BLASTX nr result
ID: Dioscorea21_contig00003997
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00003997
(1663 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28686.3| unnamed protein product [Vitis vinifera] 553 e-155
ref|XP_002267152.1| PREDICTED: violaxanthin de-epoxidase, chloro... 553 e-155
gb|AFP28802.1| violaxanthin de-epoxidase 1 [Vitis vinifera] 548 e-153
ref|XP_002319136.1| predicted protein [Populus trichocarpa] gi|2... 545 e-152
gb|AAX59986.2| violaxanthin de-epoxidase [Zingiber officinale] 541 e-151
>emb|CBI28686.3| unnamed protein product [Vitis vinifera]
Length = 437
Score = 553 bits (1426), Expect = e-155
Identities = 249/308 (80%), Positives = 285/308 (92%)
Frame = -1
Query: 1276 LAVLPNVAKQFWKVHVITITGFLMSIFLVVPSTDAVDALKTCTCLLKECRVELAKCIANP 1097
+A + N+ K++ ++H + + G L L++PS +AVDALKTCTCLLKECR+ELAKCIANP
Sbjct: 62 VATVLNLLKKWSQLHFMKVVGVLACTMLLIPSANAVDALKTCTCLLKECRLELAKCIANP 121
Query: 1096 SCAANIACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSDVGEFKVP 917
SCAAN+ACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSD+GEF VP
Sbjct: 122 SCAANVACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSDIGEFPVP 181
Query: 916 GPSALVRNFNISDFSGKWYITRGLNPTFDTFDCQLHEFHVESGKLIGNISWRIRTPDSGF 737
P+ LV+NFNI+DFSGKW+IT GLNPTFDTFDCQLHEFH ES KL+GN+SWRIRTPD GF
Sbjct: 182 DPAVLVKNFNIADFSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVGNLSWRIRTPDGGF 241
Query: 736 FTRSTLQKFVQDPSQPGILYNHDNEYLHYQDDWYILSSKVKNEPDDYIFVYYIGRNDAWD 557
FTRST+Q+FVQDP+QPGILYNHDNEYLHYQDDWY+LSSK++N+PDDY+FVYY GRNDAWD
Sbjct: 242 FTRSTMQRFVQDPNQPGILYNHDNEYLHYQDDWYVLSSKIENKPDDYVFVYYQGRNDAWD 301
Query: 556 GYGGAVVYTRSSVLPESIIPELEKAAKSVGRDFSKFIKTDNTCGPEPPLVERIEKTVEAG 377
GYGGAVVYTRS+ LPESI+PELEKAAKSVGRDF+KFI+TDNTCGPEPPLVER+EKTVE G
Sbjct: 302 GYGGAVVYTRSATLPESIVPELEKAAKSVGRDFNKFIRTDNTCGPEPPLVERLEKTVEEG 361
Query: 376 EETILREV 353
E+TI+REV
Sbjct: 362 EKTIIREV 369
Score = 85.5 bits (210), Expect = 4e-14
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = -3
Query: 215 VGKTEATLLQRLAEGFTELKRDVENFFKGLGKEEMELLNDLKMEATEIEKVFGRALPLRK 36
+GKTE T + L EGF EL++D E F K L KEEM+LL++LKMEA+E+EK+FGRALPLRK
Sbjct: 376 LGKTEKTFFETLMEGFKELRKDEEYFLKELSKEEMDLLSELKMEASEVEKLFGRALPLRK 435
Query: 35 LR 30
LR
Sbjct: 436 LR 437
>ref|XP_002267152.1| PREDICTED: violaxanthin de-epoxidase, chloroplastic [Vitis vinifera]
Length = 479
Score = 553 bits (1426), Expect = e-155
Identities = 249/308 (80%), Positives = 285/308 (92%)
