BLASTX nr result

ID: Dioscorea21_contig00004720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004720
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] g...   425   e-117
gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indi...   425   e-117
gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indi...   423   e-116
ref|XP_002463182.1| hypothetical protein SORBIDRAFT_02g039270 [S...   422   e-116
gb|AFC88836.1| 40S ribosomal protein SA-like protein, partial [M...   421   e-115

>ref|NP_001060277.1| Os07g0616600 [Oryza sativa Japonica Group] gi|313103629|pdb|3IZ6|A
           Chain A, Localization Of The Small Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-Em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|33146943|dbj|BAC79991.1|
           putative 40S ribosomal protein [Oryza sativa Japonica
           Group] gi|113611813|dbj|BAF22191.1| Os07g0616600 [Oryza
           sativa Japonica Group] gi|125601085|gb|EAZ40661.1|
           hypothetical protein OsJ_25132 [Oryza sativa Japonica
           Group] gi|215678910|dbj|BAG96340.1| unnamed protein
           product [Oryza sativa Japonica Group]
           gi|215734975|dbj|BAG95697.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740977|dbj|BAG97472.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215764959|dbj|BAG86656.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 305

 Score =  425 bits (1093), Expect = e-117
 Identities = 206/229 (89%), Positives = 216/229 (94%)
 Frame = +1

Query: 88  EQDIQMMLAANVHLGTKNCDFQMERYVFKRRSDGIFIVNLGKTWEKLQLAARVIVAIENP 267
           EQDIQMMLAA+VHLGTKNCDFQMERYV+KRR+DGI+I+NLGKTWEKLQLAARVIVAIENP
Sbjct: 16  EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVAIENP 75

Query: 268 QDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 447
           QDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH
Sbjct: 76  QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 135

Query: 448 QPIKESSLGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAP 627
           QPIKES+LGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMVLQMRGTI P
Sbjct: 136 QPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILP 195

Query: 628 GHRWDVMVDLFFYRDPEETKDQGEEEAPVTAPDYGAAAEYTAMIPSDQW 774
           GH+WDVMVDLFFYRDPEE K+Q EEEA + APDYGA AEY A   +D W
Sbjct: 196 GHKWDVMVDLFFYRDPEEAKEQEEEEAALVAPDYGAVAEYAAP-AADTW 243


>gb|EAZ04711.1| hypothetical protein OsI_26872 [Oryza sativa Indica Group]
          Length = 305

 Score =  425 bits (1093), Expect = e-117
 Identities = 206/229 (89%), Positives = 216/229 (94%)
 Frame = +1

Query: 88  EQDIQMMLAANVHLGTKNCDFQMERYVFKRRSDGIFIVNLGKTWEKLQLAARVIVAIENP 267
           EQDIQMMLAA+VHLGTKNCDFQMERYV+KRR+DGI+I+NLGKTWEKLQLAARVIVAIENP
Sbjct: 16  EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVAIENP 75

Query: 268 QDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 447
           QDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH
Sbjct: 76  QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 135

Query: 448 QPIKESSLGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAP 627
           QPIKES+LGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMVLQMRGTI P
Sbjct: 136 QPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILP 195

Query: 628 GHRWDVMVDLFFYRDPEETKDQGEEEAPVTAPDYGAAAEYTAMIPSDQW 774
           GH+WDVMVDLFFYRDPEE K+Q EEEA + APDYGA AEY A   +D W
Sbjct: 196 GHKWDVMVDLFFYRDPEEAKEQEEEEAALVAPDYGAVAEYAAP-AADTW 243


>gb|EAY90376.1| hypothetical protein OsI_11954 [Oryza sativa Indica Group]
          Length = 310

 Score =  423 bits (1087), Expect = e-116
 Identities = 220/302 (72%), Positives = 230/302 (76%), Gaps = 4/302 (1%)
 Frame = +1

Query: 88  EQDIQMMLAANVHLGTKNCDFQMERYVFKRRSDGIFIVNLGKTWEKLQLAARVIVAIENP 267
           EQDIQMMLAA+VHLGTKNCDFQMERYV+KRRSDGIFI+NLGKTWEKLQLAARVIVAIENP
Sbjct: 18  EQDIQMMLAADVHLGTKNCDFQMERYVYKRRSDGIFIINLGKTWEKLQLAARVIVAIENP 77

