BLASTX nr result

ID: Dioscorea21_contig00003906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003906
         (569 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269008.1| PREDICTED: uncharacterized protein LOC100267...   214   6e-54
ref|XP_003532027.1| PREDICTED: uncharacterized protein LOC100499...   210   1e-52
ref|XP_003628665.1| LSM12-like protein [Medicago truncatula] gi|...   209   3e-52
ref|XP_004135229.1| PREDICTED: uncharacterized protein LOC101211...   209   3e-52
gb|AFK45434.1| unknown [Lotus japonicus]                              206   2e-51

>ref|XP_002269008.1| PREDICTED: uncharacterized protein LOC100267269 [Vitis vinifera]
          Length = 178

 Score =  214 bits (546), Expect = 6e-54
 Identities = 112/179 (62%), Positives = 130/179 (72%)
 Frame = +3

Query: 27  MEGSNGEELAVGCTLAIRTTLGDEIEGQIITFDRPSNFLVIQEGSSKVGSRRNLRLLKAN 206
           M+ S+G+E AVGC L+I+T+LGDE EGQIIT+DRPSN LV+QEGS   G RRN+RLLKAN
Sbjct: 1   MDASSGDEFAVGCILSIKTSLGDEFEGQIITYDRPSNILVLQEGSDS-GPRRNIRLLKAN 59

Query: 207 YIKDFTFLGREXXXXXXXXXXXXXGSXXXXXXXXXXXXXXXXXXXGVGVTTEAQSIFDAL 386
           YIK+F++LG+               +                   GVGVT EAQ+IFDAL
Sbjct: 60  YIKEFSYLGQAEDPLDPKKCCIDLNALQAREEVAIRQAEADAERIGVGVTVEAQNIFDAL 119

Query: 387 SKTLPVRWDKTVIVVMNEVRVHSPYLPENVNGGTPAANDRVKKVLELERKRLQARTPGQ 563
           SKTLPVRWDKT IVVMNEVRV SPYLPE+V+GGTPAAN+RVKKVLE ERKRLQAR  GQ
Sbjct: 120 SKTLPVRWDKTAIVVMNEVRVSSPYLPESVSGGTPAANERVKKVLEFERKRLQARVAGQ 178


>ref|XP_003532027.1| PREDICTED: uncharacterized protein LOC100499950 [Glycine max]
          Length = 186

 Score =  210 bits (535), Expect = 1e-52
 Identities = 116/175 (66%), Positives = 124/175 (70%)
 Frame = +3

Query: 36  SNGEELAVGCTLAIRTTLGDEIEGQIITFDRPSNFLVIQEGSSKVGSRRNLRLLKANYIK 215
           SN EELAVGC L+IRTTLGDE EGQ++TFDRPSN LV+QE  SK   RRNLRLLKANYIK
Sbjct: 11  SNPEELAVGCLLSIRTTLGDEFEGQVVTFDRPSNILVLQE-PSKPSPRRNLRLLKANYIK 69

Query: 216 DFTFLGREXXXXXXXXXXXXXGSXXXXXXXXXXXXXXXXXXXGVGVTTEAQSIFDALSKT 395
           DFTFLG                +                   GVGVT+EAQSIFDALSKT
Sbjct: 70  DFTFLGHAQDPLDPNTCFLDLTALQQREDVAVRQAEADAERIGVGVTSEAQSIFDALSKT 129

Query: 396 LPVRWDKTVIVVMNEVRVHSPYLPENVNGGTPAANDRVKKVLELERKRLQARTPG 560
           LPVRWDKTVIVVMNEVRV SPY  E+V GGTPAANDRVKKVLE ERKRLQ R+ G
Sbjct: 130 LPVRWDKTVIVVMNEVRVSSPYHSESVVGGTPAANDRVKKVLEFERKRLQLRSSG 184


>ref|XP_003628665.1| LSM12-like protein [Medicago truncatula]
           gi|355522687|gb|AET03141.1| LSM12-like protein [Medicago
           truncatula] gi|388519341|gb|AFK47732.1| unknown
           [Medicago truncatula]
          Length = 188

 Score =  209 bits (532), Expect = 3e-52
 Identities = 114/182 (62%), Positives = 128/182 (70%)
 Frame = +3

Query: 15  ESSAMEGSNGEELAVGCTLAIRTTLGDEIEGQIITFDRPSNFLVIQEGSSKVGSRRNLRL 194
           ES +   +NG+E AVGC L+IRTTLGDE EGQ++TFDR SN+LV+QEGS K G RRN+RL
Sbjct: 6   ESGSNNNNNGDEFAVGCFLSIRTTLGDEFEGQVVTFDRDSNYLVLQEGS-KHGPRRNIRL 64

