BLASTX nr result

ID: Dioscorea21_contig00003949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003949
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation...   559   e-157
ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|2...   554   e-155
gb|ABK92468.1| unknown [Populus trichocarpa]                          554   e-155
ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation...   552   e-155
ref|NP_001052582.1| Os04g0376500 [Oryza sativa Japonica Group] g...   551   e-154

>ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation factor 3 subunit H
           [Vitis vinifera] gi|296089621|emb|CBI39440.3| unnamed
           protein product [Vitis vinifera]
          Length = 337

 Score =  559 bits (1440), Expect = e-157
 Identities = 271/312 (86%), Positives = 292/312 (93%)
 Frame = -3

Query: 990 QMEGLAVLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIREDDEEIEADGANYQ 811
           Q+EGL +LKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIRE+DEEIEADGANYQ
Sbjct: 26  QIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEADGANYQ 85

Query: 810 LEMMRCLREVNVDNNTVGWYQSTLMGLYQTVELIETFMNYQENIRRCVCIIYDPSKSNQG 631
           LEMMRCLREVNVDNNTVGWYQSTL+G +QTVELIETFMNYQENIRRCVCIIYDPS+SNQG
Sbjct: 86  LEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSNQG 145

Query: 630 VLALKALKLSDSFMELYRNNEFNGEKLREKKVTWVDIFEEIPIKVSNSALISAFMTELEP 451
           VLALKALKLSDSFMELYRNN F GEKLREK ++WVDIFEEIPIKVSNSALISAFMTELE 
Sbjct: 146 VLALKALKLSDSFMELYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEA 205

Query: 450 DSPVAQCDFDRLQLSTSSFMERNLEFMIECMEDLSAEQNKFQYYYRNVSRXXXXXXAWLQ 271
           D+PV QCD+DRLQLST+ +MERNLEF+IECM+DLS EQ KFQ+YYRN+SR      AWLQ
Sbjct: 206 DTPVTQCDYDRLQLSTNPYMERNLEFLIECMDDLSMEQQKFQFYYRNLSRQQGQQQAWLQ 265

Query: 270 KRRTENMARKAAGEELLPEEDPSNPIFKPIPEPSRLDSYLINNQIANYCNQINGVAGQNF 91
           KRR ENMARK AGE+ LPEEDP+NPIFKPIPEPSRLDS+LI NQI+NYCNQINGVAGQ+F
Sbjct: 266 KRRAENMARKTAGEDPLPEEDPANPIFKPIPEPSRLDSFLITNQISNYCNQINGVAGQSF 325

Query: 90  SRLYLMKALHEN 55
           SRLYLMKALHEN
Sbjct: 326 SRLYLMKALHEN 337


>ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|222861210|gb|EEE98752.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  554 bits (1428), Expect = e-155
 Identities = 269/312 (86%), Positives = 292/312 (93%)
 Frame = -3

Query: 990 QMEGLAVLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIREDDEEIEADGANYQ 811
           Q+EGLAVLKIIKHCKEFSP+LVTGQLLGLDVGSVLEVTNCFPFPIRE+DEEIEA+GANYQ
Sbjct: 22  QIEGLAVLKIIKHCKEFSPSLVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEAEGANYQ 81

Query: 810 LEMMRCLREVNVDNNTVGWYQSTLMGLYQTVELIETFMNYQENIRRCVCIIYDPSKSNQG 631
           LEMMRCLREVNVDNNTVGWYQS L G +QTVELIETFMNYQENIRRCVCIIYDPS++NQG
Sbjct: 82  LEMMRCLREVNVDNNTVGWYQSMLFGCFQTVELIETFMNYQENIRRCVCIIYDPSRANQG 141

Query: 630 VLALKALKLSDSFMELYRNNEFNGEKLREKKVTWVDIFEEIPIKVSNSALISAFMTELEP 451
           VLALKALKLSDSFM+LYRNN F GEKLREK ++WVDIFEEIPIKVSNSALISAFMTELE 
Sbjct: 142 VLALKALKLSDSFMDLYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELED 201

Query: 450 DSPVAQCDFDRLQLSTSSFMERNLEFMIECMEDLSAEQNKFQYYYRNVSRXXXXXXAWLQ 271
           D+PV QCD+DRLQLSTS ++ERN+EF+IECM+DLS EQ KFQYYYRN+SR      AWLQ
Sbjct: 202 DTPVTQCDYDRLQLSTSPYLERNVEFLIECMDDLSMEQQKFQYYYRNLSRQQAQQQAWLQ 261

