BLASTX nr result

ID: Dioscorea21_contig00004521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00004521
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311458.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
gb|ABK95116.1| unknown [Populus trichocarpa]                          104   8e-21
ref|XP_002315940.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   101   7e-20
ref|XP_002531628.1| conserved hypothetical protein [Ricinus comm...   100   1e-19

>ref|XP_002311458.1| predicted protein [Populus trichocarpa] gi|222851278|gb|EEE88825.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  107 bits (266), Expect = 2e-21
 Identities = 74/174 (42%), Positives = 101/174 (58%), Gaps = 22/174 (12%)
 Frame = -3

Query: 551 QRVRLKTSAPSVLKL----DDGPAWHQAITRKARTPRPKPGVITSVVKSE------PVVP 402
           +RVRLKT++   L L    +  P+WH   TRKARTPR    V  S +         P+VP
Sbjct: 54  ERVRLKTASLKSLDLCSKENSVPSWHGGFTRKARTPRHGKPVSQSKIAETIRNIPIPLVP 113

Query: 401 DL--EAVSADENNVGEEDQLVYHRVPEFDPLLAEFCSPD----------PAGGLDDMHGF 258
           ++  + +S ++N   EE+ L+Y RVP FDP +A+ C+            PAGG D     
Sbjct: 114 EVGSDEISHEDN---EEEHLLY-RVPIFDPFVADLCASTTISNEAGAIVPAGGNDG---- 165

Query: 257 GSKTEEGELPESGSLAGFLPADDDVDLAEFAADMETLLGRGLEEDAFCMESLGI 96
              T++     +GSL GFLP+D  +DLAEFAADME+LLGRGLE ++F ME LG+
Sbjct: 166 ---TDQRVADSNGSLPGFLPSD--MDLAEFAADMESLLGRGLENESFGMEELGL 214


>gb|ABK95116.1| unknown [Populus trichocarpa]
          Length = 444

 Score =  104 bits (260), Expect = 8e-21
 Identities = 78/183 (42%), Positives = 104/183 (56%), Gaps = 31/183 (16%)
 Frame = -3

Query: 551 QRVRLKTSAPSVLKL----DDGPAWHQAITRKARTPRPKPGVITSVVKSE------PVVP 402
           +RVRLKT++   L L    +  P+WH   TRKARTPR    V  S +         P+VP
Sbjct: 57  ERVRLKTASLKSLDLCSKENSVPSWHGGFTRKARTPRHGKPVSQSKIAETIRNIPIPLVP 116

Query: 401 DL--EAVSADENNVGEEDQLVYHRVPEFDPLLAEFCSPD----------PAGGLD----- 273
           ++  + +S ++N   EE+ L+Y RVP FDP +A+ C+            PAGG D     
Sbjct: 117 EVGSDEISHEDN---EEEHLLY-RVPIFDPFVADLCASTTISNEAGAIVPAGGNDGTDQR 172

Query: 272 --DMHGFGSKTEEG--ELPESGSLAGFLPADDDVDLAEFAADMETLLGRGLEEDAFCMES 105
             D +G  SK   G  E  +  SL GFLP+D  +DLAEFAADME+LLGRGLE ++F ME 
Sbjct: 173 VADSNGVESKILIGAIERRDVESLPGFLPSD--MDLAEFAADMESLLGRGLENESFGMEE 230

Query: 104 LGI 96
           LG+
Sbjct: 231 LGL 233


>ref|XP_002315940.1| predicted protein [Populus trichocarpa] gi|222864980|gb|EEF02111.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  103 bits (257), Expect = 2e-20
 Identities = 78/182 (42%), Positives = 103/182 (56%), Gaps = 30/182 (16%)
 Frame = -3

Query: 551 QRVRLKT----SAPSVLKLDDGPAWHQAITRKARTPRPKPGVITSVVKSE------PVVP 402
           +RVRLK+    S+ +  K +  P+WH   TRKARTPR    V  S ++        P+VP
Sbjct: 57  ERVRLKSASLKSSDAGSKENSMPSWHGGFTRKARTPRHGKPVSRSKIEETTRNIPIPLVP 116