Frame = -1
Query: 1276 LAVLPNVAKQFWKVHVITITGFLMSIFLVVPSTDAVDALKTCTCLLKECRVELAKCIANP 1097
+A + N+ K++ ++H + + G L L++PS +AVDALKTCTCLLKECR+ELAKCIANP
Sbjct: 104 VATVLNLLKKWSQLHFMKVVGVLACTMLLIPSANAVDALKTCTCLLKECRLELAKCIANP 163
Query: 1096 SCAANIACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSDVGEFKVP 917
SCAAN+ACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSD+GEF VP
Sbjct: 164 SCAANVACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSDIGEFPVP 223
Query: 916 GPSALVRNFNISDFSGKWYITRGLNPTFDTFDCQLHEFHVESGKLIGNISWRIRTPDSGF 737
P+ LV+NFNI+DFSGKW+IT GLNPTFDTFDCQLHEFH ES KL+GN+SWRIRTPD GF
Sbjct: 224 DPAVLVKNFNIADFSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVGNLSWRIRTPDGGF 283
Query: 736 FTRSTLQKFVQDPSQPGILYNHDNEYLHYQDDWYILSSKVKNEPDDYIFVYYIGRNDAWD 557
FTRST+Q+FVQDP+QPGILYNHDNEYLHYQDDWY+LSSK++N+PDDY+FVYY GRNDAWD
Sbjct: 284 FTRSTMQRFVQDPNQPGILYNHDNEYLHYQDDWYVLSSKIENKPDDYVFVYYQGRNDAWD 343
Query: 556 GYGGAVVYTRSSVLPESIIPELEKAAKSVGRDFSKFIKTDNTCGPEPPLVERIEKTVEAG 377
GYGGAVVYTRS+ LPESI+PELEKAAKSVGRDF+KFI+TDNTCGPEPPLVER+EKTVE G
Sbjct: 344 GYGGAVVYTRSATLPESIVPELEKAAKSVGRDFNKFIRTDNTCGPEPPLVERLEKTVEEG 403
Query: 376 EETILREV 353
E+TI+REV
Sbjct: 404 EKTIIREV 411
Score = 85.5 bits (210), Expect = 4e-14
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = -3
Query: 215 VGKTEATLLQRLAEGFTELKRDVENFFKGLGKEEMELLNDLKMEATEIEKVFGRALPLRK 36
+GKTE T + L EGF EL++D E F K L KEEM+LL++LKMEA+E+EK+FGRALPLRK
Sbjct: 418 LGKTEKTFFETLMEGFKELRKDEEYFLKELSKEEMDLLSELKMEASEVEKLFGRALPLRK 477
Query: 35 LR 30
LR
Sbjct: 478 LR 479
>gb|AFP28802.1| violaxanthin de-epoxidase 1 [Vitis vinifera]
Length = 479
Score = 548 bits (1413), Expect = e-153
Identities = 247/308 (80%), Positives = 284/308 (92%)
Frame = -1
Query: 1276 LAVLPNVAKQFWKVHVITITGFLMSIFLVVPSTDAVDALKTCTCLLKECRVELAKCIANP 1097
+A + N+ K++ ++H + + G L L++PS +AVDALKTCTCLLKECR+ELAKCIANP
Sbjct: 104 VATVLNLLKKWSQLHFMKVVGVLACTMLLIPSANAVDALKTCTCLLKECRLELAKCIANP 163
Query: 1096 SCAANIACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSDVGEFKVP 917
SCAAN+ACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSD+GEF VP
Sbjct: 164 SCAANVACLQTCNNRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPRKSDIGEFPVP 223
Query: 916 GPSALVRNFNISDFSGKWYITRGLNPTFDTFDCQLHEFHVESGKLIGNISWRIRTPDSGF 737
P+ LV++FNI+DFSGKW+IT GLNPTFDTFDCQLHEFH ES KL+ N+SWRIRTPD GF
Sbjct: 224 DPAVLVKSFNIADFSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVRNLSWRIRTPDGGF 283
Query: 736 FTRSTLQKFVQDPSQPGILYNHDNEYLHYQDDWYILSSKVKNEPDDYIFVYYIGRNDAWD 557
FTRST+Q+FVQDP+QPGILYNHDNEYLHYQDDWY+LSSK++N+PDDY+FVYY GRNDAWD
Sbjct: 284 FTRSTMQRFVQDPNQPGILYNHDNEYLHYQDDWYVLSSKIENKPDDYVFVYYQGRNDAWD 343
Query: 556 GYGGAVVYTRSSVLPESIIPELEKAAKSVGRDFSKFIKTDNTCGPEPPLVERIEKTVEAG 377
GYGGAVVYTRS+ LPESI+PELEKAAKSVGRDF+KFI+TDNTCGPEPPLVER+EKTVE G
Sbjct: 344 GYGGAVVYTRSATLPESIVPELEKAAKSVGRDFNKFIRTDNTCGPEPPLVERLEKTVEEG 403
Query: 376 EETILREV 353
E+TI+REV
Sbjct: 404 EKTIIREV 411
Score = 85.5 bits (210), Expect = 4e-14
Identities = 41/62 (66%), Positives = 51/62 (82%)
Frame = -3
Query: 215 VGKTEATLLQRLAEGFTELKRDVENFFKGLGKEEMELLNDLKMEATEIEKVFGRALPLRK 36
+GKTE T + L EGF EL++D E F K L KEEM+LL++LKMEA+E+EK+FGRALPLRK
Sbjct: 418 LGKTEKTFFETLMEGFKELRKDEEYFLKELSKEEMDLLSELKMEASEVEKLFGRALPLRK 477
Query: 35 LR 30
LR
Sbjct: 478 LR 479
>ref|XP_002319136.1| predicted protein [Populus trichocarpa] gi|222857512|gb|EEE95059.1|
predicted protein [Populus trichocarpa]
Length = 489
Score = 545 bits (1404), Expect = e-152
Identities = 272/404 (67%), Positives = 315/404 (77%), Gaps = 15/404 (3%)
Frame = -1
Query: 1519 SVCTNHFPSYGCVHRARCNAQHHQSLSEFKLWANTNISRTCLWMKSQSDSHQFKCGG--- 1349
SV + S G HR + H LS+F W N SR +++S SH+ GG
Sbjct: 21 SVAKSGLASDGRFHRRQRLHFHGAVLSQF--WPN---SRKLRYIQSIR-SHRHHYGGVIR 74
Query: 1348 -----SHWNSRSEIIAASSKSNVH--VEGAELAVLP--NVAKQFWKVHVITITGFLMSIF 1196
S W + + +SS ++ +E VL N K+ + + + G L+
Sbjct: 75 CSNQLSDWTKKFSSLCSSSSRSMPKAIERLNFVVLSVTNALKERNNLECLKLAGILLCAL 134
Query: 1195 LVVPSTDAVDALKTCTCLLKECRVELAKCIANPSCAANIACLQTCNNRPDETECQ---IK 1025
LV+PS DAVDALKTCTCLLKECR+ELAKCIANPSCAAN+ACLQTCNNRPDETECQ IK
Sbjct: 135 LVIPSADAVDALKTCTCLLKECRLELAKCIANPSCAANVACLQTCNNRPDETECQASSIK 194
Query: 1024 CGDLFENNVVDEFNECAVSRKKCVPRKSDVGEFKVPGPSALVRNFNISDFSGKWYITRGL 845
CGDLFEN+VVDEFNECAVSRKKCVPRKSDVGEF VP P+ LV NFN++DFSGKW+IT GL
Sbjct: 195 CGDLFENSVVDEFNECAVSRKKCVPRKSDVGEFPVPDPAVLVENFNMADFSGKWFITSGL 254
Query: 844 NPTFDTFDCQLHEFHVESGKLIGNISWRIRTPDSGFFTRSTLQKFVQDPSQPGILYNHDN 665
NPTFDTFDCQLHEFH ES KL+GN+SWRI+TPD+GFFTRS +Q+FVQDP PGILYNHDN
Sbjct: 255 NPTFDTFDCQLHEFHTESNKLVGNLSWRIKTPDTGFFTRSAVQRFVQDPVHPGILYNHDN 314
Query: 664 EYLHYQDDWYILSSKVKNEPDDYIFVYYIGRNDAWDGYGGAVVYTRSSVLPESIIPELEK 485
EYLHYQDDWYILSSK++N+ DDY+FVYY GRNDAWDGYGGAVVYTRS+VLPESI+PELEK
Sbjct: 315 EYLHYQDDWYILSSKIENKQDDYVFVYYQGRNDAWDGYGGAVVYTRSAVLPESIVPELEK 374
Query: 484 AAKSVGRDFSKFIKTDNTCGPEPPLVERIEKTVEAGEETILREV 353
