BLASTX nr result
ID: Dioscorea21_contig00004822
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00004822 (1041 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEO33072.1| hypothetical protein [Amblyomma maculatum] 362 6e-98 ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [... 355 1e-95 ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|2... 353 3e-95 ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|1... 348 1e-93 gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90... 348 2e-93 >gb|AEO33072.1| hypothetical protein [Amblyomma maculatum] Length = 262 Score = 362 bits (930), Expect = 6e-98 Identities = 179/222 (80%), Positives = 196/222 (88%) Frame = +1 Query: 85 RPVTLSXXXXXXXXXXEAIVSSIKKALEDYSSVYVFTFENMRNQRFKEFREQMKSNSRFF 264 + VTLS E IVSSIK+ALED+ S YVFTFENMRNQ+FKEFREQ+KSNSRFF Sbjct: 41 KAVTLSKTKKKGRQHKEVIVSSIKQALEDHGSAYVFTFENMRNQKFKEFREQLKSNSRFF 100 Query: 265 LGANKVMQFSLGRSAADEGKPGIHKLSKFIQGDSGLFFTNLGRDEVQRLFEGYEEHDFAR 444 LG+NKVMQ SLGRS ADE KPGIHKLSKF++GD+GL FTNL ++EVQR FE YE+HDFAR Sbjct: 101 LGSNKVMQISLGRSVADETKPGIHKLSKFLRGDAGLLFTNLEKEEVQRTFEKYEDHDFAR 160 Query: 445 TGALATETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVIELVSDFVVCEEGKPLSPES 624 TG+ ATE VELKEGPLEQFTHEMEPFLRKQG+PVRL KGV+ELVSDFVVCEEGKPLSPES Sbjct: 161 TGSNATEKVELKEGPLEQFTHEMEPFLRKQGMPVRLTKGVVELVSDFVVCEEGKPLSPES 220 Query: 625 ARTLRLLGVKMATFRLHLVCRWSPDDFEVYREGLDLSDIESS 750 AR LRLLG+KMA FRLHLVCRW+PDDFEVYREGLDLSDIESS Sbjct: 221 ARILRLLGIKMAPFRLHLVCRWTPDDFEVYREGLDLSDIESS 262 >ref|XP_002276595.1| PREDICTED: mRNA turnover protein 4 homolog [Vitis vinifera] gi|298204604|emb|CBI23879.3| unnamed protein product [Vitis vinifera] Length = 229 Score = 355 bits (910), Expect = 1e-95 Identities = 170/229 (74%), Positives = 202/229 (88%) Frame = +1 Query: 64 MPKSKRDRPVTLSXXXXXXXXXXEAIVSSIKKALEDYSSVYVFTFENMRNQRFKEFREQM 243 MPKSKRDRPVTLS E+IV+SI++A+E+YSS+YVF+FENMRN +FKEFRE++ Sbjct: 1 MPKSKRDRPVTLSKTKKKGRGHKESIVNSIRQAVENYSSIYVFSFENMRNLKFKEFREKL 60 Query: 244 KSNSRFFLGANKVMQFSLGRSAADEGKPGIHKLSKFIQGDSGLFFTNLGRDEVQRLFEGY 423 KS SRFFLG+NKVMQ ++GRS ADE +PG+ K+SK + GD+GLFFTNL ++EVQRLF Y Sbjct: 61 KSTSRFFLGSNKVMQIAIGRSVADEIRPGLRKVSKLLHGDTGLFFTNLPKEEVQRLFNEY 120 Query: 424 EEHDFARTGALATETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVIELVSDFVVCEEG 603 EE+DFARTG+ A E VELKEGPL+QFTHEMEPFLRKQG+PVRLNKGV+ELVSDFVVCEEG Sbjct: 121 EEYDFARTGSTAVEKVELKEGPLDQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEG 180 Query: 604 KPLSPESARTLRLLGVKMATFRLHLVCRWSPDDFEVYREGLDLSDIESS 750 PLSPESAR LRLLG+KMATFRLHLVCRWSPD+F++Y+EGLD SD+ESS Sbjct: 181 TPLSPESARILRLLGIKMATFRLHLVCRWSPDEFDLYKEGLDDSDVESS 229 >ref|XP_002317075.1| predicted protein [Populus trichocarpa] gi|222860140|gb|EEE97687.1| predicted protein [Populus trichocarpa] Length = 229 Score = 353 bits (907), Expect = 3e-95 Identities = 173/229 (75%), Positives = 199/229 (86%) Frame = +1 Query: 64 MPKSKRDRPVTLSXXXXXXXXXXEAIVSSIKKALEDYSSVYVFTFENMRNQRFKEFREQM 243 MPKSKR+RPVTLS