BLASTX nr result
ID: Dioscorea21_contig00003883
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00003883 (442 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI15530.3| unnamed protein product [Vitis vinifera] 197 1e-48 ref|XP_002280982.1| PREDICTED: eukaryotic peptide chain release ... 197 1e-48 ref|XP_002329194.1| predicted protein [Populus trichocarpa] gi|2... 197 1e-48 ref|XP_003631062.1| Eukaryotic peptide chain release factor GTP-... 196 2e-48 ref|XP_003532534.1| PREDICTED: eukaryotic peptide chain release ... 195 3e-48 >emb|CBI15530.3| unnamed protein product [Vitis vinifera] Length = 8416 Score = 197 bits (500), Expect = 1e-48 Identities = 107/147 (72%), Positives = 111/147 (75%) Frame = +1 Query: 1 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTSEEERVKGKTVEVG 180 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDT+EEERVKGKTVEVG Sbjct: 7996 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVG 8055 Query: 181 RAHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASQADVGVLVISARKGEFET 360 RAHF ASQAD+GVLVISARKGEFET Sbjct: 8056 RAHF-----------ETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFET 8104 Query: 361 GYEKGGQTREHVQLAKTLGVSKLVVVV 441 GYE+GGQTREHVQLAKTLGVSKL+VVV Sbjct: 8105 GYERGGQTREHVQLAKTLGVSKLLVVV 8131 >ref|XP_002280982.1| PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3B-like [Vitis vinifera] Length = 512 Score = 197 bits (500), Expect = 1e-48 Identities = 107/147 (72%), Positives = 111/147 (75%) Frame = +1 Query: 1 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTSEEERVKGKTVEVG 180 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDT+EEERVKGKTVEVG Sbjct: 92 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVG 151 Query: 181 RAHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASQADVGVLVISARKGEFET 360 RAHF ASQAD+GVLVISARKGEFET Sbjct: 152 RAHF-----------ETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFET 200 Query: 361 GYEKGGQTREHVQLAKTLGVSKLVVVV 441 GYE+GGQTREHVQLAKTLGVSKL+VVV Sbjct: 201 GYERGGQTREHVQLAKTLGVSKLLVVV 227 >ref|XP_002329194.1| predicted protein [Populus trichocarpa] gi|222870975|gb|EEF08106.1| predicted protein [Populus trichocarpa] Length = 524 Score = 197 bits (500), Expect = 1e-48 Identities = 107/147 (72%), Positives = 111/147 (75%) Frame = +1 Query: 1 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTSEEERVKGKTVEVG 180 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDT+EEERVKGKTVEVG Sbjct: 104 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVG 163 Query: 181 RAHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASQADVGVLVISARKGEFET 360 RAHF ASQAD+GVLVISARKGEFET Sbjct: 164 RAHF-----------ETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFET 212 Query: 361 GYEKGGQTREHVQLAKTLGVSKLVVVV 441 GYE+GGQTREHVQLAKTLGVSKL+VVV Sbjct: 213 GYERGGQTREHVQLAKTLGVSKLLVVV 239 >ref|XP_003631062.1| Eukaryotic peptide chain release factor GTP-binding subunit [Medicago truncatula] gi|355525084|gb|AET05538.1| Eukaryotic peptide chain release factor GTP-binding subunit [Medicago truncatula] Length = 497 Score = 196 bits (497), Expect = 2e-48 Identities = 106/147 (72%), Positives = 111/147 (75%) Frame = +1 Query: 1 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTSEEERVKGKTVEVG 180 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDT+EEERVKGKTVEVG Sbjct: 83 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVG 142 Query: 181 RAHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASQADVGVLVISARKGEFET 360 RAHF ASQAD+GVLVISARKGEFET Sbjct: 143 RAHF-----------ETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFET 191 Query: 361 GYEKGGQTREHVQLAKTLGVSKLVVVV 441 GYE+GGQTREHVQLAKTLGV+KL+VVV Sbjct: 192 GYERGGQTREHVQLAKTLGVTKLLVVV 218 >ref|XP_003532534.1| PREDICTED: eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like [Glycine max] Length = 570 Score = 195 bits (496), Expect = 3e-48 Identities = 106/147 (72%), Positives = 111/147 (75%) Frame = +1 Query: 1 DAGKSTTGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTSEEERVKGKTVEVG 180 DAGKSTTGGQILFLSGQVD+RTIQKYEKEAKDKSRESWYMAYIMDT+EEERVKGKTVEVG Sbjct: 156 DAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVG 215 Query: 181 RAHFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASQADVGVLVISARKGEFET 360 RAHF ASQAD+GVLVISARKGEFET Sbjct: 216 RAHF-----------ETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFET 264 Query: 361 GYEKGGQTREHVQLAKTLGVSKLVVVV 441 GYE+GGQTREHVQLAKTLGVSKL+VVV Sbjct: 265 GYERGGQTREHVQLAKTLGVSKLLVVV 291