BLASTX nr result

ID: Dioscorea21_contig00004700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004700
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318705.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002877614.1| hypothetical protein ARALYDRAFT_485209 [Arab...    55   5e-06
ref|NP_566907.1| uncharacterized protein [Arabidopsis thaliana] ...    55   5e-06
ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_003608867.1| hypothetical protein MTR_4g103840 [Medicago ...    55   6e-06

>ref|XP_002318705.1| predicted protein [Populus trichocarpa] gi|222859378|gb|EEE96925.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 36/80 (45%), Positives = 45/80 (56%), Gaps = 11/80 (13%)
 Frame = +1

Query: 31  MERRGGCCIVRY---GAEPDVAWKMDRIMLRFRPIAPKP-------TVDGGXXXXXXXXX 180
           M+ RGGCCI RY   G E  ++ K+DRIMLRFRPIAPKP       +V GG         
Sbjct: 1   MDSRGGCCIARYSSVGGENGMS-KVDRIMLRFRPIAPKPATATSGSSVSGGGSSPEMSDV 59

Query: 181 XXKTSR-KRRGNPTSTGVTA 237
             ++ R KR+ N TS G  +
Sbjct: 60  SPRSGRGKRKYNNTSKGTNS 79


>ref|XP_002877614.1| hypothetical protein ARALYDRAFT_485209 [Arabidopsis lyrata subsp.
           lyrata] gi|297323452|gb|EFH53873.1| hypothetical protein
           ARALYDRAFT_485209 [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
 Frame = +1

Query: 31  MERRGGCCIVRY--GAEPDVAWKMDRIMLRFRPIAPKPTVDGG 153
           M+ RGGCCI RY  G+ P    K DRIMLRFRPIAPKP   GG
Sbjct: 1   MDGRGGCCIARYAIGSGPYDLSKADRIMLRFRPIAPKPASPGG 43


>ref|NP_566907.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6523082|emb|CAB62340.1| hypothetical protein
           [Arabidopsis thaliana] gi|108385250|gb|ABF85766.1|
           At3g48510 [Arabidopsis thaliana]
           gi|110738541|dbj|BAF01196.1| hypothetical protein
           [Arabidopsis thaliana] gi|332644904|gb|AEE78425.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 294

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 28/43 (65%), Positives = 30/43 (69%), Gaps = 2/43 (4%)
 Frame = +1

Query: 31  MERRGGCCIVRY--GAEPDVAWKMDRIMLRFRPIAPKPTVDGG 153
           M+ RGGCCI RY  G+ P    K DRIMLRFRPIAPKP   GG
Sbjct: 1   MDGRGGCCIARYAIGSGPYDLSKADRIMLRFRPIAPKPASPGG 43


>ref|XP_002322230.1| predicted protein [Populus trichocarpa] gi|222869226|gb|EEF06357.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 36/78 (46%), Positives = 44/78 (56%), Gaps = 12/78 (15%)
 Frame = +1

Query: 31  MERRGGCCIVRY---GAEPDVAWKMDRIMLRFRPIAPKPT--------VDGGXXXXXXXX 177
           M+ RGGCCI RY   G   D++ K+DRIMLRFRPIAPKP+        V GG        
Sbjct: 1   MDGRGGCCIARYAGGGGAYDMS-KVDRIMLRFRPIAPKPSTAPSSAAFVSGGGSSPEMSD 59

Query: 178 XXXKTSR-KRRGNPTSTG 228
              ++ R KR+ N TS G
Sbjct: 60  ASPRSGRGKRKYNNTSNG 77


>ref|XP_003608867.1| hypothetical protein MTR_4g103840 [Medicago truncatula]
           gi|355509922|gb|AES91064.1| hypothetical protein
           MTR_4g103840 [Medicago truncatula]
          Length = 266

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/65 (52%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
 Frame = +1

Query: 31  MERRGGCCIVRYGAEPDVAWKMDRIMLRFRPIAPKPTVDG------GXXXXXXXXXXXKT 192
           M+ RGGCCIVR GA  D++  M++IMLRFRPIAPKP V G      G           KT
Sbjct: 1   MDGRGGCCIVRNGAH-DMS-TMEKIMLRFRPIAPKPVVPGATTASDGTSSSDSGDAFFKT 58

Query: 193 SRKRR 207
           SR RR
Sbjct: 59  SRTRR 63


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