Query: 268 QDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 447
           QDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH
Sbjct: 78  QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 137

Query: 448 QPIKESSLGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAP 627
           QPIKES+LGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMVLQMRGTI P
Sbjct: 138 QPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILP 197

Query: 628 GHRWDVMVDLFFYRDPEETKDQGEEEAPVTAPDYGAAAEYTAMIPSDQWPTXXXXXXXXX 807
           GH+WDVMVDLFFYRDPEE K+Q EEEA V  P+Y A AEY A  P+D W           
Sbjct: 198 GHKWDVMVDLFFYRDPEEAKEQEEEEAAV-GPEYAAVAEYGA-APTDNW-----GDQQWG 250

Query: 808 XXXXXXXXXXXXXXXXXXXTQGVVSDGWD----XXXXXXXXXXXXXXSWESAQAPAPTPT 975
                                 V ++GWD                   WE   APA  PT
Sbjct: 251 GEVQPPALPAAPTGEWGAAPAPVAAEGWDAVAVPPAAAAAVAPPAAPGWEEGSAPA--PT 308

Query: 976 GW 981
           GW
Sbjct: 309 GW 310


>ref|XP_002463182.1| hypothetical protein SORBIDRAFT_02g039270 [Sorghum bicolor]
           gi|241926559|gb|EER99703.1| hypothetical protein
           SORBIDRAFT_02g039270 [Sorghum bicolor]
          Length = 306

 Score =  422 bits (1084), Expect = e-116
 Identities = 204/222 (91%), Positives = 214/222 (96%)
 Frame = +1

Query: 88  EQDIQMMLAANVHLGTKNCDFQMERYVFKRRSDGIFIVNLGKTWEKLQLAARVIVAIENP 267
           EQDIQMMLAA+VHLGTKNCDFQMERYV+KRR+DGI+I+NLGKTWEKLQLAARVIVAIENP
Sbjct: 17  EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVAIENP 76

Query: 268 QDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 447
           QDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH
Sbjct: 77  QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 136

Query: 448 QPIKESSLGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAP 627
           QPIKES+LGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMVLQMRGTI P
Sbjct: 137 QPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTILP 196

Query: 628 GHRWDVMVDLFFYRDPEETKDQGEEEAPVTAPDYGAAAEYTA 753
           GH+WD+MVDLFFYRDPEE K+Q EEEA + APDYGA AEYTA
Sbjct: 197 GHKWDIMVDLFFYRDPEEAKEQEEEEA-LVAPDYGAVAEYTA 237


>gb|AFC88836.1| 40S ribosomal protein SA-like protein, partial [Miscanthus
           sinensis]
          Length = 281

 Score =  421 bits (1081), Expect = e-115
 Identities = 205/229 (89%), Positives = 216/229 (94%)
 Frame = +1

Query: 88  EQDIQMMLAANVHLGTKNCDFQMERYVFKRRSDGIFIVNLGKTWEKLQLAARVIVAIENP 267
           EQDIQMMLAA+VHLGTKNCDFQMERYV+KRR+DGI+I+NLGKTWEKLQLAARVIVAIENP
Sbjct: 7   EQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVAIENP 66

Query: 268 QDIIVQSARPYGQRAVLKFAQYTGAHPIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 447
           QDIIVQSARPYGQRAVLKFAQYTGAH IAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH
Sbjct: 67  QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 126

Query: 448 QPIKESSLGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIAP 627
           QPIKES+LGNIPTIAFCDTDSPMRYVDIGIPANNKGK SIGCLFWLLARMVLQMRGTI P
Sbjct: 127 QPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRGTIIP 186

Query: 628 GHRWDVMVDLFFYRDPEETKDQGEEEAPVTAPDYGAAAEYTAMIPSDQW 774
           GH+WD+MVDLFFYRDPEE K+Q EEEA + APDYGA AEY A   +D W
Sbjct: 187 GHKWDIMVDLFFYRDPEEAKEQEEEEA-LVAPDYGAVAEYAAP-GADNW 233


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