BLASTX nr result

ID: Dioscorea21_contig00003872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003872
         (527 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA48734.1| TPA: hypothetical protein ZEAMMB73_878535 [Zea m...   326   1e-87
ref|NP_001149380.1| LOC100283005 [Zea mays] gi|195626806|gb|ACG3...   326   1e-87
gb|ACG34075.1| 26S proteasome non-ATPase regulatory subunit 3 [Z...   326   1e-87
gb|ACF84535.1| unknown [Zea mays] gi|223947913|gb|ACN28040.1| un...   326   1e-87
ref|XP_002279715.1| PREDICTED: probable 26S proteasome non-ATPas...   324   4e-87

>tpg|DAA48734.1| TPA: hypothetical protein ZEAMMB73_878535 [Zea mays]
          Length = 298

 Score =  326 bits (835), Expect = 1e-87
 Identities = 162/175 (92%), Positives = 170/175 (97%)
 Frame = +1

Query: 1   RKAPIAARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVRIGDLEL 180
           RKAP  ARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVR+GDLEL
Sbjct: 78  RKAPTTARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVRVGDLEL 137

Query: 181 FKTVAEKFSSIFSSDRTHNLIVRLRHNVIRTGLRNISIAYSRISLADVARKLRLDSENPV 360
           F+TVA+KF+S FS+DRT NLIVRLRHNVIRTGLRNISI+YSRISLAD+A+KLRLDSENPV
Sbjct: 138 FRTVADKFASTFSADRTRNLIVRLRHNVIRTGLRNISISYSRISLADIAKKLRLDSENPV 197

Query: 361 ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQFAFNSRIAFCLNM 525
           ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQ AFNSRIAFCLNM
Sbjct: 198 ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQIAFNSRIAFCLNM 252


>ref|NP_001149380.1| LOC100283005 [Zea mays] gi|195626806|gb|ACG35233.1| 26S proteasome
           non-ATPase regulatory subunit 3 [Zea mays]
          Length = 492

 Score =  326 bits (835), Expect = 1e-87
 Identities = 162/175 (92%), Positives = 170/175 (97%)
 Frame = +1

Query: 1   RKAPIAARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVRIGDLEL 180
           RKAP  ARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVR+GDLEL
Sbjct: 272 RKAPTTARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVRVGDLEL 331

Query: 181 FKTVAEKFSSIFSSDRTHNLIVRLRHNVIRTGLRNISIAYSRISLADVARKLRLDSENPV 360
           F+TVA+KF+S FS+DRT NLIVRLRHNVIRTGLRNISI+YSRISLAD+A+KLRLDSENPV
Sbjct: 332 FRTVADKFASTFSADRTRNLIVRLRHNVIRTGLRNISISYSRISLADIAKKLRLDSENPV 391

Query: 361 ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQFAFNSRIAFCLNM 525
           ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQ AFNSRIAFCLNM
Sbjct: 392 ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQIAFNSRIAFCLNM 446


>gb|ACG34075.1| 26S proteasome non-ATPase regulatory subunit 3 [Zea mays]
          Length = 492

 Score =  326 bits (835), Expect = 1e-87
 Identities = 162/175 (92%), Positives = 170/175 (97%)
 Frame = +1

Query: 1   RKAPIAARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVRIGDLEL 180
           RKAP  ARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVR+GDLEL
Sbjct: 272 RKAPTTARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVRVGDLEL 331

Query: 181 FKTVAEKFSSIFSSDRTHNLIVRLRHNVIRTGLRNISIAYSRISLADVARKLRLDSENPV 360
           F+TVA+KF+S FS+DRT NLIVRLRHNVIRTGLRNISI+YSRISLAD+A+KLRLDSENPV
Sbjct: 332 FRTVADKFASTFSADRTRNLIVRLRHNVIRTGLRNISISYSRISLADIAKKLRLDSENPV 391

Query: 361 ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQFAFNSRIAFCLNM 525
           ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQ AFNSRIAFCLNM
Sbjct: 392 ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQIAFNSRIAFCLNM 446


>gb|ACF84535.1| unknown [Zea mays] gi|223947913|gb|ACN28040.1| unknown [Zea mays]
           gi|414870176|tpg|DAA48733.1| TPA: 26S proteasome
           non-ATPase regulatory subunit 3 [Zea mays]
          Length = 492

 Score =  326 bits (835), Expect = 1e-87
 Identities = 162/175 (92%), Positives = 170/175 (97%)
 Frame = +1

Query: 1   RKAPIAARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVRIGDLEL 180
           RKAP  ARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVR+GDLEL
Sbjct: 272 RKAPTTARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVRVGDLEL 331

Query: 181 FKTVAEKFSSIFSSDRTHNLIVRLRHNVIRTGLRNISIAYSRISLADVARKLRLDSENPV 360
           F+TVA+KF+S FS+DRT NLIVRLRHNVIRTGLRNISI+YSRISLAD+A+KLRLDSENPV
Sbjct: 332 FRTVADKFASTFSADRTRNLIVRLRHNVIRTGLRNISISYSRISLADIAKKLRLDSENPV 391

Query: 361 ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQFAFNSRIAFCLNM 525
           ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQ AFNSRIAFCLNM
Sbjct: 392 ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQIAFNSRIAFCLNM 446


>ref|XP_002279715.1| PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3
           [Vitis vinifera]
          Length = 487

 Score =  324 bits (831), Expect = 4e-87
 Identities = 159/175 (90%), Positives = 171/175 (97%)
 Frame = +1

Query: 1   RKAPIAARGFRIQCNKWAIIVRLLLGEIPERTVFMQKGMKKALTPYFELTNAVRIGDLEL 180
           RKAP++A GFR+QCNKWA+IVRLLLGEIPERTVFMQKGM+KAL PYFELTNAVRIGDLEL
Sbjct: 267 RKAPVSALGFRVQCNKWAVIVRLLLGEIPERTVFMQKGMEKALRPYFELTNAVRIGDLEL 326

Query: 181 FKTVAEKFSSIFSSDRTHNLIVRLRHNVIRTGLRNISIAYSRISLADVARKLRLDSENPV 360
           FK+VAEKFS+ FSSDRTHNLIVRLRHNVIRTGLRNISI+YSRISLADVA+KLRLDS NP+
Sbjct: 327 FKSVAEKFSTTFSSDRTHNLIVRLRHNVIRTGLRNISISYSRISLADVAQKLRLDSANPI 386

Query: 361 ADAESIVAKAIRDGAIDATIDHANGWMVSKETGDVYSTNEPQFAFNSRIAFCLNM 525
           ADAESIVAKAIRDGAIDAT+DHANGWMVSKETGD+YSTNEPQFAFNSRIAFCLNM
Sbjct: 387 ADAESIVAKAIRDGAIDATLDHANGWMVSKETGDIYSTNEPQFAFNSRIAFCLNM 441


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