BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004548
         (1614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ...   517   e-144
emb|CBI40014.3| unnamed protein product [Vitis vinifera]              508   e-141
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-...   508   e-141
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-...   504   e-140
ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|2...   494   e-137

>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
            gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
            rpoD1, putative [Ricinus communis]
          Length = 569

 Score =  517 bits (1332), Expect = e-144
 Identities = 280/451 (62%), Positives = 324/451 (71%), Gaps = 1/451 (0%)
 Frame = +1

Query: 1    EVAKDAAQIIGSNIVVTLEKTQGLPAXXXXXXXXXXXXXXXXXAAKVDHSSTFEEESNED 180
            +VAKDAA ++ +    + E    L +                 A  +  S   E    E+
Sbjct: 121  KVAKDAALLVKN--FPSAETESKLTSPSTIDASRWPQFTETERARIIGDSVATETGPREE 178

Query: 181  LSTQVMTK-SDLSDLTQTELEDNSLDLPEKIAVRSGRQSEXXXXXXXXXXXXXXXVLXXX 357
             S Q   K SD  +LT  ELE     L E IAVRS RQ+E               V+   
Sbjct: 179  SSMQSSIKESDYLELTHKELELLQKQLSEGIAVRSRRQTERKARRARAVEKAASSVVSVK 238

Query: 358  XXXXXXXXXPPVQDVDYTDPLRYLRGTTSISKLLTANEELELSKAIQXXXXXXXXXXXXX 537
                       +Q+VDY+DPLRYLRGTTS S+LLTA+EELELS AIQ             
Sbjct: 239  PGSTSKKKRGSLQEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELA 298

Query: 538  XRNGGQPTFAQWAAAAGIDQRTLRKRLSYGAVCKDKMIKSNIRLVISIAKNYQGAGMNLQ 717
             R GGQPTFAQWAAAAG+DQRTLRKR+++G +CKDKMIKSNIRLVISIAKNYQGAGMNLQ
Sbjct: 299  ERYGGQPTFAQWAAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQ 358

Query: 718  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 897
            DLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR
Sbjct: 359  DLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 418

Query: 898  VKEAKKQLYSENGRYPDTKEIVEATGLSMKRLTAVMLTPKAPRSLDQKVGFNQNLKLSEV 1077
            VKEA+KQLYSENGR+PD +E+ EA GLSMKRL+AV+LTPKAPRSLDQK+G N +LK SEV
Sbjct: 419  VKEARKQLYSENGRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKPSEV 478

Query: 1078 IADPDAQSSEEILMKEFMKQDLNKVLNSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGI 1257
            IADP+A+++EE+LMK+FMKQDL KVLN+LNPRE QV+RWRFGLEDGRMKTLQEIGE+MG+
Sbjct: 479  IADPEAETAEELLMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQEIGEIMGV 538

Query: 1258 SRERVRQIESCAFXXXXXXXXXXXXXQYVVS 1350
            SRER+RQIES AF             QY+++
Sbjct: 539  SRERIRQIESSAFRKLKNKKRTKQLKQYLLA 569


>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
          Length = 575

 Score =  508 bits (1307), Expect = e-141
 Identities = 276/455 (60%), Positives = 320/455 (70%), Gaps = 5/455 (1%)
 Frame = +1

Query: 1    EVAKDAAQIIGSNIVVTLEKTQGLPAXXXXXXXXXXXXXXXXXAAK---VDHSSTFEEES 171
            +VAKDAA+++G N      K++  PA                   +   +   S   E  
Sbjct: 124  KVAKDAARLVGKN---NSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAETG 180

Query: 172  NEDLSTQVMTKSDLSDLTQT--ELEDNSLDLPEKIAVRSGRQSEXXXXXXXXXXXXXXXV 345
              D ++      D  DL  T  ELE    +  + I VRS RQ E               V
Sbjct: 181  MVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGV 240

Query: 346  LXXXXXXXXXXXXPPVQDVDYTDPLRYLRGTTSISKLLTANEELELSKAIQXXXXXXXXX 525
            +              +Q+VDY+DPLRYLRGTTS S+LLTA EELELS+ IQ         
Sbjct: 241  VSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQ 300

Query: 526  XXXXXRNGGQPTFAQWAAAAGIDQRTLRKRLSYGAVCKDKMIKSNIRLVISIAKNYQGAG 705
                 R G +PTFAQWAAAAG+DQ+TLR+R +YG  CKDKMIKSNIRLVISIAKNYQGAG
Sbjct: 301  EDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAG 360

Query: 706  MNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 885
            MN+QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE
Sbjct: 361  MNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 420

