BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003913
         (1626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37185.3| unnamed protein product [Vitis vinifera]              445   e-123
ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-lik...   430   e-118
ref|NP_001184905.1| pre-mRNA-processing factor 39 [Arabidopsis t...   423   e-116
gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]                412   e-112
ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative ...   411   e-112

>emb|CBI37185.3| unnamed protein product [Vitis vinifera]
          Length = 432

 Score =  445 bits (1144), Expect(2) = e-123
 Identities = 230/362 (63%), Positives = 272/362 (75%), Gaps = 3/362 (0%)
 Frame = +3

Query: 324  CLSTYTSIYKARMVPPS--IEGPP*SATGVVKLYERCLIACASYPEYWIRYVLCMEASGS 497
            CL  + +I  +    PS  IEGPP S  GVVKLYERCLIACA+YPEYWIRYVLCMEASGS
Sbjct: 14   CLLIFLTICLSGKEGPSFRIEGPPCSFNGVVKLYERCLIACANYPEYWIRYVLCMEASGS 73

Query: 498  MELANNALARATQVFVKRQPEIHLFAARFKEFSGDIAGARAEYQVVYTEITPCYLEAIVK 677
            M+LANNALARATQVFVKRQPEIHLFAARF+E  GDI G+RA YQ+V+TEI+P  LEAI+K
Sbjct: 74   MDLANNALARATQVFVKRQPEIHLFAARFREQKGDIPGSRAAYQLVHTEISPGLLEAIIK 133

Query: 678  HANMEYRLGFKXXXXXXXXXXXXXXXXKEHSQILPMLLVQYSRFLFLVAGNAEKAREVLA 857
            HANME+RLG                  KEHSQ LPML  QYSRFL+LV GN EKARE+L 
Sbjct: 134  HANMEHRLGNLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFLYLVTGNTEKAREILV 193

Query: 858  GAHENVQLSKHFLEAVIHLESIQPSPKRVEYLDSLVEKYIVPNPESPSLAITSDREELSS 1037
             A E+VQLSK  LEA+IHLESIQ  PKR+++LDSLV+K+I  NPESP+ A  ++REELSS
Sbjct: 194  EALEHVQLSKPLLEALIHLESIQSLPKRIDHLDSLVDKFIHTNPESPNAASAAEREELSS 253

Query: 1038 IYLEFLDLFGDAQSIKKAENRHSMLFLRQKGLSVSKKRHADDFLSSDRAKIAKTYANASS 1217
            I+LEFLDLFGDAQSIKKA++RH+ LFL  +  S  KKRHA+DFL+SD+AK+AK+Y+   S
Sbjct: 254  IFLEFLDLFGDAQSIKKADDRHAKLFLHHRSTSELKKRHAEDFLASDKAKLAKSYSGVPS 313

Query: 1218 PGHSGVGAYPNAQTQWPAGYGQKAQAWPXXXXXXXXXXXWNPAYAPQAGYSAYGGY-PNY 1394
            P  S +GAYP+AQ QW +GYG + QAWP           WNP Y  QA Y+AY GY  +Y
Sbjct: 314  PAQSLMGAYPSAQNQWASGYGLQPQAWP--QATQAQGQQWNPGYTQQAAYNAYSGYGSSY 371

Query: 1395 SH 1400
            +H
Sbjct: 372  TH 373



 Score = 26.2 bits (56), Expect(2) = e-123
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +2

Query: 203 VSLRLSTTNPHLSL 244
           +S+RLST+NPHL L
Sbjct: 2   ISIRLSTSNPHLCL 15


>ref|XP_002272685.1| PREDICTED: pre-mRNA-processing factor 39-like [Vitis vinifera]
          Length = 832

 Score =  430 bits (1106), Expect = e-118
 Identities = 218/333 (65%), Positives = 257/333 (77%), Gaps = 1/333 (0%)
 Frame = +3

Query: 405  VVKLYERCLIACASYPEYWIRYVLCMEASGSMELANNALARATQVFVKRQPEIHLFAARF 584
            VVKLYERCLIACA+YPEYWIRYVLCMEASGSM+LANNALARATQVFVKRQPEIHLFAARF
Sbjct: 443  VVKLYERCLIACANYPEYWIRYVLCMEASGSMDLANNALARATQVFVKRQPEIHLFAARF 502

