BLASTX nr result

ID: Dioscorea21_contig00003881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003881
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512270.1| nucleotide binding protein, putative [Ricinu...   299   3e-79
ref|XP_002319610.1| predicted protein [Populus trichocarpa] gi|2...   295   4e-78
ref|XP_003633666.1| PREDICTED: WD repeat-containing protein 48 h...   290   2e-76
emb|CBI34238.3| unnamed protein product [Vitis vinifera]              290   2e-76
ref|XP_002271491.1| PREDICTED: WD repeat-containing protein 48 h...   290   2e-76

>ref|XP_002512270.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223548231|gb|EEF49722.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 764

 Score =  299 bits (766), Expect = 3e-79
 Identities = 154/220 (70%), Positives = 169/220 (76%), Gaps = 1/220 (0%)
 Frame = -3

Query: 659 MHRVPXXXXXXXXXXXRKEKRLTYVLNDADGSKHCAGVNCLAVLKSPSSDSCDYLFTGSR 480
           MHRV            RKEKRLTYVLNDAD  KHC+GVNCLAVLKS  SD  DYLFTGSR
Sbjct: 1   MHRVGSAGNTSSSVRPRKEKRLTYVLNDADDKKHCSGVNCLAVLKSSVSDGSDYLFTGSR 60

Query: 479 DGTLKRWELGDNEVTCSATFESHIDWVNDAVLAGN-TLVSCSSDTTLKAWNCLSSGTCTR 303
           DGTLKRW L ++  TCSATFESH+DWVNDAVL G+ TL+SCSSDTTLK WNCLS GTCT+
Sbjct: 61  DGTLKRWALAEDSATCSATFESHVDWVNDAVLVGDSTLISCSSDTTLKTWNCLSDGTCTK 120

Query: 302 TFCQHSDYVICLAAAEKNSQIVASGGLGGEVFIWDIEAALAPIAKSNDYMEDEGLSGAVC 123
           T  QHSDYV CLAAAEKNS IVASGGLGGEVFIWD+EAALAP++KSND MED+  +G   
Sbjct: 121 TLRQHSDYVTCLAAAEKNSNIVASGGLGGEVFIWDLEAALAPVSKSNDPMEDDCSNGVNG 180

Query: 122 LGNSGLSMTNLRXXXXXXXXSAHNTQSPGYHPIAAKGHKE 3
             NS L MT+LR        S HN+QS G+ PIAAKGHKE
Sbjct: 181 SSNS-LPMTSLRTISSSNSISMHNSQSHGFVPIAAKGHKE 219


>ref|XP_002319610.1| predicted protein [Populus trichocarpa] gi|222857986|gb|EEE95533.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  295 bits (756), Expect = 4e-78
 Identities = 151/220 (68%), Positives = 169/220 (76%), Gaps = 1/220 (0%)
 Frame = -3

Query: 659 MHRVPXXXXXXXXXXXRKEKRLTYVLNDADGSKHCAGVNCLAVLKSPSSDSCDYLFTGSR 480
           MHRV            RKEKRLTYVL+DAD +KHCAG+NCL VLKS  SD  DYLFTGSR
Sbjct: 1   MHRVGSAGNTNNSVRPRKEKRLTYVLSDADDTKHCAGINCLKVLKSTVSDGRDYLFTGSR 60

Query: 479 DGTLKRWELGDNEVTCSATFESHIDWVNDAVLAGN-TLVSCSSDTTLKAWNCLSSGTCTR 303
           DGTLKRW L ++  TCSATFESH+DWVNDAVLAG+ TLVSCSSDTTLKAWNCLS GTCT+
Sbjct: 61  DGTLKRWALSEDSATCSATFESHVDWVNDAVLAGDRTLVSCSSDTTLKAWNCLSDGTCTK 120

Query: 302 TFCQHSDYVICLAAAEKNSQIVASGGLGGEVFIWDIEAALAPIAKSNDYMEDEGLSGAVC 123
           T  QHSDYVICLAAAEKNS +VASGGLGGEVFIWD+EAAL P++KS D MED+  +G   
Sbjct: 121 TLRQHSDYVICLAAAEKNSNVVASGGLGGEVFIWDVEAALTPVSKSGDAMEDDCSNGVNG 180

Query: 122 LGNSGLSMTNLRXXXXXXXXSAHNTQSPGYHPIAAKGHKE 3
             NS L +T+LR        SAH +QS GY P+ AKGHKE
Sbjct: 181 SANS-LPVTSLRTISSSNSISAHTSQSHGYVPVGAKGHKE 219


>ref|XP_003633666.1| PREDICTED: WD repeat-containing protein 48 homolog isoform 2 [Vitis
           vinifera]
          Length = 733

 Score =  290 bits (742), Expect = 2e-76
 Identities = 150/220 (68%), Positives = 166/220 (75%), Gaps = 1/220 (0%)
 Frame = -3

Query: 659 MHRVPXXXXXXXXXXXRKEKRLTYVLNDADGSKHCAGVNCLAVLKSPSSDSCDYLFTGSR 480
           MHRV            RKEKRLTYVLNDAD +KHCAG+NCLAV K  + D  DYLFTGSR
Sbjct: 1   MHRVGSAGNTSNSTRPRKEKRLTYVLNDADDTKHCAGINCLAVWKPLAPDGRDYLFTGSR 60

