BLASTX nr result

ID: Dioscorea21_contig00004822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004822
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO33072.1| hypothetical protein [Amblyomma maculatum]             362   6e-98
ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [...   355   1e-95
ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|2...   353   3e-95
ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|1...   348   1e-93
gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90...   348   2e-93

>gb|AEO33072.1| hypothetical protein [Amblyomma maculatum]
          Length = 262

 Score =  362 bits (930), Expect = 6e-98
 Identities = 179/222 (80%), Positives = 196/222 (88%)
 Frame = +1

Query: 85  RPVTLSXXXXXXXXXXEAIVSSIKKALEDYSSVYVFTFENMRNQRFKEFREQMKSNSRFF 264
           + VTLS          E IVSSIK+ALED+ S YVFTFENMRNQ+FKEFREQ+KSNSRFF
Sbjct: 41  KAVTLSKTKKKGRQHKEVIVSSIKQALEDHGSAYVFTFENMRNQKFKEFREQLKSNSRFF 100

Query: 265 LGANKVMQFSLGRSAADEGKPGIHKLSKFIQGDSGLFFTNLGRDEVQRLFEGYEEHDFAR 444
           LG+NKVMQ SLGRS ADE KPGIHKLSKF++GD+GL FTNL ++EVQR FE YE+HDFAR
Sbjct: 101 LGSNKVMQISLGRSVADETKPGIHKLSKFLRGDAGLLFTNLEKEEVQRTFEKYEDHDFAR 160

Query: 445 TGALATETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVIELVSDFVVCEEGKPLSPES 624
           TG+ ATE VELKEGPLEQFTHEMEPFLRKQG+PVRL KGV+ELVSDFVVCEEGKPLSPES
Sbjct: 161 TGSNATEKVELKEGPLEQFTHEMEPFLRKQGMPVRLTKGVVELVSDFVVCEEGKPLSPES 220

Query: 625 ARTLRLLGVKMATFRLHLVCRWSPDDFEVYREGLDLSDIESS 750
           AR LRLLG+KMA FRLHLVCRW+PDDFEVYREGLDLSDIESS
Sbjct: 221 ARILRLLGIKMAPFRLHLVCRWTPDDFEVYREGLDLSDIESS 262


>ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera]
           gi|298204604|emb|CBI23879.3| unnamed protein product
           [Vitis vinifera]
          Length = 229

 Score =  355 bits (910), Expect = 1e-95
 Identities = 170/229 (74%), Positives = 202/229 (88%)
 Frame = +1

Query: 64  MPKSKRDRPVTLSXXXXXXXXXXEAIVSSIKKALEDYSSVYVFTFENMRNQRFKEFREQM 243
           MPKSKRDRPVTLS          E+IV+SI++A+E+YSS+YVF+FENMRN +FKEFRE++
Sbjct: 1   MPKSKRDRPVTLSKTKKKGRGHKESIVNSIRQAVENYSSIYVFSFENMRNLKFKEFREKL 60

Query: 244 KSNSRFFLGANKVMQFSLGRSAADEGKPGIHKLSKFIQGDSGLFFTNLGRDEVQRLFEGY 423
           KS SRFFLG+NKVMQ ++GRS ADE +PG+ K+SK + GD+GLFFTNL ++EVQRLF  Y
Sbjct: 61  KSTSRFFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGDTGLFFTNLPKEEVQRLFNEY 120

Query: 424 EEHDFARTGALATETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVIELVSDFVVCEEG 603
           EE+DFARTG+ A E VELKEGPL+QFTHEMEPFLRKQG+PVRLNKGV+ELVSDFVVCEEG
Sbjct: 121 EEYDFARTGSTAVEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180

Query: 604 KPLSPESARTLRLLGVKMATFRLHLVCRWSPDDFEVYREGLDLSDIESS 750
            PLSPESAR LRLLG+KMATFRLHLVCRWSPD+F++Y+EGLD SD+ESS
Sbjct: 181 TPLSPESARILRLLGIKMATFRLHLVCRWSPDEFDLYKEGLDDSDVESS 229


>ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|222860140|gb|EEE97687.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  353 bits (907), Expect = 3e-95
 Identities = 173/229 (75%), Positives = 199/229 (86%)
 Frame = +1

Query: 64  MPKSKRDRPVTLSXXXXXXXXXXEAIVSSIKKALEDYSSVYVFTFENMRNQRFKEFREQM 243
           MPKSKR+RPVTLS          E+IV+SI+ A+E Y+S+YVF+FENMRN +FKEFREQ 
Sbjct: 1   MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60