Query: 585  KEFSGDIAGARAEYQVVYTEITPCYLEAIVKHANMEYRLGFKXXXXXXXXXXXXXXXXKE 764
            +E  GDI G+RA YQ+V+TEI+P  LEAI+KHANME+RLG                  KE
Sbjct: 503  REQKGDIPGSRAAYQLVHTEISPGLLEAIIKHANMEHRLGNLEDAFSLYEQAIAIEKGKE 562

Query: 765  HSQILPMLLVQYSRFLFLVAGNAEKAREVLAGAHENVQLSKHFLEAVIHLESIQPSPKRV 944
            HSQ LPML  QYSRFL+LV GN EKARE+L  A E+VQLSK  LEA+IHLESIQ  PKR+
Sbjct: 563  HSQTLPMLFAQYSRFLYLVTGNTEKAREILVEALEHVQLSKPLLEALIHLESIQSLPKRI 622

Query: 945  EYLDSLVEKYIVPNPESPSLAITSDREELSSIYLEFLDLFGDAQSIKKAENRHSMLFLRQ 1124
            ++LDSLV+K+I  NPESP+ A  ++REELSSI+LEFLDLFGDAQSIKKA++RH+ LFL  
Sbjct: 623  DHLDSLVDKFIHTNPESPNAASAAEREELSSIFLEFLDLFGDAQSIKKADDRHAKLFLHH 682

Query: 1125 KGLSVSKKRHADDFLSSDRAKIAKTYANASSPGHSGVGAYPNAQTQWPAGYGQKAQAWPX 1304
            +  S  KKRHA+DFL+SD+AK+AK+Y+   SP  S +GAYP+AQ QW +GYG + QAWP 
Sbjct: 683  RSTSELKKRHAEDFLASDKAKLAKSYSGVPSPAQSLMGAYPSAQNQWASGYGLQPQAWP- 741

Query: 1305 XXXXXXXXXXWNPAYAPQAGYSAYGGY-PNYSH 1400
                      WNP Y  QA Y+AY GY  +Y+H
Sbjct: 742  -QATQAQGQQWNPGYTQQAAYNAYSGYGSSYTH 773



 Score = 72.0 bits (175), Expect = 4e-10
 Identities = 33/58 (56%), Positives = 39/58 (67%), Gaps = 15/58 (25%)
 Frame = +3

Query: 3   IRRPYFHVRPLDDPELDNWHNYLDFIERGDDFNKL---------------SHWLHYML 131
           IRRPYFHVRPL+  EL+NWHNYLDFIERGDDFNK+                +W+ Y+L
Sbjct: 409 IRRPYFHVRPLNVAELENWHNYLDFIERGDDFNKVVKLYERCLIACANYPEYWIRYVL 466


>ref|NP_001184905.1| pre-mRNA-processing factor 39 [Arabidopsis thaliana]
            gi|332189533|gb|AEE27654.1| pre-mRNA-processing factor 39
            [Arabidopsis thaliana]
          Length = 823

 Score =  423 bits (1087), Expect = e-116
 Identities = 235/463 (50%), Positives = 292/463 (63%), Gaps = 1/463 (0%)
 Frame = +3

Query: 3    IRRPYFHVRPLDDPELDNWHNYLDFIERGDDFNKLSH-WLHYML*WLKRSLKLPCKMGY* 179
            IRRPYFHVRPL+  EL+NWHNYLDFIER  DFNKLS  W             + C +G+ 
Sbjct: 346  IRRPYFHVRPLNVAELENWHNYLDFIERDGDFNKLSSIWC------------IICLIGF- 392

Query: 180  SEDKATVLFL*G*VLQTLICHWTFWVHDVLVIAFVLKIRISYMQVFGYCLSTYTSIYKAR 359
              D+AT  +    + +T  C            A +    I+      +CLS         
Sbjct: 393  PLDQATFKWE---ITETKAC------------ASICSNVINAGVFLTFCLS--------- 428

Query: 360  MVPPSIEGPP*SATGVVKLYERCLIACASYPEYWIRYVLCMEASGSMELANNALARATQV 539
                  EGP      VVKLYERC++ CA+YPEYWIRYV  MEASGS +LA NALARATQV
Sbjct: 429  ----GKEGP-----SVVKLYERCVVTCANYPEYWIRYVTNMEASGSADLAENALARATQV 479

