BLASTX nr result
ID: Dioscorea21_contig00003926
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00003926
(445 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003576026.1| PREDICTED: pollen-specific protein SF3-like ... 120 8e-39
gb|ABA99040.1| Pollen-specific protein SF3, putative, expressed ... 118 1e-38
ref|XP_002442217.1| hypothetical protein SORBIDRAFT_08g016450 [S... 118 1e-38
gb|ACG33608.1| pollen-specific protein SF3 [Zea mays] gi|1956455... 116 5e-38
ref|NP_001148027.1| pollen-specific protein SF3 [Zea mays] gi|19... 116 7e-38
>ref|XP_003576026.1| PREDICTED: pollen-specific protein SF3-like [Brachypodium
distachyon]
Length = 196
Score = 120 bits (302), Expect(2) = 8e-39
Identities = 56/66 (84%), Positives = 59/66 (89%)
Frame = -3
Query: 443 GTPKVVKPERHIENENIAAKVSSSFAGTREKCVGCKKTVYPIERVTVNGTCYHKSCFKCS 264
GTPKVVKPER++ENEN A KVSS+FAGTREKCVGC KTVYPIERVTVN T YHKSCFKC
Sbjct: 80 GTPKVVKPERNVENEN-AIKVSSAFAGTREKCVGCNKTVYPIERVTVNNTMYHKSCFKCC 138
Query: 263 HGGCVI 246
HGGC I
Sbjct: 139 HGGCTI 144
Score = 64.7 bits (156), Expect(2) = 8e-39
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = -2
Query: 156 NYIAHEGRLYCKHHHIQLIKEKGNYSQLEGGENEKIS 46
NYIAHEG+L+CKHHHIQLIKEKGN+SQLE ++EK S
Sbjct: 148 NYIAHEGKLFCKHHHIQLIKEKGNFSQLE-NDSEKTS 183
Score = 52.4 bits (124), Expect(2) = 1e-07
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = -3
Query: 383 VSSSFAGTREKCVGCKKTVYPIERVTVNGTCYHKSCFKCSH 261
+++SF GT KC C KTVY ++++T + YHK+CF+C H
Sbjct: 1 MATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHH 41
Score = 28.5 bits (62), Expect(2) = 1e-07
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 156 NYIAHEGRLYCKHHHIQLIKEKGN 85
NY + EG LYC+ H QL K G+
Sbjct: 50 NYNSFEGVLYCRPHFDQLFKRTGS 73
>gb|ABA99040.1| Pollen-specific protein SF3, putative, expressed [Oryza sativa
Japonica Group] gi|125579493|gb|EAZ20639.1| hypothetical
protein OsJ_36255 [Oryza sativa Japonica Group]
Length = 195
Score = 118 bits (296), Expect(2) = 1e-38
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = -3
Query: 443 GTPKVVKPERHIENENIAAKVSSSFAGTREKCVGCKKTVYPIERVTVNGTCYHKSCFKCS 264
GTPKVVKPE+ +ENEN A KVSS+FAGTREKCVGC KTVYPIERVTVN T YHKSCFKC
Sbjct: 80 GTPKVVKPEKTVENEN-AIKVSSAFAGTREKCVGCNKTVYPIERVTVNNTMYHKSCFKCC 138
Query: 263 HGGCVI 246
HGGC I
Sbjct: 139 HGGCTI 144
Score = 66.2 bits (160), Expect(2) = 1e-38
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -2
Query: 156 NYIAHEGRLYCKHHHIQLIKEKGNYSQLEGGENEKIS 46
NYIAHEG+LYCKHHHIQLIKEKGN+SQLE ++EK S
Sbjct: 148 NYIAHEGKLYCKHHHIQLIKEKGNFSQLE-NDHEKAS 183
Score = 53.9 bits (128), Expect(2) = 4e-08
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = -3
Query: 383 VSSSFAGTREKCVGCKKTVYPIERVTVNGTCYHKSCFKCSH 261
+++SF GT KC+ C KTVY ++++T + YHK+CF+C H
Sbjct: 1 MATSFQGTTTKCMACDKTVYLVDKLTADNRVYHKACFRCHH 41
Score = 28.5 bits (62), Expect(2) = 4e-08
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 156 NYIAHEGRLYCKHHHIQLIKEKGN 85
NY + EG LYC+ H QL K G+
Sbjct: 50 NYNSFEGVLYCRPHFDQLFKRTGS 73
>ref|XP_002442217.1| hypothetical protein SORBIDRAFT_08g016450 [Sorghum bicolor]
gi|241942910|gb|EES16055.1| hypothetical protein
SORBIDRAFT_08g016450 [Sorghum bicolor]
Length = 194
Score = 118 bits (296), Expect(2) = 1e-38
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = -3
Query: 443 GTPKVVKPERHIENENIAAKVSSSFAGTREKCVGCKKTVYPIERVTVNGTCYHKSCFKCS 264
GTPKVVKPER++ NEN A KVSS+FAGTREKCVGC KTVYPIERVTVN T YHKSCFKC
Sbjct: 80 GTPKVVKPERNVGNEN-AVKVSSAFAGTREKCVGCSKTVYPIERVTVNNTMYHKSCFKCC 138
Query: 263 HGGCVI 246
HGGC I
