BLASTX nr result

ID: Dioscorea21_contig00003945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003945
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|2...   178   4e-43
gb|ABK92468.1| unknown [Populus trichocarpa]                          178   4e-43
ref|XP_002447648.1| hypothetical protein SORBIDRAFT_06g011300 [S...   175   3e-42
ref|XP_002301647.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation...   174   5e-42

>ref|XP_002320437.1| predicted protein [Populus trichocarpa] gi|222861210|gb|EEE98752.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  178 bits (452), Expect = 4e-43
 Identities = 84/96 (87%), Positives = 91/96 (94%)
 Frame = -2

Query: 352 EQNKFQYHYRNVSRQQAQQQTWLQKRRTENMARKAAGEELLPEEDPSNPIFKPIPEPSRL 173
           EQ KFQY+YRN+SRQQAQQQ WLQKRR+ENM+RKAAGEE LPEEDP NPIFKPIPEPSRL
Sbjct: 238 EQQKFQYYYRNLSRQQAQQQAWLQKRRSENMSRKAAGEEPLPEEDPLNPIFKPIPEPSRL 297

Query: 172 DSYLINNQIANYCNQINGVAGQNFSRLYLMKALHEN 65
           DS+LI NQIANYCNQINGV+GQ+FSRLYLMKALHEN
Sbjct: 298 DSFLITNQIANYCNQINGVSGQSFSRLYLMKALHEN 333


>gb|ABK92468.1| unknown [Populus trichocarpa]
          Length = 341

 Score =  178 bits (452), Expect = 4e-43
 Identities = 84/96 (87%), Positives = 91/96 (94%)
 Frame = -2

Query: 352 EQNKFQYHYRNVSRQQAQQQTWLQKRRTENMARKAAGEELLPEEDPSNPIFKPIPEPSRL 173
           EQ KFQY+YRN+SRQQAQQQ WLQKRR+ENM+RKAAGEE LPEEDP NPIFKPIPEPSRL
Sbjct: 246 EQQKFQYYYRNLSRQQAQQQAWLQKRRSENMSRKAAGEEPLPEEDPLNPIFKPIPEPSRL 305

Query: 172 DSYLINNQIANYCNQINGVAGQNFSRLYLMKALHEN 65
           DS+LI NQIANYCNQINGV+GQ+FSRLYLMKALHEN
Sbjct: 306 DSFLITNQIANYCNQINGVSGQSFSRLYLMKALHEN 341


>ref|XP_002447648.1| hypothetical protein SORBIDRAFT_06g011300 [Sorghum bicolor]
           gi|241938831|gb|EES11976.1| hypothetical protein
           SORBIDRAFT_06g011300 [Sorghum bicolor]
          Length = 342

 Score =  175 bits (444), Expect = 3e-42
 Identities = 81/96 (84%), Positives = 90/96 (93%)
 Frame = -2

Query: 352 EQNKFQYHYRNVSRQQAQQQTWLQKRRTENMARKAAGEELLPEEDPSNPIFKPIPEPSRL 173
           EQNKFQY+YRN+SRQQ+QQQ WLQKRR ENMARKAAGEE LPEEDPSNPIFKPIPEPSRL
Sbjct: 247 EQNKFQYYYRNLSRQQSQQQAWLQKRRQENMARKAAGEEPLPEEDPSNPIFKPIPEPSRL 306

Query: 172 DSYLINNQIANYCNQINGVAGQNFSRLYLMKALHEN 65
           + YL+ NQI++YCN INGVAGQNF+RLYLMKALHE+
Sbjct: 307 EGYLVTNQISSYCNHINGVAGQNFNRLYLMKALHED 342


>ref|XP_002301647.1| predicted protein [Populus trichocarpa] gi|222843373|gb|EEE80920.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  175 bits (444), Expect = 3e-42
 Identities = 82/96 (85%), Positives = 90/96 (93%)
 Frame = -2

Query: 352 EQNKFQYHYRNVSRQQAQQQTWLQKRRTENMARKAAGEELLPEEDPSNPIFKPIPEPSRL 173
           EQ KFQYHYRN+SRQQAQQQ WLQKRR+ENM RKAAGEE LPEEDPSNPIFKPIPEPSRL
Sbjct: 245 EQQKFQYHYRNLSRQQAQQQAWLQKRRSENMTRKAAGEEPLPEEDPSNPIFKPIPEPSRL 304

Query: 172 DSYLINNQIANYCNQINGVAGQNFSRLYLMKALHEN 65
            S+LI NQ+ANYCNQINGV+GQ+FSRLYLMKALH++
Sbjct: 305 GSFLITNQMANYCNQINGVSGQSFSRLYLMKALHKD 340


>ref|XP_002266909.1| PREDICTED: eukaryotic translation initiation factor 3 subunit H
           [Vitis vinifera] gi|296089621|emb|CBI39440.3| unnamed
           protein product [Vitis vinifera]
          Length = 337

 Score =  174 bits (442), Expect = 5e-42
 Identities = 81/96 (84%), Positives = 89/96 (92%)
 Frame = -2

Query: 352 EQNKFQYHYRNVSRQQAQQQTWLQKRRTENMARKAAGEELLPEEDPSNPIFKPIPEPSRL 173
           EQ KFQ++YRN+SRQQ QQQ WLQKRR ENMARK AGE+ LPEEDP+NPIFKPIPEPSRL
Sbjct: 242 EQQKFQFYYRNLSRQQGQQQAWLQKRRAENMARKTAGEDPLPEEDPANPIFKPIPEPSRL 301

Query: 172 DSYLINNQIANYCNQINGVAGQNFSRLYLMKALHEN 65
           DS+LI NQI+NYCNQINGVAGQ+FSRLYLMKALHEN
Sbjct: 302 DSFLITNQISNYCNQINGVAGQSFSRLYLMKALHEN 337


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