Query: 540  FVKRQPEIHLFAARFKEFSGDIAGARAEYQVVYTEITPCYLEAIVKHANMEYRLGFKXXX 719
            FVK+QPEIHLFAAR KE +GDIAGARA YQ+V++EI+P  LEA++KHANMEYRLG     
Sbjct: 480  FVKKQPEIHLFAARLKEQNGDIAGARAAYQLVHSEISPGLLEAVIKHANMEYRLGNLDDA 539

Query: 720  XXXXXXXXXXXXXKEHSQILPMLLVQYSRFLFLVAGNAEKAREVLAGAHENVQLSKHFLE 899
                         KEHS ILP+L  QYSRF +LV+ +AEKAR ++  A ++VQ SK  +E
Sbjct: 540  FSLYEQVIAVEKGKEHSTILPLLYAQYSRFSYLVSRDAEKARRIIVEALDHVQPSKPLME 599

Query: 900  AVIHLESIQPSPKRVEYLDSLVEKYIVPNPESPSLAITSDREELSSIYLEFLDLFGDAQS 1079
            A+IH E+IQP P+ ++YL+ LVEK I P+ ++ ++A +++REELS IY+EFL +FGD +S
Sbjct: 600  ALIHFEAIQPPPREIDYLEPLVEKVIKPDADAQNIASSTEREELSLIYIEFLGIFGDVKS 659

Query: 1080 IKKAENRHSMLFLRQKGLSVSKKRHADDFLSSDRAKIAKTYANASSPGHSGVGAYPNAQT 1259
            IKKAE++H  LF   +  S  KKR ADDFL+SDR K+AKTY N + P      AYPNAQ 
Sbjct: 660  IKKAEDQHVKLFYPHRSTSELKKRSADDFLASDRTKMAKTY-NGTPPAQPVSNAYPNAQA 718

Query: 1260 QWPAGYGQKAQAWPXXXXXXXXXXXWNPAYAPQAGYSAYGGYP 1388
            QW  GY  + Q WP           WNPAY  QA Y AYGGYP
Sbjct: 719  QWSGGYAAQPQTWPPAQAAPAQPQQWNPAYGQQAAYGAYGGYP 761


>gb|AEF01213.1| PRP39 [x Doritaenopsis hybrid cultivar]
          Length = 823

 Score =  412 bits (1059), Expect = e-112
 Identities = 212/330 (64%), Positives = 252/330 (76%)
 Frame = +3

Query: 405  VVKLYERCLIACASYPEYWIRYVLCMEASGSMELANNALARATQVFVKRQPEIHLFAARF 584
            VVKLYERCLIACA+YPEYWIRYVLCMEASGSMELA NALARATQVFVK+QPEIHLFAARF
Sbjct: 437  VVKLYERCLIACANYPEYWIRYVLCMEASGSMELAINALARATQVFVKKQPEIHLFAARF 496

Query: 585  KEFSGDIAGARAEYQVVYTEITPCYLEAIVKHANMEYRLGFKXXXXXXXXXXXXXXXXKE 764
            KE SGDI GAR+EY+++Y EI+P +LEAI++H NMEYRLG K                K+
Sbjct: 497  KEHSGDILGARSEYELLYAEISPGFLEAILRHVNMEYRLGNKEDALSIYEKAIAAEQEKD 556

Query: 765  HSQILPMLLVQYSRFLFLVAGNAEKAREVLAGAHENVQLSKHFLEAVIHLESIQPSPKRV 944
             SQILPMLL+ YSRFL+LVAGNAEKAR++ +GA EN +LSK  LEA IHLESI P PKR+
Sbjct: 557  QSQILPMLLILYSRFLYLVAGNAEKARDIFSGALENTELSKPILEAAIHLESILPFPKRI 616

Query: 945  EYLDSLVEKYIVPNPESPSLAITSDREELSSIYLEFLDLFGDAQSIKKAENRHSMLFLRQ 1124
            EY+D LVEK+I PN  +  +A  +DRE++S I+LEFLDLFGD  SIKKAE+RH++LFLRQ
Sbjct: 617  EYIDLLVEKFITPNTNN-CMASPTDREDISYIFLEFLDLFGDPHSIKKAEDRHALLFLRQ 675