Query: 270 KRRTENMARKAAGEELLPEEDPSNPIFKPIPEPSRLDSYLINNQIANYCNQINGVAGQNF 91
           KRR+ENM+RKAAGEE LPEEDP NPIFKPIPEPSRLDS+LI NQIANYCNQINGV+GQ+F
Sbjct: 262 KRRSENMSRKAAGEEPLPEEDPLNPIFKPIPEPSRLDSFLITNQIANYCNQINGVSGQSF 321

Query: 90  SRLYLMKALHEN 55
           SRLYLMKALHEN
Sbjct: 322 SRLYLMKALHEN 333


>gb|ABK92468.1| unknown [Populus trichocarpa]
          Length = 341

 Score =  554 bits (1428), Expect = e-155
 Identities = 269/312 (86%), Positives = 292/312 (93%)
 Frame = -3

Query: 990 QMEGLAVLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIREDDEEIEADGANYQ 811
           Q+EGLAVLKIIKHCKEFSP+LVTGQLLGLDVGSVLEVTNCFPFPIRE+DEEIEA+GANYQ
Sbjct: 30  QIEGLAVLKIIKHCKEFSPSLVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEAEGANYQ 89

Query: 810 LEMMRCLREVNVDNNTVGWYQSTLMGLYQTVELIETFMNYQENIRRCVCIIYDPSKSNQG 631
           LEMMRCLREVNVDNNTVGWYQS L G +QTVELIETFMNYQENIRRCVCIIYDPS++NQG
Sbjct: 90  LEMMRCLREVNVDNNTVGWYQSMLFGCFQTVELIETFMNYQENIRRCVCIIYDPSRANQG 149

Query: 630 VLALKALKLSDSFMELYRNNEFNGEKLREKKVTWVDIFEEIPIKVSNSALISAFMTELEP 451
           VLALKALKLSDSFM+LYRNN F GEKLREK ++WVDIFEEIPIKVSNSALISAFMTELE 
Sbjct: 150 VLALKALKLSDSFMDLYRNNNFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELED 209

Query: 450 DSPVAQCDFDRLQLSTSSFMERNLEFMIECMEDLSAEQNKFQYYYRNVSRXXXXXXAWLQ 271
           D+PV QCD+DRLQLSTS ++ERN+EF+IECM+DLS EQ KFQYYYRN+SR      AWLQ
Sbjct: 210 DTPVTQCDYDRLQLSTSPYLERNVEFLIECMDDLSMEQQKFQYYYRNLSRQQAQQQAWLQ 269

Query: 270 KRRTENMARKAAGEELLPEEDPSNPIFKPIPEPSRLDSYLINNQIANYCNQINGVAGQNF 91
           KRR+ENM+RKAAGEE LPEEDP NPIFKPIPEPSRLDS+LI NQIANYCNQINGV+GQ+F
Sbjct: 270 KRRSENMSRKAAGEEPLPEEDPLNPIFKPIPEPSRLDSFLITNQIANYCNQINGVSGQSF 329

Query: 90  SRLYLMKALHEN 55
           SRLYLMKALHEN
Sbjct: 330 SRLYLMKALHEN 341


>ref|XP_004152102.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           H-like [Cucumis sativus]
           gi|449521699|ref|XP_004167867.1| PREDICTED: eukaryotic
           translation initiation factor 3 subunit H-like [Cucumis
           sativus]
          Length = 337

 Score =  552 bits (1422), Expect = e-155
 Identities = 266/312 (85%), Positives = 289/312 (92%)
 Frame = -3

Query: 990 QMEGLAVLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIREDDEEIEADGANYQ 811
           Q+EGL +LKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFP RE+DEEIEADGANYQ
Sbjct: 26  QIEGLVILKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPTREEDEEIEADGANYQ 85

Query: 810 LEMMRCLREVNVDNNTVGWYQSTLMGLYQTVELIETFMNYQENIRRCVCIIYDPSKSNQG 631
           LEMMRCLREVNVDNNTVGWYQST +G YQTVELIETFMNYQENIRRCVCIIYDPS+SNQG
Sbjct: 86  LEMMRCLREVNVDNNTVGWYQSTFLGSYQTVELIETFMNYQENIRRCVCIIYDPSRSNQG 145

Query: 630 VLALKALKLSDSFMELYRNNEFNGEKLREKKVTWVDIFEEIPIKVSNSALISAFMTELEP 451
           VLALKALKLSDSFMELYR N F GEKLREK ++WVDIFEEIPIKVSNSALISAFMTELE 
Sbjct: 146 VLALKALKLSDSFMELYRTNSFTGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELES 205