AAKSVGRDFSKFI+TDNTCGPEPPLVER+EKTVE GE+TI++EV
Sbjct: 375 AAKSVGRDFSKFIRTDNTCGPEPPLVERLEKTVEEGEKTIIKEV 418
Score = 87.8 bits (216), Expect = 8e-15
Identities = 41/61 (67%), Positives = 51/61 (83%)
Frame = -3
Query: 212 GKTEATLLQRLAEGFTELKRDVENFFKGLGKEEMELLNDLKMEATEIEKVFGRALPLRKL 33
GKTE +L QRL EGF E+++D ENF + L KEE +LLNDL+MEA E+EK+FGRALP+RKL
Sbjct: 429 GKTELSLFQRLTEGFKEIQKDEENFLRELSKEETDLLNDLRMEAGEVEKLFGRALPIRKL 488
Query: 32 R 30
R
Sbjct: 489 R 489
>gb|AAX59986.2| violaxanthin de-epoxidase [Zingiber officinale]
Length = 476
Score = 541 bits (1394), Expect = e-151
Identities = 265/391 (67%), Positives = 311/391 (79%), Gaps = 6/391 (1%)
Frame = -1
Query: 1507 NHFPSYGCVHRARCNAQHHQSLSEFKLWANTNISRTCLWMKSQSDSHQFKCGGSHWNSRS 1328
NH Y + C +H+ + K W+N +R +W KSQ +S + +C + +
Sbjct: 18 NHVIKYNRKLGSVCWYRHYATE---KSWSNRGAARMNIWPKSQMNSGKLECNENAVSVGR 74
Query: 1327 EIIAASS----KSNVHVEGAEL--AVLPNVAKQFWKVHVITITGFLMSIFLVVPSTDAVD 1166
I+AA+ KS+ G +L ++ + Q+ ++ ++ I+ FL L VPS DA D
Sbjct: 75 NIVAATIFTAFKSSSENNGIKLPRSLWSPIINQWHRLDLMIISVFLSCTVLFVPSVDAAD 134
Query: 1165 ALKTCTCLLKECRVELAKCIANPSCAANIACLQTCNNRPDETECQIKCGDLFENNVVDEF 986
ALKTC+CLLKECRVELAKCIANPSCAANIACLQTCN+RPDETECQIKCGDLFEN+VVDEF
Sbjct: 135 ALKTCSCLLKECRVELAKCIANPSCAANIACLQTCNDRPDETECQIKCGDLFENSVVDEF 194
Query: 985 NECAVSRKKCVPRKSDVGEFKVPGPSALVRNFNISDFSGKWYITRGLNPTFDTFDCQLHE 806
NECAVS KKCVPRKS VGEF VP PS LV+ FNISDFSGKW+IT GLNPTFDTF+C+LHE
Sbjct: 195 NECAVSSKKCVPRKSTVGEFPVPDPSILVKTFNISDFSGKWFITSGLNPTFDTFNCRLHE 254
Query: 805 FHVESGKLIGNISWRIRTPDSGFFTRSTLQKFVQDPSQPGILYNHDNEYLHYQDDWYILS 626
FHVES KL+GN+SWRI T D GFF RS +Q+FVQD SQPGILYNHDNEYLHYQDDWYI+S
Sbjct: 255 FHVESDKLVGNLSWRISTLDGGFFNRSAVQRFVQDSSQPGILYNHDNEYLHYQDDWYIIS 314
Query: 625 SKVKNEPDDYIFVYYIGRNDAWDGYGGAVVYTRSSVLPESIIPELEKAAKSVGRDFSKFI 446
SKV+N+ DDYIFVYY GRNDAWDGYGGAVVYTRS+VLP+SI+PELEKAAKS+GRDFS FI
Sbjct: 315 SKVENKEDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPDSIVPELEKAAKSIGRDFSNFI 374
Query: 445 KTDNTCGPEPPLVERIEKTVEAGEETILREV 353
KTDNTCGPEPPLVER+EKTVE GE+TI+REV
Sbjct: 375 KTDNTCGPEPPLVERLEKTVEEGEKTIIREV 405
Score = 89.0 bits (219), Expect = 3e-15
Identities = 39/62 (62%), Positives = 53/62 (85%)
Frame = -3
Query: 215 VGKTEATLLQRLAEGFTELKRDVENFFKGLGKEEMELLNDLKMEATEIEKVFGRALPLRK 36
+GKTE TL Q+L++GF EL++D EN KGL KEE+++L+DLKMEA ++EK+FG ALP+RK
Sbjct: 415 IGKTEVTLFQKLSDGFMELEKDTENLLKGLSKEEIQILDDLKMEAKQVEKIFGGALPIRK 474
Query: 35 LR 30
LR
Sbjct: 475 LR 476