Query: 886  ATYRVKEAKKQLYSENGRYPDTKEIVEATGLSMKRLTAVMLTPKAPRSLDQKVGFNQNLK 1065
            ATYRVKEA+KQLYSENGR+P+ +E+ EATGLSMKRL AV+LTPKAPRSLDQK+G NQNLK
Sbjct: 421  ATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLK 480

Query: 1066 LSEVIADPDAQSSEEILMKEFMKQDLNKVLNSLNPREKQVIRWRFGLEDGRMKTLQEIGE 1245
             SEVIADPDA+++EE+L+K+FM++DL KVLNSLNPREKQVIRWR+GLEDGR KTLQEIGE
Sbjct: 481  PSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGE 540

Query: 1246 LMGISRERVRQIESCAFXXXXXXXXXXXXXQYVVS 1350
            LMG+SRER+RQIESCAF             QY+VS
Sbjct: 541  LMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 575


>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 578

 Score =  508 bits (1307), Expect = e-141
 Identities = 276/455 (60%), Positives = 320/455 (70%), Gaps = 5/455 (1%)
 Frame = +1

Query: 1    EVAKDAAQIIGSNIVVTLEKTQGLPAXXXXXXXXXXXXXXXXXAAK---VDHSSTFEEES 171
            +VAKDAA+++G N      K++  PA                   +   +   S   E  
Sbjct: 127  KVAKDAARLVGKN---NSAKSETKPASFLSGDDTSQFRRIQFTETERIGILGDSVGAETG 183

Query: 172  NEDLSTQVMTKSDLSDLTQT--ELEDNSLDLPEKIAVRSGRQSEXXXXXXXXXXXXXXXV 345
              D ++      D  DL  T  ELE    +  + I VRS RQ E               V
Sbjct: 184  MVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVERKARRARAAEKASAGV 243

Query: 346  LXXXXXXXXXXXXPPVQDVDYTDPLRYLRGTTSISKLLTANEELELSKAIQXXXXXXXXX 525
            +              +Q+VDY+DPLRYLRGTTS S+LLTA EELELS+ IQ         
Sbjct: 244  VSVRSGSTSRRKRVSLQEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQ 303

Query: 526  XXXXXRNGGQPTFAQWAAAAGIDQRTLRKRLSYGAVCKDKMIKSNIRLVISIAKNYQGAG 705
                 R G +PTFAQWAAAAG+DQ+TLR+R +YG  CKDKMIKSNIRLVISIAKNYQGAG
Sbjct: 304  EDLEERFGVKPTFAQWAAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAG 363

Query: 706  MNLQDLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 885
            MN+QDLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE
Sbjct: 364  MNIQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVE 423

Query: 886  ATYRVKEAKKQLYSENGRYPDTKEIVEATGLSMKRLTAVMLTPKAPRSLDQKVGFNQNLK 1065
            ATYRVKEA+KQLYSENGR+P+ +E+ EATGLSMKRL AV+LTPKAPRSLDQK+G NQNLK
Sbjct: 424  ATYRVKEARKQLYSENGRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLK 483

Query: 1066 LSEVIADPDAQSSEEILMKEFMKQDLNKVLNSLNPREKQVIRWRFGLEDGRMKTLQEIGE 1245
             SEVIADPDA+++EE+L+K+FM++DL KVLNSLNPREKQVIRWR+GLEDGR KTLQEIGE
Sbjct: 484  PSEVIADPDAETAEELLIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGE 543

Query: 1246 LMGISRERVRQIESCAFXXXXXXXXXXXXXQYVVS 1350
            LMG+SRER+RQIESCAF             QY+VS
Sbjct: 544  LMGVSRERIRQIESCAFRKLKNKRRTKHLQQYLVS 578


>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
            gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
            polymerase sigma factor sigB-like [Cucumis sativus]
          Length = 580

 Score =  504 bits (1298), Expect = e-140
 Identities = 261/384 (67%), Positives = 297/384 (77%)
 Frame = +1

Query: 199  TKSDLSDLTQTELEDNSLDLPEKIAVRSGRQSEXXXXXXXXXXXXXXXVLXXXXXXXXXX 378
            T+SD  + T  ELE    +L E I V+S RQ+E               VL          
Sbjct: 197  TESDDMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRK 256

Query: 379  XXPPVQDVDYTDPLRYLRGTTSISKLLTANEELELSKAIQXXXXXXXXXXXXXXRNGGQP 558
                VQ+VDY+DPLRYLR TT+ S+LLTA EELELS+ IQ              R G +P
Sbjct: 257  KRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEP 316

Query: 559  TFAQWAAAAGIDQRTLRKRLSYGAVCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGC 738
            TFAQWAAAAG++QRTLRKRL+YG +CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGC
Sbjct: 317  TFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGC 376