Query: 1125 KGLSVSKKRHADDFLSSDRAKIAKTYANASSPGHSGVGAYPNAQTQWPAGYGQKAQAWPX 1304
            K + VSKKR A+DFL+S++AKIAK   +A  P  S +GAYP++Q QWP GY QK  +WP 
Sbjct: 676  KSVLVSKKRRANDFLASEKAKIAK---SAPMPAQSVMGAYPSSQNQWPVGYEQKVPSWP- 731

Query: 1305 XXXXXXXXXXWNPAYAPQAGYSAYGGYPNY 1394
                      WNP Y  QAGY AY  Y +Y
Sbjct: 732  QGNPQTQGQPWNPGYPSQAGYGAY-SYASY 760



 Score = 78.6 bits (192), Expect = 5e-12
 Identities = 35/58 (60%), Positives = 40/58 (68%), Gaps = 15/58 (25%)
 Frame = +3

Query: 3   IRRPYFHVRPLDDPELDNWHNYLDFIERGDDFNKL---------------SHWLHYML 131
           IRRPYFHVRPLDDPEL+NWHNYLDF ERGDDFNK+                +W+ Y+L
Sbjct: 403 IRRPYFHVRPLDDPELENWHNYLDFTERGDDFNKVVKLYERCLIACANYPEYWIRYVL 460


>ref|XP_002526546.1| Pre-mRNA-processing protein prp39, putative [Ricinus communis]
            gi|223534107|gb|EEF35824.1| Pre-mRNA-processing protein
            prp39, putative [Ricinus communis]
          Length = 829

 Score =  411 bits (1056), Expect = e-112
 Identities = 206/327 (62%), Positives = 246/327 (75%)
 Frame = +3

Query: 405  VVKLYERCLIACASYPEYWIRYVLCMEASGSMELANNALARATQVFVKRQPEIHLFAARF 584
            VVKL+ERCLIACA+YPEYWIRY LCMEASGSM+LA+NALARATQVFVKR+PEIHLFAARF
Sbjct: 441  VVKLFERCLIACANYPEYWIRYTLCMEASGSMDLASNALARATQVFVKRRPEIHLFAARF 500

Query: 585  KEFSGDIAGARAEYQVVYTEITPCYLEAIVKHANMEYRLGFKXXXXXXXXXXXXXXXXKE 764
            +E +GD+ GARA YQ+V+TEI P   EA+VKHANME+RLG                  KE
Sbjct: 501  REQNGDVPGARAAYQLVHTEIAPGLFEAVVKHANMEHRLGNLKDACSLYEQAIAIEKGKE 560

Query: 765  HSQILPMLLVQYSRFLFLVAGNAEKAREVLAGAHENVQLSKHFLEAVIHLESIQPSPKRV 944
            HSQ+LPML  QY+RFL+LV+GN  KARE+L  A ENVQLSK  LEA IH+ESIQ  PKR+
Sbjct: 561  HSQVLPMLYAQYTRFLYLVSGNINKAREILVEALENVQLSKPLLEAFIHIESIQSLPKRI 620

Query: 945  EYLDSLVEKYIVPNPESPSLAITSDREELSSIYLEFLDLFGDAQSIKKAENRHSMLFLRQ 1124
            +YLDSLV+K+++PN +S S A  +DREELS I+LEFL +FGDAQSIKKA++RH+ LFL  
Sbjct: 621  DYLDSLVDKFVMPNSDSLSAASATDREELSCIFLEFLGMFGDAQSIKKADDRHAKLFLPH 680

Query: 1125 KGLSVSKKRHADDFLSSDRAKIAKTYANASSPGHSGVGAYPNAQTQWPAGYGQKAQAWPX 1304
            +  S  KKRHADD+L+SD++KIAK Y +A SP  S +GAYP+ Q QW AGYG + QAWP 
Sbjct: 681  RSKSEFKKRHADDYLTSDKSKIAKAYGDAPSPVQSLMGAYPSTQNQWAAGYGVQPQAWP- 739

Query: 1305 XXXXXXXXXXWNPAYAPQAGYSAYGGY 1385
                      W P Y  QA YS YG Y
Sbjct: 740  -PATQAQMQQWTPGYGQQAAYSTYGSY 765



 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +3

Query: 3   IRRPYFHVRPLDDPELDNWHNYLDFIERGDDFNKL 107
           IRRPYFHVRPL+  EL+NWHNYLDF+ER DD NK+
Sbjct: 407 IRRPYFHVRPLNVAELENWHNYLDFLEREDDLNKV 441