BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004638
         (1223 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an...   536   e-150
ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420 [S...   536   e-150
ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea ma...   525   e-146
ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japonica Group] g...   523   e-146
ref|XP_003562359.1| PREDICTED: DNA-directed RNA polymerases I an...   521   e-145

>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
            [Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
            protein product [Vitis vinifera]
          Length = 372

 Score =  536 bits (1382), Expect = e-150
 Identities = 264/372 (70%), Positives = 315/372 (84%), Gaps = 5/372 (1%)
 Frame = +3

Query: 3    MPKVSALDMPDVPKGKLPEHLEVQRTRVVCNADAPIYTEPFHYSGAFALMGVDNSVTLES 182
            M +  ALDMPDVPKG+LP H+E+QRTRV+CN DAP +TE   YSGA++ MGVDNS+ ++ 
Sbjct: 1    MHRSPALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQ 60

Query: 183  FCKNLKIEVIELTEDTMEFDMIGIDASLANAFRRILIAEVPTMAIENVLMVNNTSVIPDE 362
            FC N ++EVI L+ED MEFDMIGID S+ANAFRRILIAE+PTMAIE VL+ NNTS++ DE
Sbjct: 61   FCNNFRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDE 120

Query: 363  VLAHRLGLIPLNADPKLFEYLSEHDTPNERNTIVFKLAVSCKKGSPRLTVKSDQLKWLPG 542
            VLAHRLGLIP+NADP+LF+ LSE+DTPNE+NTIVF L V C++G PRLTVKS++LKWLP 
Sbjct: 121  VLAHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPH 180

Query: 543  GSE--LEMESPTPS--AKPRTYTSFSRSQDSMPEFANKPLGVKHQDIIIDKLGPGQAIEL 710
            GSE  L  E+ T S  +KP+TYTSFS SQDS+PEF++K +G KH DIII KLGPGQ IEL
Sbjct: 181  GSEFPLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIEL 240

Query: 711  EAHAVKGIGKVHAKWSPVATAWYRMLPEVILLKEIKGVDAEKLVKKCPVNVFDIEDVGKG 890
            EAHAVKG+GK HAKWSPVATAWYRMLPEV+LL+EI+   AE+LVKKCPVNVFDIED+ KG
Sbjct: 241  EAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKG 300

Query: 891  EKKAVVANPRACTLCRECIRGVN-EPQVELRRAKDHFIFKIESAGAIPPEVLFTDAVKIL 1067
            +KKA VA PRACTLCRECIRG + +  V +RR K+HFIF IES GA+PPEVLF +AVK+L
Sbjct: 301  KKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVL 360

Query: 1068 EEKCDRVICELS 1103
            E+KC+RVI ELS
Sbjct: 361  EDKCERVITELS 372


>ref|XP_002453469.1| hypothetical protein SORBIDRAFT_04g006420 [Sorghum bicolor]
            gi|241933300|gb|EES06445.1| hypothetical protein
            SORBIDRAFT_04g006420 [Sorghum bicolor]
          Length = 370

 Score =  536 bits (1381), Expect = e-150
 Identities = 264/359 (73%), Positives = 308/359 (85%), Gaps = 1/359 (0%)
 Frame = +3

Query: 30   PDVPKGKLPEHLEVQRTRVVCNADAPIYTEPFHYSGAFALMGVDNSVTLESFCKNLKIEV 209
            P+  + KLP++LEVQRTRVVCNADAPI+T+ + YSG FA MGVDNSV++E FCKN KIE+
Sbjct: 15   PNQQENKLPDYLEVQRTRVVCNADAPIHTQGYQYSGTFAAMGVDNSVSVEKFCKNFKIEI 74

Query: 210  IELTEDTMEFDMIGIDASLANAFRRILIAEVPTMAIENVLMVNNTSVIPDEVLAHRLGLI 389
              LTED MEFDMIGIDAS+ANAFRRILIAEVPTMAIE + MV+NTSVI DEVL+HRLGLI
Sbjct: 75   NRLTEDDMEFDMIGIDASIANAFRRILIAEVPTMAIEKIFMVDNTSVIADEVLSHRLGLI 134

