BLASTX nr result

ID: Dioscorea21_contig00003927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003927
         (698 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617941.1| 40S ribosomal protein [Medicago truncatula] ...    98   1e-18
emb|CBI25376.3| unnamed protein product [Vitis vinifera]               96   5e-18
ref|XP_002319327.1| predicted protein [Populus trichocarpa] gi|1...    96   7e-18
gb|AEO35306.1| hypothetical protein [Amblyomma maculatum]              95   1e-17
ref|XP_004158964.1| PREDICTED: 40S ribosomal protein S26-1-like ...    95   2e-17

>ref|XP_003617941.1| 40S ribosomal protein [Medicago truncatula]
           gi|355519276|gb|AET00900.1| 40S ribosomal protein
           [Medicago truncatula]
          Length = 230

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 48/65 (73%), Positives = 48/65 (73%)
 Frame = +1

Query: 49  RAKAAMTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQE 228
           RA   MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQE
Sbjct: 96  RASTTMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQE 155

Query: 229 ACVYD 243
           ACVYD
Sbjct: 156 ACVYD 160


>emb|CBI25376.3| unnamed protein product [Vitis vinifera]
          Length = 150

 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 47/65 (72%), Positives = 48/65 (73%)
 Frame = +1

Query: 49  RAKAAMTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQE 228
           R+   MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQE
Sbjct: 22  RSLTVMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQE 81

Query: 229 ACVYD 243
           ACVYD
Sbjct: 82  ACVYD 86


>ref|XP_002319327.1| predicted protein [Populus trichocarpa] gi|118485484|gb|ABK94597.1|
           unknown [Populus trichocarpa]
           gi|222857703|gb|EEE95250.1| predicted protein [Populus
           trichocarpa]
          Length = 131

 Score = 95.9 bits (237), Expect = 7e-18
 Identities = 46/61 (75%), Positives = 47/61 (77%)
 Frame = +1

Query: 64  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 243
           MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQE+CVYD
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQESCVYD 60

Query: 244 G 246
           G
Sbjct: 61  G 61


>gb|AEO35306.1| hypothetical protein [Amblyomma maculatum]
          Length = 125

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 46/61 (75%), Positives = 46/61 (75%)
 Frame = +1

Query: 64  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 243
           MTF              V FIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD
Sbjct: 1   MTFKRRNGGRNKHGRGHVNFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 244 G 246
           G
Sbjct: 61  G 61


>ref|XP_004158964.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 46/60 (76%), Positives = 46/60 (76%)
 Frame = +1

Query: 64  MTFXXXXXXXXXXXXXXVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 243
           MTF              VKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60


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