E+IV+SI+ A+E Y+S+YVF+FENMRN +FKEFREQ Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60 Query: 244 KSNSRFFLGANKVMQFSLGRSAADEGKPGIHKLSKFIQGDSGLFFTNLGRDEVQRLFEGY 423 K SRFFLG+NKVMQ SLGRSAADE +PG+HK+SK + GDSGLF TNL R+EV+RLF Y Sbjct: 61 KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDSGLFLTNLSREEVERLFNEY 120 Query: 424 EEHDFARTGALATETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVIELVSDFVVCEEG 603 EE+DFARTG ATE VELKEGPLEQFTHEMEPFLRKQG+PVRLNKGVI+LVS+FVVCEEG Sbjct: 121 EEYDFARTGTTATEMVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIDLVSNFVVCEEG 180 Query: 604 KPLSPESARTLRLLGVKMATFRLHLVCRWSPDDFEVYREGLDLSDIESS 750 KPLSPES+R LRLLG KMATFRLHL+CRWSP+DFE+YREGLD SD+ES+ Sbjct: 181 KPLSPESSRILRLLGTKMATFRLHLICRWSPEDFELYREGLDESDVESA 229 >ref|XP_002299012.1| predicted protein [Populus trichocarpa] gi|118486150|gb|ABK94918.1| unknown [Populus trichocarpa] gi|222846270|gb|EEE83817.1| predicted protein [Populus trichocarpa] Length = 229 Score = 348 bits (894), Expect = 1e-93 Identities = 172/229 (75%), Positives = 197/229 (86%) Frame = +1 Query: 64 MPKSKRDRPVTLSXXXXXXXXXXEAIVSSIKKALEDYSSVYVFTFENMRNQRFKEFREQM 243 MPKSKR+RPVTLS E+IV+SI+ A+E Y+S+YVF+FENMRN +FKEFREQ Sbjct: 1 MPKSKRNRPVTLSKTKKKGREHKESIVNSIRDAVEKYNSIYVFSFENMRNLKFKEFREQH 60 Query: 244 KSNSRFFLGANKVMQFSLGRSAADEGKPGIHKLSKFIQGDSGLFFTNLGRDEVQRLFEGY 423 K SRFFLG+NKVMQ SLGRSAADE +PG+HK+SK + GD+GLF TNL R+EV+RLF Y Sbjct: 61 KLTSRFFLGSNKVMQVSLGRSAADEIRPGLHKVSKLLCGDAGLFLTNLPREEVERLFNEY 120 Query: 424 EEHDFARTGALATETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVIELVSDFVVCEEG 603 EE+DFARTG ATETVELKEGPLEQFTHEMEPFLRKQG+PVRLNKGVIELVSDFVV EEG Sbjct: 121 EEYDFARTGTTATETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVIELVSDFVVSEEG 180 Query: 604 KPLSPESARTLRLLGVKMATFRLHLVCRWSPDDFEVYREGLDLSDIESS 750 KPLSPE AR LRLLG K ATF+LHL+CRWSP+DFE+YREGLD SD+ES+ Sbjct: 181 KPLSPECARILRLLGTKTATFKLHLICRWSPEDFELYREGLDDSDVESA 229 >gb|ABA40425.1| unknown [Solanum tuberosum] gi|413968558|gb|AFW90616.1| putative ribosomal protein L1 [Solanum tuberosum] Length = 229 Score = 348 bits (892), Expect = 2e-93 Identities = 168/229 (73%), Positives = 198/229 (86%) Frame = +1 Query: 64 MPKSKRDRPVTLSXXXXXXXXXXEAIVSSIKKALEDYSSVYVFTFENMRNQRFKEFREQM 243 MPKSKR+R VTLS E IV+SI++ E YSS YVF+FENMRN +FKEFR+Q+ Sbjct: 1 MPKSKRNRAVTLSKTKKKGKEHKENIVNSIRECAEKYSSAYVFSFENMRNLKFKEFRDQL 60 Query: 244 KSNSRFFLGANKVMQFSLGRSAADEGKPGIHKLSKFIQGDSGLFFTNLGRDEVQRLFEGY 423 KS+SRFFLG+NKVMQ +LGRS +DE +PG+HK+SK ++GDSGL FTNL ++EVQRLF Y Sbjct: 61 KSSSRFFLGSNKVMQVALGRSDSDEIRPGLHKISKLVRGDSGLCFTNLSKEEVQRLFNEY 120 Query: 424 EEHDFARTGALATETVELKEGPLEQFTHEMEPFLRKQGLPVRLNKGVIELVSDFVVCEEG 603 EEHDFARTG ATE VEL+EGPL+QFTHEMEPFLRKQG+PVRLN+GV+ELVSDFVVCEEG Sbjct: 121 EEHDFARTGTTATEKVELQEGPLDQFTHEMEPFLRKQGMPVRLNRGVVELVSDFVVCEEG 180 Query: 604 KPLSPESARTLRLLGVKMATFRLHLVCRWSPDDFEVYREGLDLSDIESS 750 +PLSPE+AR LRLLG KMATFRLHL+CRWSPD+FE+YREGL+ SDIESS Sbjct: 181 RPLSPEAARILRLLGKKMATFRLHLICRWSPDEFEIYREGLEESDIESS 229