Query: 739  RGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEAKKQ 918
            RGLV+GAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEA+KQ
Sbjct: 377  RGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQ 436

Query: 919  LYSENGRYPDTKEIVEATGLSMKRLTAVMLTPKAPRSLDQKVGFNQNLKLSEVIADPDAQ 1098
            L  ENGR+PD KEI EA GLSMKRL AV++TPKAPRSL+QK+G NQNLK SEVI+DP+A+
Sbjct: 437  LLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAE 496

Query: 1099 SSEEILMKEFMKQDLNKVLNSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGISRERVRQ 1278
            + E++L+K+FMKQDL KVL+SLNPREKQVIRWRFG+EDGRMKTLQEIGE+MG+SRER+RQ
Sbjct: 497  TCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQ 556

Query: 1279 IESCAFXXXXXXXXXXXXXQYVVS 1350
            IESCAF             QYV+S
Sbjct: 557  IESCAFRKLKNKKRTKHLQQYVMS 580


>ref|XP_002319746.1| predicted protein [Populus trichocarpa] gi|222858122|gb|EEE95669.1|
            predicted protein [Populus trichocarpa]
          Length = 567

 Score =  494 bits (1271), Expect = e-137
 Identities = 266/451 (58%), Positives = 318/451 (70%), Gaps = 1/451 (0%)
 Frame = +1

Query: 1    EVAKDAAQIIGSNIVVTLEKTQGLPAXXXXXXXXXXXXXXXXXAAKVDHSSTFEEESNED 180
            +VAKDAA++  +   +  E    + +                 A  +  S + E    E+
Sbjct: 117  KVAKDAAEMAKNYSSMKKETKIPIASTTDSFSSMWSLLTEKERADIIGDSVSAETRLREE 176

Query: 181  LSTQVMTKS-DLSDLTQTELEDNSLDLPEKIAVRSGRQSEXXXXXXXXXXXXXXXVLXXX 357
             S Q  T+  D  + TQ EL      L E IAVRS RQ+E               V+   
Sbjct: 177  YSVQYPTEEYDCLEPTQEELALLQKQLSEGIAVRSKRQTERKARRARAAEKAAANVVSVK 236

Query: 358  XXXXXXXXXPPVQDVDYTDPLRYLRGTTSISKLLTANEELELSKAIQXXXXXXXXXXXXX 537
                      P+Q+VD +DPLR+ RG +S S+LL+A EE+ELS+ IQ             
Sbjct: 237  SGSTSKKKRVPLQEVDQSDPLRFFRGASSSSRLLSATEEVELSEGIQDLLKLERIEEELK 296

Query: 538  XRNGGQPTFAQWAAAAGIDQRTLRKRLSYGAVCKDKMIKSNIRLVISIAKNYQGAGMNLQ 717
             R GG+P+FAQWAAAAG+DQ TLRKRL+YG +CKDKMIKSN+RLVISIAKNYQG GMNLQ
Sbjct: 297  ERFGGEPSFAQWAAAAGVDQLTLRKRLNYGILCKDKMIKSNVRLVISIAKNYQGTGMNLQ 356

Query: 718  DLVQEGCRGLVKGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYR 897
            DLVQEGCRGLV+GAEKFDASKGFKFSTYAHWWIKQAVRKSLSD+SRTIRLPFHMV+ATYR
Sbjct: 357  DLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKSLSDRSRTIRLPFHMVDATYR 416

Query: 898  VKEAKKQLYSENGRYPDTKEIVEATGLSMKRLTAVMLTPKAPRSLDQKVGFNQNLKLSEV 1077
            VKEA+KQLYSENGR+PD KE+ EA GLSMKRL+AV+LTPKAPRSLDQK+GFN +LKLSEV
Sbjct: 417  VKEARKQLYSENGRHPDDKEVAEAAGLSMKRLSAVLLTPKAPRSLDQKMGFNMDLKLSEV 476

Query: 1078 IADPDAQSSEEILMKEFMKQDLNKVLNSLNPREKQVIRWRFGLEDGRMKTLQEIGELMGI 1257
             ADP+A+++E++LMKEFMK+DL KVL SL+PRE QV+RWRFG+EDGRMKTLQEIGELMG+
Sbjct: 477  TADPEAETAEDLLMKEFMKKDLAKVLGSLSPRENQVVRWRFGMEDGRMKTLQEIGELMGV 536

Query: 1258 SRERVRQIESCAFXXXXXXXXXXXXXQYVVS 1350
            SRERVRQIE  AF             QY+V+
Sbjct: 537  SRERVRQIELSAFRKLKNKNRTKQLRQYMVA 567