Sbjct: 139 HGGCTI 144
Score = 66.2 bits (160), Expect(2) = 1e-38
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -2
Query: 156 NYIAHEGRLYCKHHHIQLIKEKGNYSQLEGGENEKIS 46
NYIAHEG+LYCKHHHIQLIKEKGN+SQLE ++EK S
Sbjct: 148 NYIAHEGKLYCKHHHIQLIKEKGNFSQLE-NDHEKTS 183
Score = 53.5 bits (127), Expect(2) = 5e-08
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = -3
Query: 383 VSSSFAGTREKCVGCKKTVYPIERVTVNGTCYHKSCFKCSH 261
+++SF GT KC C KTVY ++++T + YHK+CF+C H
Sbjct: 1 MATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHH 41
Score = 28.5 bits (62), Expect(2) = 5e-08
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 156 NYIAHEGRLYCKHHHIQLIKEKGN 85
NY + EG LYC+ H QL K G+
Sbjct: 50 NYNSFEGVLYCRPHFDQLFKRTGS 73
>gb|ACG33608.1| pollen-specific protein SF3 [Zea mays] gi|195645500|gb|ACG42218.1|
pollen-specific protein SF3 [Zea mays]
gi|195654645|gb|ACG46790.1| pollen-specific protein SF3
[Zea mays] gi|195656225|gb|ACG47580.1| pollen-specific
protein SF3 [Zea mays] gi|219887333|gb|ACL54041.1|
unknown [Zea mays] gi|413942014|gb|AFW74663.1| putative
LIM-type zinc finger domain family protein [Zea mays]
Length = 195
Score = 116 bits (291), Expect(2) = 5e-38
Identities = 54/66 (81%), Positives = 57/66 (86%)
Frame = -3
Query: 443 GTPKVVKPERHIENENIAAKVSSSFAGTREKCVGCKKTVYPIERVTVNGTCYHKSCFKCS 264
GTPKVVKPER++ NEN A KVSS+FAGTREKCVGC KTVYP ERVTVN T YHKSCFKC
Sbjct: 80 GTPKVVKPERNVGNEN-ATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCC 138
Query: 263 HGGCVI 246
HGGC I
Sbjct: 139 HGGCTI 144
Score = 66.2 bits (160), Expect(2) = 5e-38
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = -2
Query: 156 NYIAHEGRLYCKHHHIQLIKEKGNYSQLEGGENEKIS 46
NYIAHEG+LYCKHHHIQLIKEKGN+SQLE ++EK S
Sbjct: 148 NYIAHEGKLYCKHHHIQLIKEKGNFSQLE-NDHEKTS 183
Score = 53.5 bits (127), Expect(2) = 5e-08
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = -3
Query: 383 VSSSFAGTREKCVGCKKTVYPIERVTVNGTCYHKSCFKCSH 261
+++SF GT KC C KTVY ++++T + YHK+CF+C H
Sbjct: 1 MATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHH 41
Score = 28.5 bits (62), Expect(2) = 5e-08
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 156 NYIAHEGRLYCKHHHIQLIKEKGN 85
NY + EG LYC+ H QL K G+
Sbjct: 50 NYNSFEGVLYCRPHFDQLFKRTGS 73
>ref|NP_001148027.1| pollen-specific protein SF3 [Zea mays] gi|195615328|gb|ACG29494.1|
pollen-specific protein SF3 [Zea mays]
gi|414878239|tpg|DAA55370.1| TPA: putative LIM-type zinc
finger domain family protein [Zea mays]
Length = 196
Score = 116 bits (291), Expect(2) = 7e-38
Identities = 54/66 (81%), Positives = 57/66 (86%)
Frame = -3
Query: 443 GTPKVVKPERHIENENIAAKVSSSFAGTREKCVGCKKTVYPIERVTVNGTCYHKSCFKCS 264
GTPKVVKPER++ NEN A KVSS+FAGTREKCVGC KTVYPIERVTVN T YHK CFKC
Sbjct: 80 GTPKVVKPERNVGNEN-ATKVSSAFAGTREKCVGCSKTVYPIERVTVNNTMYHKCCFKCC 138
Query: 263 HGGCVI 246
HGGC I
Sbjct: 139 HGGCTI 144
Score = 65.9 bits (159), Expect(2) = 7e-38
Identities = 29/37 (78%), Positives = 34/37 (91%)
Frame = -2
Query: 156 NYIAHEGRLYCKHHHIQLIKEKGNYSQLEGGENEKIS 46
NYIAHEG+LYCKHHH+QLIKEKGN+SQLE ++EK S
Sbjct: 148 NYIAHEGKLYCKHHHVQLIKEKGNFSQLE-NDHEKTS 183
Score = 53.5 bits (127), Expect(2) = 1e-07
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = -3
Query: 383 VSSSFAGTREKCVGCKKTVYPIERVTVNGTCYHKSCFKCSH 261
+++SF GT KC C KTVY ++++T + YHK+CF+C H
Sbjct: 1 MATSFQGTTTKCTACDKTVYLVDKLTADNRVYHKACFRCHH 41
Score = 27.3 bits (59), Expect(2) = 1e-07
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 156 NYIAHEGRLYCKHHHIQLIKEKGN 85
NY + +G LYC+ H QL K G+
Sbjct: 50 NYNSFDGVLYCRPHFDQLFKRTGS 73