BLASTX nr result

ID: Dioscorea21_contig00003995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003995
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_178238.1| ribose 5-phosphate isomerase A [Arabidopsis tha...   233   8e-59
ref|XP_002284079.1| PREDICTED: probable ribose-5-phosphate isome...   227   4e-57
ref|XP_002282058.2| PREDICTED: probable ribose-5-phosphate isome...   223   6e-56
emb|CBI16263.3| unnamed protein product [Vitis vinifera]              223   6e-56
ref|XP_004135061.1| PREDICTED: probable ribose-5-phosphate isome...   223   8e-56

>ref|NP_178238.1| ribose 5-phosphate isomerase A [Arabidopsis thaliana]
           gi|6226027|sp|Q9ZU38.1|RPIA_ARATH RecName: Full=Probable
           ribose-5-phosphate isomerase; AltName:
           Full=Phosphoriboisomerase gi|4262236|gb|AAD14529.1|
           putative ribose 5-phosphate isomerase [Arabidopsis
           thaliana] gi|15809810|gb|AAL06833.1| At2g01290/F10A8.17
           [Arabidopsis thaliana] gi|17978867|gb|AAL47405.1|
           At2g01290/F10A8.17 [Arabidopsis thaliana]
           gi|91805381|gb|ABE65420.1| unknown [Arabidopsis
           thaliana] gi|330250335|gb|AEC05429.1| ribose 5-phosphate
           isomerase A [Arabidopsis thaliana]
          Length = 265

 Score =  233 bits (593), Expect = 8e-59
 Identities = 117/147 (79%), Positives = 133/147 (90%)
 Frame = +3

Query: 99  QDEQKRVAAYRAVDFVQSGMVLGLGTGSTAVHALDRIADLLRRGVLHDIVGIPTSKQTES 278
           QDE KR+AAY+AV+FV+SGMVLGLGTGSTA HA+DRI +LLR+G L +IVGIPTSK+T+ 
Sbjct: 33  QDELKRIAAYKAVEFVESGMVLGLGTGSTAKHAVDRIGELLRQGKLENIVGIPTSKKTQE 92

Query: 279 IARALKIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFIVIVD 458
            A +L IPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKF+VIVD
Sbjct: 93  QALSLGIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVD 152

Query: 459 ESKMVGRLGGSGLAVPVEIVPFGWSYT 539
           +SKMV  +GGS LA+PVEIVPF W +T
Sbjct: 153 DSKMVKHIGGSKLALPVEIVPFCWKFT 179


>ref|XP_002284079.1| PREDICTED: probable ribose-5-phosphate isomerase-like [Vitis
           vinifera]
          Length = 269

 Score =  227 bits (578), Expect = 4e-57
 Identities = 111/147 (75%), Positives = 132/147 (89%)
 Frame = +3

Query: 99  QDEQKRVAAYRAVDFVQSGMVLGLGTGSTAVHALDRIADLLRRGVLHDIVGIPTSKQTES 278
           QDE K++AAY+AV++V+SGMVLGLGTGSTA HA+DRI +LLR+G L +IVGIPTSK+T  
Sbjct: 38  QDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIVGIPTSKKTHE 97

Query: 279 IARALKIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFIVIVD 458
            A +L IPLSDLD+HP++DL+IDGADEVDP+LNLVKGRGGSLLREKM+EGA KKFIVIVD
Sbjct: 98  QAVSLGIPLSDLDSHPILDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFIVIVD 157

Query: 459 ESKMVGRLGGSGLAVPVEIVPFGWSYT 539
           ESK+V  LGGSGLA+PVEIVPF W +T
Sbjct: 158 ESKLVNHLGGSGLAMPVEIVPFCWKFT 184


>ref|XP_002282058.2| PREDICTED: probable ribose-5-phosphate isomerase-like [Vitis
           vinifera]
          Length = 345

 Score =  223 bits (568), Expect = 6e-56
 Identities = 109/147 (74%), Positives = 131/147 (89%)
 Frame = +3

Query: 99  QDEQKRVAAYRAVDFVQSGMVLGLGTGSTAVHALDRIADLLRRGVLHDIVGIPTSKQTES 278
           QDE K++AAY+AV++V+SGMVLGLGTGSTA HA+DRI +LLR+G L +IVGIPTSK T  
Sbjct: 38  QDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIVGIPTSKMTHE 97

Query: 279 IARALKIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFIVIVD 458
            A +L IPLSDLD++P++DL+IDGADEVDP+LNLVKGRGGSLLREKM+EGA KKF+VIVD
Sbjct: 98  QAVSLGIPLSDLDSYPILDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFVVIVD 157

Query: 459 ESKMVGRLGGSGLAVPVEIVPFGWSYT 539
           ESK+V  LGGSGLA+PVEIVPF W +T
Sbjct: 158 ESKLVNYLGGSGLAMPVEIVPFCWKFT 184


>emb|CBI16263.3| unnamed protein product [Vitis vinifera]
          Length = 322

 Score =  223 bits (568), Expect = 6e-56
 Identities = 109/147 (74%), Positives = 131/147 (89%)
 Frame = +3

Query: 99  QDEQKRVAAYRAVDFVQSGMVLGLGTGSTAVHALDRIADLLRRGVLHDIVGIPTSKQTES 278
           QDE K++AAY+AV++V+SGMVLGLGTGSTA HA+DRI +LLR+G L +IVGIPTSK T  
Sbjct: 56  QDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIVGIPTSKMTHE 115

Query: 279 IARALKIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFIVIVD 458
            A +L IPLSDLD++P++DL+IDGADEVDP+LNLVKGRGGSLLREKM+EGA KKF+VIVD
Sbjct: 116 QAVSLGIPLSDLDSYPILDLAIDGADEVDPYLNLVKGRGGSLLREKMVEGACKKFVVIVD 175

Query: 459 ESKMVGRLGGSGLAVPVEIVPFGWSYT 539
           ESK+V  LGGSGLA+PVEIVPF W +T
Sbjct: 176 ESKLVNYLGGSGLAMPVEIVPFCWKFT 202


>ref|XP_004135061.1| PREDICTED: probable ribose-5-phosphate isomerase-like [Cucumis
           sativus] gi|449493428|ref|XP_004159286.1| PREDICTED:
           probable ribose-5-phosphate isomerase-like [Cucumis
           sativus]
          Length = 275

 Score =  223 bits (567), Expect = 8e-56
 Identities = 109/147 (74%), Positives = 132/147 (89%)
 Frame = +3

Query: 99  QDEQKRVAAYRAVDFVQSGMVLGLGTGSTAVHALDRIADLLRRGVLHDIVGIPTSKQTES 278
           QDE K++AAY+AV++V+SGMVLGLGTGSTA HA+DRI +LLR+G L +I+GIPTSK+T  
Sbjct: 43  QDELKKIAAYKAVEYVESGMVLGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHE 102

Query: 279 IARALKIPLSDLDAHPVIDLSIDGADEVDPFLNLVKGRGGSLLREKMIEGASKKFIVIVD 458
            A +L IPLSDLD+HPV+DL+IDGADEVDP LNLVKGRGGSLLREKM+EGA KKF+VIVD
Sbjct: 103 QAVSLGIPLSDLDSHPVLDLAIDGADEVDPHLNLVKGRGGSLLREKMVEGACKKFVVIVD 162

Query: 459 ESKMVGRLGGSGLAVPVEIVPFGWSYT 539
           ESK+V  +GGSGLA+PVEIVPF W++T
Sbjct: 163 ESKLVKYVGGSGLAMPVEIVPFCWNFT 189


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