BLASTX nr result

ID: Dioscorea21_contig00004567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004567
         (509 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265920.1| PREDICTED: transcriptional corepressor SEUSS...    93   3e-17
emb|CAF18249.1| SEU3A protein [Antirrhinum majus]                      91   1e-16
gb|AFW56365.1| hypothetical protein ZEAMMB73_253422 [Zea mays]         81   8e-14
ref|XP_002893967.1| hypothetical protein ARALYDRAFT_891365 [Arab...    81   8e-14
ref|XP_004164699.1| PREDICTED: transcriptional corepressor SEUSS...    80   1e-13

>ref|XP_002265920.1| PREDICTED: transcriptional corepressor SEUSS-like [Vitis vinifera]
          Length = 913

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 78/193 (40%), Positives = 97/193 (50%), Gaps = 25/193 (12%)
 Frame = +1

Query: 4   SVSSLLNHSFGNGSSGTLMN---LQQRVGVNGHANM-----IGSG---------EPDAQS 132
           SVSSLL+ SFGNG S   ++     QR G++  A       +G+G          P   +
Sbjct: 62  SVSSLLSQSFGNGGSNPGLSGPGSGQRGGIDAGAESDPLSGVGNGLGFTPPASFVPTNMA 121

Query: 133 FNSSAGQLQGQQHFQNHXXXXXXXXXXXXXXFEGAQNFQ------RQFS--LTHXXXXXX 288
              SAGQ  GQQ FQN                E AQNFQ      +QFS  L        
Sbjct: 122 NPGSAGQ--GQQ-FQNPSGNQMLPDQQQSQQLE-AQNFQHGQQPLQQFSAPLNTQQQQQY 177

Query: 289 XXXXXXXXXXXXXKLEPQMGSAEQHAPPQQLQSVHNIGAVKIEPQQLQSMRNLGPVKLEH 468
                        KLEPQ+ + +QH   QQLQS+ NIG VK+EPQQ+ +MR+L PVK+E 
Sbjct: 178 QSIRGGLGGVGPVKLEPQVTN-DQHGQQQQLQSLRNIGPVKLEPQQIPTMRSLAPVKMEP 236

Query: 469 QHSDPSVFLHQQQ 507
           QHSD S+FLHQQQ
Sbjct: 237 QHSDQSLFLHQQQ 249


>emb|CAF18249.1| SEU3A protein [Antirrhinum majus]
          Length = 901

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 69/197 (35%), Positives = 99/197 (50%), Gaps = 29/197 (14%)
 Frame = +1

Query: 4   SVSSLLNHSFGNGSSGTLMNL---QQRVGVNGHA---------NMIGSGEPDAQSFNSS- 144
           +VSSLL+  FGNG   + ++     QR  ++G A         N +G   P +   +SS 
Sbjct: 62  NVSSLLHQPFGNGGPNSGLSXPGSSQRGLIDGGAESDPLSSVGNGMGFNAPSSSYISSSI 121

Query: 145 ------AGQLQGQQHFQNHXXXXXXXXXXXXXXFEGAQNF---QRQFSLT-------HXX 276
                 +GQ+QGQQ F NH               + +QNF   Q+QF+++          
Sbjct: 122 TANQNSSGQVQGQQQFSNHSGSQMLTDQQHAQQLD-SQNFHHNQQQFTVSSNSQQQQQPQ 180

Query: 277 XXXXXXXXXXXXXXXXXKLEPQMGSAEQHAPPQQLQSVHNIGAVKIEPQQLQSMRNLGPV 456
                            KLE Q+ + +    PQQLQ++ N+G+VK+EPQQLQ+MR+L PV
Sbjct: 181 QQQYQAMRAGLGGVGPVKLEQQVTNEQV---PQQLQALRNLGSVKLEPQQLQNMRSLXPV 237

Query: 457 KLEHQHSDPSVFLHQQQ 507
           K+  QHSDPS+FL QQQ
Sbjct: 238 KMXPQHSDPSLFLQQQQ 254


>gb|AFW56365.1| hypothetical protein ZEAMMB73_253422 [Zea mays]
          Length = 902

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 20/188 (10%)
 Frame = +1

Query: 4   SVSSLLNH--SFGNGSSGTLMN---------LQQRVGVNGHANMIGSGEPDAQSFNSSAG 150
           SV+S+L+   S+GNG +G +           LQ R G++G  +++G+G PD+ +F+SS  
Sbjct: 80  SVASMLSRQQSYGNGGTGVMPGSGAGLPIGGLQHRGGLDGVGDLVGTGGPDSMAFSSSGP 139