Query: 390  PLNADPKLFEYLSEHDTPNERNTIVFKLAVSCKKGSPRLTVKSDQLKWLPGGSELEMESP 569
            PL ADP+LF+Y+SE+D PNERNT+V+KL VSC KGS R+TVKS +L+WLP GS+L M +P
Sbjct: 135  PLRADPRLFDYISENDVPNERNTVVYKLHVSCPKGSQRITVKSSELEWLPEGSQLSMAAP 194

Query: 570  TPSA-KPRTYTSFSRSQDSMPEFANKPLGVKHQDIIIDKLGPGQAIELEAHAVKGIGKVH 746
              S  K +T+TSFS+SQ    E   +PLGVK +DI I +LGPGQAIELEAHAVKG+GKVH
Sbjct: 195  AQSGDKQKTFTSFSQSQ---KEILEEPLGVKFKDITIARLGPGQAIELEAHAVKGVGKVH 251

Query: 747  AKWSPVATAWYRMLPEVILLKEIKGVDAEKLVKKCPVNVFDIEDVGKGEKKAVVANPRAC 926
            AKWSPVATAWYRMLPEV++LK+I+G DAE+LVKKCPVNVFDIED+G G K+AVVA PRAC
Sbjct: 252  AKWSPVATAWYRMLPEVVILKDIEGDDAEELVKKCPVNVFDIEDLGNGGKRAVVAKPRAC 311

Query: 927  TLCRECIRGVNEPQVELRRAKDHFIFKIESAGAIPPEVLFTDAVKILEEKCDRVICELS 1103
            TLCREC+ G N  QVELRR +DHFIF IES GA+PPEVLFT+AVKILEEKC+RVI ELS
Sbjct: 312  TLCRECVMGPNGNQVELRRVRDHFIFTIESTGALPPEVLFTEAVKILEEKCERVISELS 370


>ref|NP_001130839.1| uncharacterized protein LOC100191943 [Zea mays]
            gi|194690246|gb|ACF79207.1| unknown [Zea mays]
            gi|413926820|gb|AFW66752.1| hypothetical protein
            ZEAMMB73_992882 [Zea mays]
          Length = 372

 Score =  525 bits (1351), Expect = e-146
 Identities = 259/361 (71%), Positives = 304/361 (84%), Gaps = 1/361 (0%)
 Frame = +3

Query: 24   DMPDVPKGKLPEHLEVQRTRVVCNADAPIYTEPFHYSGAFALMGVDNSVTLESFCKNLKI 203
            D+P+  + KLP++LE+QRTRVVCNADAPI+T+ F YSGAFA MG+DNSV+++ FCKN KI
Sbjct: 15   DVPNEQENKLPDYLELQRTRVVCNADAPIHTQGFQYSGAFAAMGIDNSVSVDKFCKNFKI 74

Query: 204  EVIELTEDTMEFDMIGIDASLANAFRRILIAEVPTMAIENVLMVNNTSVIPDEVLAHRLG 383
            E+  LTED MEFDMIGIDAS+ANAFRRILI+EVPTMAIE V M +N SVI DEVL+HRLG
Sbjct: 75   EINRLTEDYMEFDMIGIDASIANAFRRILISEVPTMAIEKVFMADNNSVIADEVLSHRLG 134

Query: 384  LIPLNADPKLFEYLSEHDTPNERNTIVFKLAVSCKKGSPRLTVKSDQLKWLPGGSELEME 563
            LIPL+ADP+LFEY+SE+D PNERNTIV+KL VSC K S R+TVKS +L+WLP GS+L M 
Sbjct: 135  LIPLDADPRLFEYISENDVPNERNTIVYKLHVSCPKNSQRITVKSSELEWLPEGSQLSMS 194

