BLASTX nr result

ID: Dioscorea21_contig00004871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004871
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20760.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_002282492.1| PREDICTED: F-box protein AFR [Vitis vinifera]      88   6e-16
emb|CAN81325.1| hypothetical protein VITISV_041844 [Vitis vinifera]    88   6e-16
ref|XP_002324389.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002878767.1| hypothetical protein ARALYDRAFT_481310 [Arab...    79   5e-13

>emb|CBI20760.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
 Frame = -2

Query: 251 RAFFSAAAISGRIIVAGGDS---HDPDTSVDRYDPNTNHWSSAAPMPQTLPLYDSAVIGH 81
           R FF+A +I+G+I  AGG      D   +V+RYDP ++ W++ A M   L  YD+AV+G+
Sbjct: 114 RTFFAAGSINGKIFAAGGRGLGVEDSIPTVERYDPVSDTWAAVAKMRSGLARYDAAVVGN 173

Query: 80  RFFVTGGWTWPFDDLPRGSFYDADKD 3
           + +VT GWTWPF   PRG  YD D+D
Sbjct: 174 KLYVTEGWTWPFSFSPRGGVYDGDRD 199


>ref|XP_002282492.1| PREDICTED: F-box protein AFR [Vitis vinifera]
          Length = 370

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
 Frame = -2

Query: 251 RAFFSAAAISGRIIVAGGDS---HDPDTSVDRYDPNTNHWSSAAPMPQTLPLYDSAVIGH 81
           R FF+A +I+G+I  AGG      D   +V+RYDP ++ W++ A M   L  YD+AV+G+
Sbjct: 162 RTFFAAGSINGKIFAAGGRGLGVEDSIPTVERYDPVSDTWAAVAKMRSGLARYDAAVVGN 221

Query: 80  RFFVTGGWTWPFDDLPRGSFYDADKD 3
           + +VT GWTWPF   PRG  YD D+D
Sbjct: 222 KLYVTEGWTWPFSFSPRGGVYDGDRD 247


>emb|CAN81325.1| hypothetical protein VITISV_041844 [Vitis vinifera]
          Length = 414

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
 Frame = -2

Query: 251 RAFFSAAAISGRIIVAGGDS---HDPDTSVDRYDPNTNHWSSAAPMPQTLPLYDSAVIGH 81
           R FF+A +I+G+I  AGG      D   +V+RYDP ++ W++ A M   L  YD+AV+G+
Sbjct: 162 RTFFAAGSINGKIFAAGGRGLGVEDSIPTVERYDPVSDTWAAVAKMRSGLARYDAAVVGN 221

Query: 80  RFFVTGGWTWPFDDLPRGSFYDADKD 3
           + +VT GWTWPF   PRG  YD D+D
Sbjct: 222 KLYVTEGWTWPFSFSPRGGVYDGDRD 247


>ref|XP_002324389.1| predicted protein [Populus trichocarpa] gi|222865823|gb|EEF02954.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = -2

Query: 251 RAFFSAAAISGRIIVAGGDSH---DPDTSVDRYDPNTNHWSSAAPMPQTLPLYDSAVIGH 81
           R+FF+   + G+II  GG +    D  T+V+ Y+  +  W  AA M   L  YDSAV+G+
Sbjct: 162 RSFFATGNVKGKIIAVGGSASGISDSITAVECYNSESGKWGPAAKMRMGLARYDSAVVGN 221

Query: 80  RFFVTGGWTWPFDDLPRGSFYDADKD 3
           R +VT GWTWPF   PR   YDADKD
Sbjct: 222 RMYVTEGWTWPFMFSPRAGIYDADKD 247


>ref|XP_002878767.1| hypothetical protein ARALYDRAFT_481310 [Arabidopsis lyrata subsp.
           lyrata] gi|297324606|gb|EFH55026.1| hypothetical protein
           ARALYDRAFT_481310 [Arabidopsis lyrata subsp. lyrata]
          Length = 360

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
 Frame = -2

Query: 251 RAFFSAAAISGRIIVAGGD---SHDPDTSVDRYDPNTNHWSSAAPMPQTLPLYDSAVIGH 81
           R +F+A  ++G+I+  GG    + +  T V+ YDP+ + W++   +P  L  YDSAVIG 
Sbjct: 156 RTYFNAGNVNGKIMAVGGSVGGNGEATTEVESYDPDNDTWTAVKKVPMVLAKYDSAVIGK 215

Query: 80  RFFVTGGWTWPFDDLPRGSFYDADKD 3
           +  VT GW WPF   P G  YD+D+D
Sbjct: 216 KMCVTEGWAWPFMFPPMGQVYDSDED 241


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