 52
Query: 271 FRNHHDMNKNQYGV-IQSPHLVTNTDFSGTVPLNPDNRPQVPSFACFSVSRDDGPADEFP 447
R+++D++ N + + +P D N N P + S++R A F
Sbjct: 53 VRSYYDVSINHHHQPVHNPPPNLGVDSGFVFASNMYN----PCMSSTSINRHVSHAQSFG 108
Query: 448 SFSMS---RLVGVGMDEYGRHNSFADYVRASCKRKNAAVVPGNHFHDGLNXXXXXXXXXX 618
S + + V MDE R++S + R KRKNAAV F +G
Sbjct: 109 SGNQTLPLNQVPGSMDESSRNDSVGESARDHIKRKNAAVAGSYPFVNGFASSSSSSHAPQ 168
Query: 619 XITEQPLWNEPYESGINLLNPSTATPAVYGGINALQATEGSRRNLWSRSNGATIQPDSSV 798
+P W+ +ES ++ N + P+ Y G ++ + EGS + N + P+S
Sbjct: 169 NPMLRP-WDPSFESTVSS-NVAPFNPSEYHGHSSWPSLEGSSIAGTNGFNSMAVHPES-- 224
Query: 799 VHHSNYLHQGNCIGQSAPPDNSWMAPFGNNAGGGGCSNWSNPHAVAHLQGRYFSSRDVEL 978
V NY N IG +SWM P N G W +A ++QGR+ S E+
Sbjct: 225 VQRGNYTFPSNHIG------HSWM-PHATNGIADGVPQWEYVNATTNIQGRFAHSGATEI 277
Query: 979 ANMGVQGYQEIPFNANSAFLFQSAPMPNPAPIPNFHHHLAPLHSIQVQNYGQHINFPAPP 1158
AN G Q YQ P + P+P FH H +H +Q N P
Sbjct: 278 ANGGFQEYQNGPSTVSRG------------PVPYFHQHA--MHGMQAHNLLDPTQMQVPY 323
Query: 1159 YQLPLHSFCPTTSNPSFNPLDSGNRFLPCPPPNAKLICGPLQQPQTAVSVSHRNLRILST 1338
Q + N N L G R +P + + GP Q P A V+HRN+RIL
Sbjct: 324 QQCHNNGVLHGGVNYPGNRLHLGPR-IPVLFSSPERTFGPPQHPFLANPVNHRNIRILPP 382
Query: 1339 EDPA-VLELPRFYGVGDVTDQHRDMRLDIDDMTYEELLALEEQIGDVSTGLTEESILQNL 1515
E A +++ R Y V + D+HRDMRLDID MTYEELLALEEQIGDV+TGLT+ I+ L
Sbjct: 383 EQHATIMDFSRLYEVSNTVDEHRDMRLDIDSMTYEELLALEEQIGDVNTGLTKSHIVDKL 442
Query: 1516 KTSFHITXXXXXXXXXXXXXFPENETCSICQVEYEESERLGTLNCGHKYHADCIKQWLLV 1695
+TS ++ EN+ C ICQ EY+ + +GTL+CGH+YHA+C+KQWL+V
Sbjct: 443 RTSLYVPGTSSMPDQPSKSSL-ENDACIICQEEYQARDCVGTLDCGHRYHAECVKQWLMV 501
Query: 1696 KNLCPICKTSAFASDDKR 1749
KNLCPICKT+A +++ ++
Sbjct: 502 KNLCPICKTTALSANRRQ 519
>gb|AFW83507.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 520
Score = 248 bits (633), Expect = 4e-63
Identities = 182/560 (32%), Positives = 265/560 (47%), Gaps = 7/560 (1%)
Frame = +1
Query: 91 MGQRNIQCSYQMPLLKSGHDQTLFYQDHGIPQPNMVNHTSQSVRPEIAVPGTTADIGLNQ 270