Query: 479 DGTLKRWELGDNEVTCSATFESHIDWVNDAVLAG-NTLVSCSSDTTLKAWNCLSSGTCTR 303
           DGTLKRWEL +   TCSATFESHIDWVNDAVLAG NTLVSCSSDTTLK WNCLS GTCTR
Sbjct: 61  DGTLKRWELTEEVATCSATFESHIDWVNDAVLAGDNTLVSCSSDTTLKTWNCLSDGTCTR 120

Query: 302 TFCQHSDYVICLAAAEKNSQIVASGGLGGEVFIWDIEAALAPIAKSNDYMEDEGLSGAVC 123
           T  QHSDYV CLAAAEKNS +VASGGLGGEVF+WD+EAAL P++KS+D ME++  +G   
Sbjct: 121 TLRQHSDYVTCLAAAEKNSNVVASGGLGGEVFVWDLEAALTPVSKSSDAMEEDCSNGING 180

Query: 122 LGNSGLSMTNLRXXXXXXXXSAHNTQSPGYHPIAAKGHKE 3
            GNS L +T+LR        S H T   GY P+AAKGHKE
Sbjct: 181 SGNS-LPITSLRTISSSNSISLHPTPPHGYVPVAAKGHKE 219


>emb|CBI34238.3| unnamed protein product [Vitis vinifera]
          Length = 781

 Score =  290 bits (742), Expect = 2e-76
 Identities = 150/220 (68%), Positives = 166/220 (75%), Gaps = 1/220 (0%)
 Frame = -3

Query: 659 MHRVPXXXXXXXXXXXRKEKRLTYVLNDADGSKHCAGVNCLAVLKSPSSDSCDYLFTGSR 480
           MHRV            RKEKRLTYVLNDAD +KHCAG+NCLAV K  + D  DYLFTGSR
Sbjct: 1   MHRVGSAGNTSNSTRPRKEKRLTYVLNDADDTKHCAGINCLAVWKPLAPDGRDYLFTGSR 60

Query: 479 DGTLKRWELGDNEVTCSATFESHIDWVNDAVLAG-NTLVSCSSDTTLKAWNCLSSGTCTR 303
           DGTLKRWEL +   TCSATFESHIDWVNDAVLAG NTLVSCSSDTTLK WNCLS GTCTR
Sbjct: 61  DGTLKRWELTEEVATCSATFESHIDWVNDAVLAGDNTLVSCSSDTTLKTWNCLSDGTCTR 120

Query: 302 TFCQHSDYVICLAAAEKNSQIVASGGLGGEVFIWDIEAALAPIAKSNDYMEDEGLSGAVC 123
           T  QHSDYV CLAAAEKNS +VASGGLGGEVF+WD+EAAL P++KS+D ME++  +G   
Sbjct: 121 TLRQHSDYVTCLAAAEKNSNVVASGGLGGEVFVWDLEAALTPVSKSSDAMEEDCSNGING 180

Query: 122 LGNSGLSMTNLRXXXXXXXXSAHNTQSPGYHPIAAKGHKE 3
            GNS L +T+LR        S H T   GY P+AAKGHKE
Sbjct: 181 SGNS-LPITSLRTISSSNSISLHPTPPHGYVPVAAKGHKE 219


>ref|XP_002271491.1| PREDICTED: WD repeat-containing protein 48 homolog isoform 1 [Vitis
           vinifera]
          Length = 765

 Score =  290 bits (742), Expect = 2e-76
 Identities = 150/220 (68%), Positives = 166/220 (75%), Gaps = 1/220 (0%)
 Frame = -3

Query: 659 MHRVPXXXXXXXXXXXRKEKRLTYVLNDADGSKHCAGVNCLAVLKSPSSDSCDYLFTGSR 480
           MHRV            RKEKRLTYVLNDAD +KHCAG+NCLAV K  + D  DYLFTGSR
Sbjct: 1   MHRVGSAGNTSNSTRPRKEKRLTYVLNDADDTKHCAGINCLAVWKPLAPDGRDYLFTGSR 60

Query: 479 DGTLKRWELGDNEVTCSATFESHIDWVNDAVLAG-NTLVSCSSDTTLKAWNCLSSGTCTR 303
           DGTLKRWEL +   TCSATFESHIDWVNDAVLAG NTLVSCSSDTTLK WNCLS GTCTR
Sbjct: 61  DGTLKRWELTEEVATCSATFESHIDWVNDAVLAGDNTLVSCSSDTTLKTWNCLSDGTCTR 120

Query: 302 TFCQHSDYVICLAAAEKNSQIVASGGLGGEVFIWDIEAALAPIAKSNDYMEDEGLSGAVC 123
           T  QHSDYV CLAAAEKNS +VASGGLGGEVF+WD+EAAL P++KS+D ME++  +G   
Sbjct: 121 TLRQHSDYVTCLAAAEKNSNVVASGGLGGEVFVWDLEAALTPVSKSSDAMEEDCSNGING 180

Query: 122 LGNSGLSMTNLRXXXXXXXXSAHNTQSPGYHPIAAKGHKE 3
            GNS L +T+LR        S H T   GY P+AAKGHKE
Sbjct: 181 SGNS-LPITSLRTISSSNSISLHPTPPHGYVPVAAKGHKE 219


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