Query: 564  SPTPSA-KPRTYTSFSRSQDSMPEFANKPLGVKHQDIIIDKLGPGQAIELEAHAVKGIGK 740
            +P  S  K +T+TSFS+SQ    E   KPLGVK++DI I +LGPGQAIELEAHAVKG G 
Sbjct: 195  APAQSGDKQKTFTSFSQSQ---KEILEKPLGVKYKDITIARLGPGQAIELEAHAVKGTGN 251

Query: 741  VHAKWSPVATAWYRMLPEVILLKEIKGVDAEKLVKKCPVNVFDIEDVGKGEKKAVVANPR 920
            VHAKWSPVATAWYRMLPEV++LKE++G  AE+LV KC VNVFDIED+  G K+AVVA PR
Sbjct: 252  VHAKWSPVATAWYRMLPEVVILKEVEGPQAEELVNKCRVNVFDIEDLANGGKRAVVARPR 311

Query: 921  ACTLCRECIRGVNEPQVELRRAKDHFIFKIESAGAIPPEVLFTDAVKILEEKCDRVICEL 1100
            ACTLCREC+ G NE QVELRR +DHFIF IES G++PPEVLFT+AVKILEEKC RVI EL
Sbjct: 312  ACTLCRECVMGPNEKQVELRRVRDHFIFTIESTGSMPPEVLFTEAVKILEEKCARVISEL 371

Query: 1101 S 1103
            S
Sbjct: 372  S 372


>ref|NP_001049823.1| Os03g0295400 [Oryza sativa Japonica Group]
            gi|108707636|gb|ABF95431.1| RNA polymerase Rpb3/Rpb11
            dimerisation domain containing protein, expressed [Oryza
            sativa Japonica Group] gi|113548294|dbj|BAF11737.1|
            Os03g0295400 [Oryza sativa Japonica Group]
            gi|222624742|gb|EEE58874.1| hypothetical protein
            OsJ_10475 [Oryza sativa Japonica Group]
          Length = 379

 Score =  523 bits (1347), Expect = e-146
 Identities = 267/362 (73%), Positives = 301/362 (83%), Gaps = 8/362 (2%)
 Frame = +3

Query: 42   KGKLPEHLEVQRTRVVCNADAPIYTEPFHYSGAFALMGVDNSVTLESFCKNLKIEVIELT 221
            K KLPEHLEVQRTRVVC  DAP+ TE F Y+GAFA MG+DNSV+ + FCKN K+ V  LT
Sbjct: 21   KNKLPEHLEVQRTRVVCKGDAPVNTEGFQYAGAFAAMGIDNSVSADKFCKNFKVVVNRLT 80

Query: 222  EDTMEFDMIGIDASLANAFRRILIAEVPTMAIENVLMVNNTSVIPDEVLAHRLGLIPLNA 401
            ED MEFDMIGIDAS+ANAFRRILIAEVPTMAIE VLM +NTSVI DEVL+HRLGLIPL+A
Sbjct: 81   EDDMEFDMIGIDASMANAFRRILIAEVPTMAIEKVLMADNTSVIADEVLSHRLGLIPLDA 140

Query: 402  DPKLFEYLSEHDTPNERNTIVFKLAVSCKKGSPRLTVKSDQLKWLPGGSELEMESPTPSA 581
            DP+LFEY+SE+D P ERNTIV+KL VSCKKGSPRLTVKS  L+WLP GS+L + SP  S 
Sbjct: 141  DPRLFEYISENDVPTERNTIVYKLHVSCKKGSPRLTVKSGDLEWLPEGSQLPLASPAQSG 200

Query: 582  -KPRTYTSFSRSQDSMPEFANKPLGVKHQDIIIDKLGPGQAIELEAHAVKGIGKVHAKWS 758
             K +TYTSFS+SQ  + E   KPLGVK +DI I +LGPGQAIELE HAVKGIGKVHAKWS
Sbjct: 201  DKQKTYTSFSQSQKDILE---KPLGVKFKDITIARLGPGQAIELEVHAVKGIGKVHAKWS 257