M RN+ C+ Q+ L S ++ +G + Q + + V G +IGL+
Sbjct: 1 MAFRNMVCTPQVINLTSDSERGQAQGGNGS------EISEQGAQHAVRVVGNAMNIGLSG 54
Query: 271 FRNHHDMNKNQYGV-IQSPHLVTNTDFSGTVPLNPDNRPQVPSFACFSVSRDDGPADEFP 447
R+++DM+ N + + +P D N N P + S++R A F
Sbjct: 55 VRSYYDMSINHHHQSVHNPPPNLGVDSGFVFASNMYN----PCMSSTSMNRHVSHAQSFG 110
Query: 448 SFSM---SRLVGVGMDEYGRHNSFADYVRASCKRKNAAVVPGNHFHDGLNXXXXXXXXXX 618
S + V MDE R++S + R KRKNAAV HF +G
Sbjct: 111 SGNQVLPQNQVPGTMDESSRNDSIGESAREHIKRKNAAVAGSYHFVNGFASSSSSSHAPQ 170
Query: 619 XITEQPLWNEPYESGINLLNPSTATPAVYGGINALQATEGSRRNLWSRSNGATIQPDS-- 792
P W+ +ES ++ N + P+ Y G N N W G++I +
Sbjct: 171 NPMLGP-WDPSFESTVSS-NVAPFNPSEYHGHN----------NSWPSLEGSSITGSNGF 218
Query: 793 -SVVHHSNYLHQGNCIGQSAPPDNSWMAPFGNNAGGGGCSNWSNPHAVAHLQGRYFSSRD 969
S+V H + + +GN +SWM+ N G W +A A++QGR+ S
Sbjct: 219 NSMVVHPDSVQRGNYTFPPTHISHSWMS-HATNGIADGVPQWEYANATANIQGRFAHSGA 277
Query: 970 VELANMGVQGYQEIPFNANSAFLFQSAPMPNPAPIPNFHHHLAPLHSIQVQNYGQHINFP 1149
E+AN+G YQ P P+P FH H +H +Q + Q
Sbjct: 278 TEIANVGFHEYQNGPSTICRG------------PVPYFHQHA--MHGMQALDPTQ---MQ 320
Query: 1150 APPYQLPLHSFCPTTSNPSFNPLDSGNRFLPCPPPNAKLICGPLQQPQTAVSVSHRNLRI 1329
P Q + F N N L G R P +++ GP Q P A V+HRN+RI
Sbjct: 321 VPYQQCHSNGFLHGGINYPGNRLQLGPRN-PVLFTSSERAFGPPQHPFLANPVNHRNIRI 379
Query: 1330 LSTEDPAVLELPRFYGVGDVTDQHRDMRLDIDDMTYEELLALEEQIGDVSTGLTEESILQ 1509
L E +++ R Y V + D+HRDMRLDID MTYEELLALEEQIGDV+TGLT+ I+
Sbjct: 380 LPPEHATIMDFSRLYEVSNTVDEHRDMRLDIDSMTYEELLALEEQIGDVNTGLTKSHIVD 439
Query: 1510 NLKTSFHITXXXXXXXXXXXXXFPENETCSICQVEYEESERLGTLNCGHKYHADCIKQWL 1689
L+TS ++ EN+ C ICQ EY+ + +GTL+CGH+YHA+C+KQWL
Sbjct: 440 KLRTSLYVPGISSMSDQPSKSSL-ENDACIICQEEYQARDCVGTLDCGHRYHAECVKQWL 498
Query: 1690 LVKNLCPICKTSAFASDDKR 1749
+VKNLCPICKT+A +++ ++
Sbjct: 499 MVKNLCPICKTTALSANRRQ 518
>gb|ACG28915.1| RING-finger protein like [Zea mays]
Length = 520
Score = 246 bits (628), Expect = 2e-62