Query: 195 LKANYIKDFTFLGREXXXXXXXXXXXXXGSXXXXXXXXXXXXXXXXXXXGVGVTTEAQSI 374
           LKA+YIKDFTFLG+               +                   GVGVT+EAQ+I
Sbjct: 65  LKADYIKDFTFLGQGQDPLDPNHCLLDINALQSREELAIRQAEADAERIGVGVTSEAQNI 124

Query: 375 FDALSKTLPVRWDKTVIVVMNEVRVHSPYLPENVNGGTPAANDRVKKVLELERKRLQART 554
           FDALSKTLPVRWDKTVIVVMNEVRV SPY  E V GGTPAANDRVKKVLE ERKRLQ R 
Sbjct: 125 FDALSKTLPVRWDKTVIVVMNEVRVSSPYHSECVIGGTPAANDRVKKVLEFERKRLQLRG 184

Query: 555 PG 560
            G
Sbjct: 185 SG 186


>ref|XP_004135229.1| PREDICTED: uncharacterized protein LOC101211481 [Cucumis sativus]
           gi|449478540|ref|XP_004155346.1| PREDICTED:
           uncharacterized LOC101211481 [Cucumis sativus]
          Length = 181

 Score =  209 bits (531), Expect = 3e-52
 Identities = 113/181 (62%), Positives = 131/181 (72%), Gaps = 1/181 (0%)
 Frame = +3

Query: 24  AMEGS-NGEELAVGCTLAIRTTLGDEIEGQIITFDRPSNFLVIQEGSSKVGSRRNLRLLK 200
           A++GS NG++ +VG   +I+TTLGDE +GQ+ITFDRPSN LV+QEGS K G RRN+RLLK
Sbjct: 2   ALDGSGNGDDFSVGSFFSIKTTLGDEFQGQVITFDRPSNILVLQEGS-KPGPRRNIRLLK 60

Query: 201 ANYIKDFTFLGREXXXXXXXXXXXXXGSXXXXXXXXXXXXXXXXXXXGVGVTTEAQSIFD 380
           ANYIK+F+FLG                +                   GVGVT+EAQSIFD
Sbjct: 61  ANYIKEFSFLGHGEDPLDLKNCYLDLNTLRAREELAIRQAEAEAERIGVGVTSEAQSIFD 120

Query: 381 ALSKTLPVRWDKTVIVVMNEVRVHSPYLPENVNGGTPAANDRVKKVLELERKRLQARTPG 560
           ALSKTLPVRWDKTVIVVMNEVRV SPYLPE+V+GGTPAAN+RVKKVLE ERKRLQ R  G
Sbjct: 121 ALSKTLPVRWDKTVIVVMNEVRVSSPYLPESVSGGTPAANERVKKVLEWERKRLQVRGGG 180

Query: 561 Q 563
           Q
Sbjct: 181 Q 181


>gb|AFK45434.1| unknown [Lotus japonicus]
          Length = 181

 Score =  206 bits (524), Expect = 2e-51
 Identities = 114/179 (63%), Positives = 126/179 (70%), Gaps = 1/179 (0%)
 Frame = +3

Query: 27  MEGSNG-EELAVGCTLAIRTTLGDEIEGQIITFDRPSNFLVIQEGSSKVGSRRNLRLLKA 203
           ME SN  EELA+GC L+IRTTLGDE EGQ++TFDRPSN L++Q+GS K G  RN RLLKA
Sbjct: 2   MEVSNSVEELAIGCILSIRTTLGDEFEGQVVTFDRPSNILILQQGS-KHGPHRNFRLLKA 60

Query: 204 NYIKDFTFLGREXXXXXXXXXXXXXGSXXXXXXXXXXXXXXXXXXXGVGVTTEAQSIFDA 383
           NYIKDFTFLG+               +                   GVGVT+EAQSIFDA
Sbjct: 61  NYIKDFTFLGQAEDPLDPTNCFLDLTALQAREVVAIRQAEADAERIGVGVTSEAQSIFDA 120

Query: 384 LSKTLPVRWDKTVIVVMNEVRVHSPYLPENVNGGTPAANDRVKKVLELERKRLQARTPG 560
           LSKTLPVRWDKTVIVVMNEVRV SPY  ++V GGTPAANDRVKKVLE ERKRLQ R  G
Sbjct: 121 LSKTLPVRWDKTVIVVMNEVRVGSPYNSDSVIGGTPAANDRVKKVLEFERKRLQLRGSG 179


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