BLASTX nr result

ID: Dioscorea21_contig00004717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004717
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002458807.1| hypothetical protein SORBIDRAFT_03g040670 [S...    92   6e-17
dbj|BAJ94035.1| predicted protein [Hordeum vulgare subsp. vulgare]     89   4e-16
ref|XP_003567292.1| PREDICTED: uncharacterized protein LOC100834...    85   5e-15
ref|NP_001151279.1| transposon protein Mutator sub-class [Zea ma...    85   5e-15
gb|AFW84477.1| transposon protein Mutator sub-class [Zea mays]         85   7e-15

>ref|XP_002458807.1| hypothetical protein SORBIDRAFT_03g040670 [Sorghum bicolor]
           gi|241930782|gb|EES03927.1| hypothetical protein
           SORBIDRAFT_03g040670 [Sorghum bicolor]
          Length = 470

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 55/122 (45%), Positives = 72/122 (59%), Gaps = 7/122 (5%)
 Frame = +1

Query: 4   AAITDLLNSHPLLRARLTRTNPNEPFFISIPPLSDPIIETLSLSPVLP-------FLSAL 162
           AA+  L N+HP+LRARL RT+P+ P      P +      L L+P LP       F + L
Sbjct: 55  AALHSLRNAHPVLRARL-RTSPSGPTLAFPDPAAPAPSPPLPLAP-LPAPDSAPDFHALL 112

Query: 163 DLELNRNPWADTPEPNQIPVFFATIYENQPDPGPSLIVFRFHTTVCDRTAAVAILKELMA 342
           + ELNRNPWAD    +  PV FAT+YE  P  G + +  R HT  CDR+AA A+ +EL+A
Sbjct: 113 EHELNRNPWADPASSDDAPVLFATLYELPPATGGAALFVRIHTVACDRSAANALARELVA 172

Query: 343 LL 348
           LL
Sbjct: 173 LL 174


>dbj|BAJ94035.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 478

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
 Frame = +1

Query: 4   AAITDLLNSHPLLRARLTRTNPNEPFFISIPPLSDPIIETLSLSPVLPFLSALDLELNRN 183
           AA+  L N+HP+LRA L R  P+ P      P S P +       VL F S L+ E+NRN
Sbjct: 74  AAVRALQNAHPVLRAHL-RGTPSSPTLAF--PSSAPQLSLAPQPSVLDFHSLLEREINRN 130

Query: 184 PWADT-PEPNQIPVFFATIYENQPDPGPSLIVFRFHTTVCDRTAAVAILKELMALL 348
           PWA   PEP+  PV FA +Y+  P  G + +    HT VCDR A+ A+L EL+ALL
Sbjct: 131 PWAAAAPEPDGAPVLFAALYQLPPPAGGAALFILIHTAVCDRAASEALLSELLALL 186


>ref|XP_003567292.1| PREDICTED: uncharacterized protein LOC100834188 [Brachypodium
           distachyon]
          Length = 469

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
 Frame = +1

Query: 4   AAITDLLNSHPLLRARLTRTNPNEPFFISIPPLSDPIIETLS----LSPVLPFLSALDLE 171
           AA+  L  +HP+LRA L  +       ++ P  S P+  +L+      P L F S L+ E
Sbjct: 54  AAVRSLQKAHPILRAHLRASPSGGAATLAFPASSSPLQLSLAPQPASEPALDFHSLLERE 113

Query: 172 LNRNPWADT--PEPNQIPVFFATIYENQPDPGPSLIVFRFHTTVCDRTAAVAILKELMAL 345
           LNRNPWA    P+    PV FA +YE  P  G   ++ R HT  CDR A+ A+ +EL+AL
Sbjct: 114 LNRNPWASASGPDAAAAPVLFAALYELPPPAGGVALLVRIHTVACDRAASAALARELIAL 173

Query: 346 L 348
           L
Sbjct: 174 L 174


>ref|NP_001151279.1| transposon protein Mutator sub-class [Zea mays]
           gi|195645492|gb|ACG42214.1| transposon protein Mutator
           sub-class [Zea mays]
          Length = 465

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
 Frame = +1

Query: 4   AAITDLLNSHPLLRARLTRTNPNEPFFISIPPLSDPIIETLSLSPVLP-FLSALDLELNR 180
           AA+  L ++HP+LRARL  ++P+ P      P    ++  +      P F + L+ ELNR
Sbjct: 55  AALRSLRDAHPVLRARLRTSSPSGPTLAFPDPAPPFLLAPIPAPGSAPDFHALLEHELNR 114

Query: 181 NPWADTP-EPNQIPVFFATIYENQPDPGPSLIVFRFHTTVCDRTAAVAILKELMALL 348
           NPWAD P   +  PV FAT+YE     G + +  R HT  CDR+AA A+ +EL+ALL
Sbjct: 115 NPWADDPASSDDAPVLFATLYELPAATGGAALFVRIHTVACDRSAASALARELVALL 171


>gb|AFW84477.1| transposon protein Mutator sub-class [Zea mays]
          Length = 465

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
 Frame = +1

Query: 4   AAITDLLNSHPLLRARLTRTNPNEP---FFISIPPLSDPIIETLSLSPVLPFLSALDLEL 174
           AA+  L ++HP+LRARL  ++P+ P   F    PP   P+    +      F + L+ EL
Sbjct: 55  AALRSLRDAHPVLRARLRTSSPSGPTLAFPDPAPPF--PLAPLPAPGSAPDFHALLEHEL 112

Query: 175 NRNPWADTP-EPNQIPVFFATIYENQPDPGPSLIVFRFHTTVCDRTAAVAILKELMALL 348
           NRNPWAD P   +  PV FAT+YE     G + +  R HT  CDR+AA A+ +EL+ALL
Sbjct: 113 NRNPWADDPASSDDAPVLFATLYELPAATGDAALFVRIHTVACDRSAASALARELVALL 171


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