Query: 244 KSNSRFFLGANKVMQFSLGRSAADEGKPGIHKLSKFIQGDSGLFFTNLGRDEVQRLFEGY 423
           K  SRFFLG+NKVMQ SLGRSAADE +PG+HK+SK + GDSGLF TNL R+EV+RLF  Y
Sbjct: 61  KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDSGLFLTNLSREEVERLFNEY 120

Query: 424 EEHDFARTGALATETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVIELVSDFVVCEEG 603
           EE+DFARTG  ATE VELKEGPLEQFTHEMEPFLRKQG+PVRLNKGVI+LVS+FVVCEEG
Sbjct: 121 EEYDFARTGTTATEMVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIDLVSNFVVCEEG 180

Query: 604 KPLSPESARTLRLLGVKMATFRLHLVCRWSPDDFEVYREGLDLSDIESS 750
           KPLSPES+R LRLLG KMATFRLHL+CRWSP+DFE+YREGLD SD+ES+
Sbjct: 181 KPLSPESSRILRLLGTKMATFRLHLICRWSPEDFELYREGLDESDVESA 229


>ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|118486150|gb|ABK94918.1|
           unknown [Populus trichocarpa]
           gi|222846270|gb|EEE83817.1| predicted protein [Populus
           trichocarpa]
          Length = 229

 Score =  348 bits (894), Expect = 1e-93
 Identities = 172/229 (75%), Positives = 197/229 (86%)
 Frame = +1

Query: 64  MPKSKRDRPVTLSXXXXXXXXXXEAIVSSIKKALEDYSSVYVFTFENMRNQRFKEFREQM 243
           MPKSKR+RPVTLS          E+IV+SI+ A+E Y+S+YVF+FENMRN +FKEFREQ 
Sbjct: 1   MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60

Query: 244 KSNSRFFLGANKVMQFSLGRSAADEGKPGIHKLSKFIQGDSGLFFTNLGRDEVQRLFEGY 423
           K  SRFFLG+NKVMQ SLGRSAADE +PG+HK+SK + GD+GLF TNL R+EV+RLF  Y
Sbjct: 61  KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDAGLFLTNLPREEVERLFNEY 120

Query: 424 EEHDFARTGALATETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVIELVSDFVVCEEG 603
           EE+DFARTG  ATETVELKEGPLEQFTHEMEPFLRKQG+PVRLNKGVIELVSDFVV EEG
Sbjct: 121 EEYDFARTGTTATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIELVSDFVVSEEG 180

Query: 604 KPLSPESARTLRLLGVKMATFRLHLVCRWSPDDFEVYREGLDLSDIESS 750
           KPLSPE AR LRLLG K ATF+LHL+CRWSP+DFE+YREGLD SD+ES+
Sbjct: 181 KPLSPECARILRLLGTKTATFKLHLICRWSPEDFELYREGLDDSDVESA 229


>gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative
           ribosomal protein L1 [Solanum tuberosum]
          Length = 229

 Score =  348 bits (892), Expect = 2e-93
 Identities = 168/229 (73%), Positives = 198/229 (86%)
 Frame = +1

Query: 64  MPKSKRDRPVTLSXXXXXXXXXXEAIVSSIKKALEDYSSVYVFTFENMRNQRFKEFREQM 243
           MPKSKR+R VTLS          E IV+SI++  E YSS YVF+FENMRN +FKEFR+Q+
Sbjct: 1   MPKSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQL 60

Query: 244 KSNSRFFLGANKVMQFSLGRSAADEGKPGIHKLSKFIQGDSGLFFTNLGRDEVQRLFEGY 423
           KS+SRFFLG+NKVMQ +LGRS +DE +PG+HK+SK ++GDSGL FTNL ++EVQRLF  Y
Sbjct: 61  KSSSRFFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGDSGLCFTNLSKEEVQRLFNEY 120

Query: 424 EEHDFARTGALATETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVIELVSDFVVCEEG 603
           EEHDFARTG  ATE VEL+EGPL+QFTHEMEPFLRKQG+PVRLN+GV+ELVSDFVVCEEG
Sbjct: 121 EEHDFARTGTTATEKVELQEGPLDQFTHEMEPFLRKQGMPVRLNRGVVELVSDFVVCEEG 180

Query: 604 KPLSPESARTLRLLGVKMATFRLHLVCRWSPDDFEVYREGLDLSDIESS 750
           +PLSPE+AR LRLLG KMATFRLHL+CRWSPD+FE+YREGL+ SDIESS
Sbjct: 181 RPLSPEAARILRLLGKKMATFRLHLICRWSPDEFEIYREGLEESDIESS 229


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