Query: 759  PVATAWYRMLPEVILLKEIKGVDAEKLVKKCPVNVFDIEDVGKGEKKAVVANPRACTLCR 938
            PVATAWYRMLPEV+L +EIK  DAE LV KCPVNVFDIED+G GEK+AVVA PRACTLCR
Sbjct: 258  PVATAWYRMLPEVVLREEIKDADAEMLVAKCPVNVFDIEDLGNGEKRAVVARPRACTLCR 317

Query: 939  ECIRG----VNEP---QVELRRAKDHFIFKIESAGAIPPEVLFTDAVKILEEKCDRVICE 1097
            +C+ G    V  P   QVELRR +DHFIF IES GA+PPE+LFT+AV+ILEEKC+RVI E
Sbjct: 318  QCVMGPTGEVMGPTVEQVELRRVRDHFIFTIESTGALPPEMLFTEAVRILEEKCERVISE 377

Query: 1098 LS 1103
            LS
Sbjct: 378  LS 379


>ref|XP_003562359.1| PREDICTED: DNA-directed RNA polymerases I and III subunit rpac1-like
            [Brachypodium distachyon]
          Length = 360

 Score =  521 bits (1342), Expect = e-145
 Identities = 261/364 (71%), Positives = 306/364 (84%), Gaps = 3/364 (0%)
 Frame = +3

Query: 21   LDMPDVP---KGKLPEHLEVQRTRVVCNADAPIYTEPFHYSGAFALMGVDNSVTLESFCK 191
            +DM DVP   + KLP+HLE QRTRV C ADAP +T+ F YSGAFA MGVDNSV++E FC 
Sbjct: 1    MDMDDVPTQQRNKLPDHLERQRTRVTCKADAPTHTQGFQYSGAFAAMGVDNSVSVEKFCN 60

Query: 192  NLKIEVIELTEDTMEFDMIGIDASLANAFRRILIAEVPTMAIENVLMVNNTSVIPDEVLA 371
            + KI++  LTED MEFDMIG+DAS+ANAFRRILIAEVPTMAIE V MV+NTSVI DEVL+
Sbjct: 61   SFKIKINRLTEDDMEFDMIGVDASIANAFRRILIAEVPTMAIEKVFMVDNTSVIADEVLS 120

Query: 372  HRLGLIPLNADPKLFEYLSEHDTPNERNTIVFKLAVSCKKGSPRLTVKSDQLKWLPGGSE 551
            HRLGLIPL+ADP+LF+++S+ D PNERNTIV+KL VSC+KGS RLTVKS QL+WLP GS+
Sbjct: 121  HRLGLIPLDADPRLFDHISD-DVPNERNTIVYKLHVSCEKGSQRLTVKSGQLEWLPEGSQ 179

Query: 552  LEMESPTPSAKPRTYTSFSRSQDSMPEFANKPLGVKHQDIIIDKLGPGQAIELEAHAVKG 731
            L M S     K +TYTSF +SQ ++   + + +GVK++DI I +LGPGQAIELEAHAVKG
Sbjct: 180  LLMASAAQGEKQKTYTSFGQSQKNI---SGRSIGVKYKDITIARLGPGQAIELEAHAVKG 236

Query: 732  IGKVHAKWSPVATAWYRMLPEVILLKEIKGVDAEKLVKKCPVNVFDIEDVGKGEKKAVVA 911
            +GKVHAKWSPVATAWYRMLPEV+LLKEIK  +AE+LVKKCPVNVFDIED+G G K+AVVA
Sbjct: 237  VGKVHAKWSPVATAWYRMLPEVVLLKEIKDGEAEELVKKCPVNVFDIEDLGNGAKRAVVA 296

Query: 912  NPRACTLCRECIRGVNEPQVELRRAKDHFIFKIESAGAIPPEVLFTDAVKILEEKCDRVI 1091
             PRACTLCREC+ G    QVELRR +DHFIF IES GA+PPEVLFT+AVKILEEKC+RVI
Sbjct: 297  RPRACTLCRECVMGPTGEQVELRRVRDHFIFTIESTGALPPEVLFTEAVKILEEKCERVI 356

Query: 1092 CELS 1103
             ELS
Sbjct: 357  SELS 360