BLASTX nr result

ID: Dioscorea21_contig00003851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003851
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329949.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
ref|XP_002307838.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C...   187   1e-45
gb|AFK33953.1| unknown [Medicago truncatula]                          187   1e-45
ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like i...   187   1e-45

>ref|XP_002329949.1| predicted protein [Populus trichocarpa] gi|222871971|gb|EEF09102.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  188 bits (477), Expect = 4e-46
 Identities = 91/95 (95%), Positives = 94/95 (98%)
 Frame = -1

Query: 287 MGHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 108
           MGH+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ++GKT
Sbjct: 1   MGHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60

Query: 107 VKAQIWDTAGQERYRAITSAYYRGAVGAFLVYDIT 3
           VKAQIWDTAGQERYRAITSAYYRGAVGA LVYDIT
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95


>ref|XP_002307838.1| predicted protein [Populus trichocarpa] gi|222853814|gb|EEE91361.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  188 bits (477), Expect = 4e-46
 Identities = 91/95 (95%), Positives = 94/95 (98%)
 Frame = -1

Query: 287 MGHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 108
           M H+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ++GKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKT 60

Query: 107 VKAQIWDTAGQERYRAITSAYYRGAVGAFLVYDIT 3
           VKAQIWDTAGQERYRAITSAYYRGAVGAFLVYDIT
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGAFLVYDIT 95


>sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C gi|1370146|emb|CAA98179.1|
           RAB11C [Lotus japonicus]
          Length = 216

 Score =  187 bits (474), Expect = 1e-45
 Identities = 91/95 (95%), Positives = 93/95 (97%)
 Frame = -1

Query: 287 MGHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 108
           M H+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 107 VKAQIWDTAGQERYRAITSAYYRGAVGAFLVYDIT 3
           VKAQIWDTAGQERYRAITSAYYRGAVGA LVYDIT
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95


>gb|AFK33953.1| unknown [Medicago truncatula]
          Length = 215

 Score =  187 bits (474), Expect = 1e-45
 Identities = 91/95 (95%), Positives = 93/95 (97%)
 Frame = -1

Query: 287 MGHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 108
           M H+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 107 VKAQIWDTAGQERYRAITSAYYRGAVGAFLVYDIT 3
           VKAQIWDTAGQERYRAITSAYYRGAVGA LVYDIT
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95


>ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
           gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related
           protein Rab11C-like isoform 2 [Glycine max]
          Length = 216

 Score =  187 bits (474), Expect = 1e-45
 Identities = 91/95 (95%), Positives = 93/95 (97%)
 Frame = -1

Query: 287 MGHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKT 108
           M H+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ+EGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 107 VKAQIWDTAGQERYRAITSAYYRGAVGAFLVYDIT 3
           VKAQIWDTAGQERYRAITSAYYRGAVGA LVYDIT
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIT 95


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