Query: 450 DSPVAQCDFDRLQLSTSSFMERNLEFMIECMEDLSAEQNKFQYYYRNVSRXXXXXXAWLQ 271
           DSPV QCD+DRLQLST+ FMERN+EF+IECM+DLS EQ KFQ+YYR+++R      +WLQ
Sbjct: 206 DSPVTQCDYDRLQLSTNPFMERNVEFLIECMDDLSVEQQKFQFYYRSLTRQQAQQQSWLQ 265

Query: 270 KRRTENMARKAAGEELLPEEDPSNPIFKPIPEPSRLDSYLINNQIANYCNQINGVAGQNF 91
           KRR ENM RKAAGEE LPEEDP+NPIFKP+PEPSRLDSYLI NQIANYCNQINGVAGQ+F
Sbjct: 266 KRRAENMTRKAAGEEPLPEEDPTNPIFKPLPEPSRLDSYLITNQIANYCNQINGVAGQSF 325

Query: 90  SRLYLMKALHEN 55
           +RL+LMKALH+N
Sbjct: 326 NRLHLMKALHDN 337


>ref|NP_001052582.1| Os04g0376500 [Oryza sativa Japonica Group]
           gi|38346118|emb|CAE04596.2| OSJNBb0006N15.13 [Oryza
           sativa Japonica Group] gi|113564153|dbj|BAF14496.1|
           Os04g0376500 [Oryza sativa Japonica Group]
           gi|125590097|gb|EAZ30447.1| hypothetical protein
           OsJ_14495 [Oryza sativa Japonica Group]
           gi|215737293|dbj|BAG96222.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218194711|gb|EEC77138.1| hypothetical protein
           OsI_15576 [Oryza sativa Indica Group]
          Length = 347

 Score =  551 bits (1419), Expect = e-154
 Identities = 266/312 (85%), Positives = 292/312 (93%)
 Frame = -3

Query: 990 QMEGLAVLKIIKHCKEFSPALVTGQLLGLDVGSVLEVTNCFPFPIREDDEEIEADGANYQ 811
           QMEGLAVLKIIKHC+EF+PALVTGQLLGLDVGSVLEVTNCFPFP+REDDEE +ADGANYQ
Sbjct: 36  QMEGLAVLKIIKHCEEFAPALVTGQLLGLDVGSVLEVTNCFPFPMREDDEEADADGANYQ 95

Query: 810 LEMMRCLREVNVDNNTVGWYQSTLMGLYQTVELIETFMNYQENIRRCVCIIYDPSKSNQG 631
           LEMMRCLREVNVDNNTVGWYQS L+G +QTVELIETFMNYQENIRRCVCI+YDPS+SNQG
Sbjct: 96  LEMMRCLREVNVDNNTVGWYQSCLLGSFQTVELIETFMNYQENIRRCVCIVYDPSRSNQG 155

Query: 630 VLALKALKLSDSFMELYRNNEFNGEKLREKKVTWVDIFEEIPIKVSNSALISAFMTELEP 451
           VLALKALKL+DSFM+LYRNN   GEKLREKK++WVDIFEEIPIKVSNSAL+SAFMTELEP
Sbjct: 156 VLALKALKLTDSFMDLYRNNGLTGEKLREKKLSWVDIFEEIPIKVSNSALVSAFMTELEP 215

Query: 450 DSPVAQCDFDRLQLSTSSFMERNLEFMIECMEDLSAEQNKFQYYYRNVSRXXXXXXAWLQ 271
           +SPV+QCDFDRL+LST+ FMERNLEF+I CM+DLS+EQNKFQYYYRNVSR      AWLQ
Sbjct: 216 ESPVSQCDFDRLKLSTAPFMERNLEFLIGCMDDLSSEQNKFQYYYRNVSRQQSQQQAWLQ 275

Query: 270 KRRTENMARKAAGEELLPEEDPSNPIFKPIPEPSRLDSYLINNQIANYCNQINGVAGQNF 91
           KRR ENMARKAAGEE LPEEDPSNPIFKPIPEPSRL+ YL+ NQI++YCN INGVAGQNF
Sbjct: 276 KRRQENMARKAAGEEPLPEEDPSNPIFKPIPEPSRLEGYLVTNQISSYCNHINGVAGQNF 335

Query: 90  SRLYLMKALHEN 55
           +RLYLMKAL E+
Sbjct: 336 NRLYLMKALQED 347


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