BLASTX nr result
ID: Dioscorea21_contig00004871
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00004871 (252 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI20760.3| unnamed protein product [Vitis vinifera] 88 6e-16 ref|XP_002282492.1| PREDICTED: F-box protein AFR [Vitis vinifera] 88 6e-16 emb|CAN81325.1| hypothetical protein VITISV_041844 [Vitis vinifera] 88 6e-16 ref|XP_002324389.1| predicted protein [Populus trichocarpa] gi|2... 84 2e-14 ref|XP_002878767.1| hypothetical protein ARALYDRAFT_481310 [Arab... 79 5e-13 >emb|CBI20760.3| unnamed protein product [Vitis vinifera] Length = 322 Score = 88.2 bits (217), Expect = 6e-16 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 3/86 (3%) Frame = -2 Query: 251 RAFFSAAAISGRIIVAGGDS---HDPDTSVDRYDPNTNHWSSAAPMPQTLPLYDSAVIGH 81 R FF+A +I+G+I AGG D +V+RYDP ++ W++ A M L YD+AV+G+ Sbjct: 114 RTFFAAGSINGKIFAAGGRGLGVEDSIPTVERYDPVSDTWAAVAKMRSGLARYDAAVVGN 173 Query: 80 RFFVTGGWTWPFDDLPRGSFYDADKD 3 + +VT GWTWPF PRG YD D+D Sbjct: 174 KLYVTEGWTWPFSFSPRGGVYDGDRD 199 >ref|XP_002282492.1| PREDICTED: F-box protein AFR [Vitis vinifera] Length = 370 Score = 88.2 bits (217), Expect = 6e-16 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 3/86 (3%) Frame = -2 Query: 251 RAFFSAAAISGRIIVAGGDS---HDPDTSVDRYDPNTNHWSSAAPMPQTLPLYDSAVIGH 81 R FF+A +I+G+I AGG D +V+RYDP ++ W++ A M L YD+AV+G+ Sbjct: 162 RTFFAAGSINGKIFAAGGRGLGVEDSIPTVERYDPVSDTWAAVAKMRSGLARYDAAVVGN 221 Query: 80 RFFVTGGWTWPFDDLPRGSFYDADKD 3 + +VT GWTWPF PRG YD D+D Sbjct: 222 KLYVTEGWTWPFSFSPRGGVYDGDRD 247 >emb|CAN81325.1| hypothetical protein VITISV_041844 [Vitis vinifera] Length = 414 Score = 88.2 bits (217), Expect = 6e-16 Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 3/86 (3%) Frame = -2 Query: 251 RAFFSAAAISGRIIVAGGDS---HDPDTSVDRYDPNTNHWSSAAPMPQTLPLYDSAVIGH 81 R FF+A +I+G+I AGG D +V+RYDP ++ W++ A M L YD+AV+G+ Sbjct: 162 RTFFAAGSINGKIFAAGGRGLGVEDSIPTVERYDPVSDTWAAVAKMRSGLARYDAAVVGN 221 Query: 80 RFFVTGGWTWPFDDLPRGSFYDADKD 3 + +VT GWTWPF PRG YD D+D Sbjct: 222 KLYVTEGWTWPFSFSPRGGVYDGDRD 247 >ref|XP_002324389.1| predicted protein [Populus trichocarpa] gi|222865823|gb|EEF02954.1| predicted protein [Populus trichocarpa] Length = 366 Score = 83.6 bits (205), Expect = 2e-14 Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 3/86 (3%) Frame = -2 Query: 251 RAFFSAAAISGRIIVAGGDSH---DPDTSVDRYDPNTNHWSSAAPMPQTLPLYDSAVIGH 81 R+FF+ + G+II GG + D T+V+ Y+ + W AA M L YDSAV+G+ Sbjct: 162 RSFFATGNVKGKIIAVGGSASGISDSITAVECYNSESGKWGPAAKMRMGLARYDSAVVGN 221 Query: 80 RFFVTGGWTWPFDDLPRGSFYDADKD 3 R +VT GWTWPF PR YDADKD Sbjct: 222 RMYVTEGWTWPFMFSPRAGIYDADKD 247 >ref|XP_002878767.1| hypothetical protein ARALYDRAFT_481310 [Arabidopsis lyrata subsp. lyrata] gi|297324606|gb|EFH55026.1| hypothetical protein ARALYDRAFT_481310 [Arabidopsis lyrata subsp. lyrata] Length = 360 Score = 78.6 bits (192), Expect = 5e-13 Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 3/86 (3%) Frame = -2 Query: 251 RAFFSAAAISGRIIVAGGD---SHDPDTSVDRYDPNTNHWSSAAPMPQTLPLYDSAVIGH 81 R +F+A ++G+I+ GG + + T V+ YDP+ + W++ +P L YDSAVIG Sbjct: 156 RTYFNAGNVNGKIMAVGGSVGGNGEATTEVESYDPDNDTWTAVKKVPMVLAKYDSAVIGK 215 Query: 80 RFFVTGGWTWPFDDLPRGSFYDADKD 3 + VT GW WPF P G YD+D+D Sbjct: 216 KMCVTEGWAWPFMFPPMGQVYDSDED 241