Identities = 182/560 (32%), Positives = 264/560 (47%), Gaps = 7/560 (1%)
Frame = +1
Query: 91 MGQRNIQCSYQMPLLKSGHDQTLFYQDHGIPQPNMVNHTSQSVRPEIAVPGTTADIGLNQ 270
M RN+ C+ Q+ L S ++ +G + Q + V G +IGL+
Sbjct: 1 MAFRNMVCTPQVINLTSDSERGQAQGGNGS------EISEQGAQHAARVVGNAMNIGLSG 54
Query: 271 FRNHHDMNKNQYGV-IQSPHLVTNTDFSGTVPLNPDNRPQVPSFACFSVSRDDGPADEFP 447
R+++DM+ N + + +P D N N P + S++R A F
Sbjct: 55 VRSYYDMSINHHHQSVHNPPPNLGVDSGFVFASNMYN----PCMSSTSMNRHVSHAQSFG 110
Query: 448 SFSM---SRLVGVGMDEYGRHNSFADYVRASCKRKNAAVVPGNHFHDGLNXXXXXXXXXX 618
S + V MDE R++S + R KRKNAAV HF +G
Sbjct: 111 SGNQVLPQNQVPGTMDESSRNDSIGESAREHIKRKNAAVAGSYHFVNGFASSSSSSHAPQ 170
Query: 619 XITEQPLWNEPYESGINLLNPSTATPAVYGGINALQATEGSRRNLWSRSNGATIQPDS-- 792
P W+ +ES ++ N + P+ Y G N N W G++I +
Sbjct: 171 NPMLGP-WDPSFESTVSS-NVAPFNPSEYHGHN----------NSWPSLEGSSITGSNGF 218
Query: 793 -SVVHHSNYLHQGNCIGQSAPPDNSWMAPFGNNAGGGGCSNWSNPHAVAHLQGRYFSSRD 969
S+V H + + +GN +SWM+ N G W +A A++QGR+ S
Sbjct: 219 NSMVVHPDSVQRGNYTFPPTHISHSWMS-HATNGIADGVPQWEYANATANIQGRFAHSGA 277
Query: 970 VELANMGVQGYQEIPFNANSAFLFQSAPMPNPAPIPNFHHHLAPLHSIQVQNYGQHINFP 1149
E+AN+G YQ P P+P FH H +H +Q + Q
Sbjct: 278 TEIANVGFHEYQNGPSTICRG------------PVPYFHQHA--MHGMQALDPTQ---MQ 320
Query: 1150 APPYQLPLHSFCPTTSNPSFNPLDSGNRFLPCPPPNAKLICGPLQQPQTAVSVSHRNLRI 1329
P Q + F N N L G R P +++ GP Q P A V+HRN+RI
Sbjct: 321 VPYQQCHSNGFLHGGINYPGNRLQLGPRN-PVLFTSSERAFGPPQHPFLANPVNHRNIRI 379
Query: 1330 LSTEDPAVLELPRFYGVGDVTDQHRDMRLDIDDMTYEELLALEEQIGDVSTGLTEESILQ 1509
L E +++ R Y V + D+HRDMRLDID MTYEELLALEEQIGDV+TGLT+ I+
Sbjct: 380 LPPEHATIMDFSRLYEVSNTVDEHRDMRLDIDSMTYEELLALEEQIGDVNTGLTKSHIVD 439
Query: 1510 NLKTSFHITXXXXXXXXXXXXXFPENETCSICQVEYEESERLGTLNCGHKYHADCIKQWL 1689
L+TS ++ EN+ C ICQ EY+ + +GTL+CGH+YHA+C+KQWL
Sbjct: 440 KLRTSLYVPGISSMSDQPSKFSL-ENDACIICQEEYQVRDCVGTLDCGHRYHAECVKQWL 498
Query: 1690 LVKNLCPICKTSAFASDDKR 1749
+VKNLCPICKT+A +++ ++
Sbjct: 499 MVKNLCPICKTTALSANRRQ 518