Query: 401 DL--EAVSADENNVGEEDQLVYHRVPEFDPLLAEFCSPD----------PAGGLD----- 273
           ++  + +S ++N   EE+ L+Y RVP FDP  AE C+            PAGG D     
Sbjct: 117 EVGSDEISLEDN---EEEHLLY-RVPIFDPFAAELCTSTTVSNEAGAVVPAGGTDTDQRA 172

Query: 272 -DMHGFGSKTEEG--ELPESGSLAGFLPADDDVDLAEFAADMETLLGRGLEEDAFCMESL 102
            D  G  SK   G  E  +  SL GFLP+D  +DLAEFAADME+LLGRGLE ++F ME L
Sbjct: 173 ADSSGTESKVLLGGSEGKDVESLHGFLPSD--MDLAEFAADMESLLGRGLENESFGMEEL 230

Query: 101 GI 96
           G+
Sbjct: 231 GL 232


>ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
           gi|297737819|emb|CBI27020.3| unnamed protein product
           [Vitis vinifera]
          Length = 432

 Score =  101 bits (252), Expect = 7e-20
 Identities = 66/171 (38%), Positives = 98/171 (57%), Gaps = 19/171 (11%)
 Frame = -3

Query: 551 QRVRLKTSA---PSVLKLDDG-PAWHQAITRKARTPRPKPGVITSVVKSEPV----VPDL 396
           +RVRLKT++   P    L++  P+WHQ  TRKARTPR          KS+ +    +P +
Sbjct: 57  ERVRLKTASLKLPGADSLENSMPSWHQGFTRKARTPRHGKPAAHPAFKSDELTRNPLPFV 116

Query: 395 EAVSADENNVGEEDQLVYHRVPEFDPLLAEFCSPDP--------AGGLDDMHGFGSKTEE 240
             + ADE +  + ++ + +RVP FDP +AE C+           A   +     GS+T+ 
Sbjct: 117 PEIGADETSYDDNEEQLLYRVPIFDPFVAELCASTNSNEAVTTVANDTETADVTGSETKA 176

Query: 239 ---GELPESGSLAGFLPADDDVDLAEFAADMETLLGRGLEEDAFCMESLGI 96
              G   +  SL GFLP+D  +DLAEFAAD+E+LLG+GL+ ++F ME LG+
Sbjct: 177 LVAGRGHDVDSLHGFLPSD--MDLAEFAADVESLLGKGLDNESFGMEGLGL 225


>ref|XP_002531628.1| conserved hypothetical protein [Ricinus communis]
           gi|223528746|gb|EEF30756.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 468

 Score =  100 bits (250), Expect = 1e-19
 Identities = 74/186 (39%), Positives = 105/186 (56%), Gaps = 34/186 (18%)
 Frame = -3

Query: 551 QRVRLKTSAPSVLKLDDG-------PAWHQAITRKARTPRPKPG--VITSVVKSE----- 414
           +RVRLK S+   L +          P+WHQ  TRKARTPR   G   + S++K E     
Sbjct: 57  ERVRLKISSLKSLDIISKGSSVITVPSWHQGFTRKARTPRNGHGNKPLLSLLKIEEKSRN 116

Query: 413 --PVVPDL---EAVSADENNVGEEDQLVYHRVPEFDPLLAEFCSPDPAGGLDDMH----- 264
             P+VP++   + +S ++NN  EE+QL+Y RVP FDP +AE C+P       D       
Sbjct: 117 PIPLVPEVGSDDQISHEDNN--EEEQLLY-RVPIFDPFVAELCTPTTISNEADQTTTAPF 173

Query: 263 ----GFGSKTEE------GELPESGSLAGFLPADDDVDLAEFAADMETLLGRGLEEDAFC 114
               G G+ T++      G   ++  L GFLP++   DLA+FAAD+E+LLGRGLE ++F 
Sbjct: 174 TAGGGNGNDTDQTVAGANGIESKASYLHGFLPSE--TDLADFAADVESLLGRGLENESFG 231

Query: 113 MESLGI 96
           ME LG+
Sbjct: 232 MEDLGL 237


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