Query: 151 QLQGQQHFQNHXXXXXXXXXXXXXXFEGAQNFQRQFSLTH---------XXXXXXXXXXX 303
              G Q                    +  Q  Q+Q S+T+                    
Sbjct: 140 GSLGNQ--LGVDSLQQQQQLDAPQDSQNQQEHQQQMSMTYNQQHMMSQTQQQQQPAVKLE 197

Query: 304 XXXXXXXXKLEPQMGSAEQHAPPQQLQSVHNIGAVKIEPQQLQSMRNLGPVKLEHQHSDP 483
                   KLE QMG  +Q    Q L+S  + G VK+EP QLQ++R+LG +K+EHQ SDP
Sbjct: 198 NGGVLGGVKLEQQMGQPDQSVSAQMLRS--SSGGVKLEP-QLQALRSLGAIKMEHQSSDP 254

Query: 484 SVFLHQQQ 507
           SV L QQQ
Sbjct: 255 SVLLQQQQ 262


>ref|XP_002893967.1| hypothetical protein ARALYDRAFT_891365 [Arabidopsis lyrata subsp.
           lyrata] gi|297339809|gb|EFH70226.1| hypothetical protein
           ARALYDRAFT_891365 [Arabidopsis lyrata subsp. lyrata]
          Length = 870

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 64/179 (35%), Positives = 90/179 (50%), Gaps = 11/179 (6%)
 Frame = +1

Query: 4   SVSSLLNH-SFGNGSSGTLMNLQQRVGVNGHANMIGSGEPDAQSFNSSA-------GQLQ 159
           ++SSLLN+ SF NG  G+++++      +   + +G       SFN+S+       GQLQ
Sbjct: 59  NISSLLNNQSFVNGIPGSMISMDTSGAESDPLSNVGFS--GLSSFNASSMVSPRSSGQLQ 116

Query: 160 GQQHFQNHXXXXXXXXXXXXXXFEGAQNFQRQFSLTHXXXXXXXXXXXXXXXXXXXKLEP 339
           GQQ F N                E  QNFQ     +                    K+EP
Sbjct: 117 GQQ-FSNVSSNQLLAEQQRNKKLE-PQNFQHGQQQSMQQQQFSTVRGGGLAGVGSVKMEP 174

Query: 340 -QMGSAEQHAPPQQLQS--VHNIGAVKIEPQQLQSMRNLGPVKLEHQHSDPSVFLHQQQ 507
            Q+ + +QH   QQ Q   + N+G+VK+EPQQLQ+MRNL  VK+E QHS+ S+FL QQQ
Sbjct: 175 GQVSNDQQHGQVQQQQQKMLRNLGSVKLEPQQLQAMRNLSQVKMEPQHSEQSLFLQQQQ 233


>ref|XP_004164699.1| PREDICTED: transcriptional corepressor SEUSS-like, partial [Cucumis
           sativus]
          Length = 398

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 71/203 (34%), Positives = 92/203 (45%), Gaps = 36/203 (17%)
 Frame = +1

Query: 4   SVSSLLNHSFGNG---SSGTLMNLQQRVGVNGHA-----NMIGSG--------------- 114
           S+SSLLN SF NG   S  + +   QRVG++  +     +++G+G               
Sbjct: 61  SMSSLLNQSFVNGVPNSGPSGLGNSQRVGMDAGSESDPFSLVGNGVNFNNTPSSLVTSNT 120

Query: 115 -EPDAQS-------FNSSAGQ-LQGQQHFQNHXXXXXXXXXXXXXXFEGAQNFQRQFSLT 267
             P + S        N S+GQ L  QQ  Q                F  + N Q+   L 
Sbjct: 121 ANPGSSSQVSVHQFSNHSSGQILPNQQQSQQIEPQNFQHSQHSMQQFATSNNTQQSQQLQ 180

Query: 268 HXXXXXXXXXXXXXXXXXXXKLEPQMGS----AEQHAPPQQLQSVHNIGAVKIEPQQLQS 435
                               KLEPQM +     +Q    QQLQS+ N+G VK+EPQQLQS
Sbjct: 181 QQQQHQFQRGSLCSAGPV--KLEPQMNNNDLQGQQLQQQQQLQSMRNLGPVKLEPQQLQS 238

Query: 436 MRNLGPVKLEHQHSDPSVFLHQQ 504
           MRN+GPVKLE Q SD S+FL QQ
Sbjct: 239 MRNMGPVKLEPQQSDQSLFLQQQ 261


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