BLASTX nr result
ID: Dioscorea21_contig00003828
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00003828
(1945 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3... 659 0.0
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera] 657 0.0
ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3... 633 e-179
ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2... 633 e-179
ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2... 633 e-179
>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
Length = 510
Score = 659 bits (1699), Expect = 0.0
Identities = 317/489 (64%), Positives = 395/489 (80%), Gaps = 2/489 (0%)
Frame = -2
Query: 1854 QTLGTVLCCICGVPMEPNPANMCARCLRSRVDITEGLPRHAAIVYCPECSSWLQPPRSWL 1675
QT+G+VLCC CG+PM PN ANMC +CLRS +DITEGL +H IV+CPEC ++LQPP++W+
Sbjct: 12 QTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPECDTYLQPPKTWI 71
Query: 1674 RAELESPALLSLCLRRIHKPLSRLVRLVHGEFVWTEPHSKRIHVKLRVQREALHGAILEQ 1495
+A+LES LL+ C++R+ K L++ VRL+H EF+WTEPHSKRI VKLRVQ+E L+GAILEQ
Sbjct: 72 KAQLESKELLTFCVKRL-KNLNK-VRLIHAEFIWTEPHSKRIKVKLRVQKEVLNGAILEQ 129
Query: 1494 SHLVEFTVQDRLCESCSRAQASPDQWVASVQLRQHVPHRRTFFFLEQLILRHGAAARAVR 1315
+++VEF Q+ +CESCSR QA+PDQWVASVQLRQHVPHRRTFF+LEQLILRH AA RA++
Sbjct: 130 AYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHDAAGRAIK 189
Query: 1314 IKETSSGVDFFFGHRSHALKFVEFVSGVVPVRRRSDKQLVSHDIKSNNYNYKYTFSVEIC 1135
IK+ G+DFFF +RSH +KFVEF+ V P R R DKQLVSHD KSNNYNYKYTFSVEIC
Sbjct: 190 IKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKYTFSVEIC 249
Query: 1134 PICREDLICLPPKVSNSLGNLGPLVICAKVSNSILLVDPETLRTAFFDADEYWRTPFGAL 955
PICREDLICLPPKV+ SLGNLGPLVIC KVSN+I L+DP TLR F DAD+YWR+ F AL
Sbjct: 250 PICREDLICLPPKVAVSLGNLGPLVICTKVSNNIALLDPFTLRHCFLDADQYWRSSFKAL 309
Query: 954 LSSRQLVEFIVLDVKEKTPEVTVSGSRYCLARVEVARMSDFGQNDTTFDIKTHLGHLLKE 775
LSSRQLVE+IVLDV+ + EV V GS+Y LA +VAR+SDFG+NDT F+I+THLGHLL
Sbjct: 310 LSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLGHLLNP 369
Query: 774 GDVVLGYDLYSANSNDVEMDKYKGFELPYAILIKKSFEEKRQRKHGKQRKWRLKRMQMEV 595
GD LGYD+Y+ANSND+E++KY+GF LP AILIKKS+EEKRQRK GK R W+LK + MEV
Sbjct: 370 GDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEV 429
Query: 594 DDGARGRGSEEKXXXXXXXXXXXXXXNPTGMLDQMTIYKNKDHKPSETASMLSGDD--DL 421
DD ++GR +EK +P + +++Y+NK+++PSE ASM G+D +
Sbjct: 430 DD-SKGRADQEKMNTEYEVFLRDLEEDPE-LRFNISLYRNKEYQPSEMASMTDGEDLPSV 487
Query: 420 PLDELISKL 394
PL+EL++ L
Sbjct: 488 PLEELLADL 496
>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
Length = 594
Score = 657 bits (1696), Expect = 0.0
Identities = 316/489 (64%), Positives = 395/489 (80%), Gaps = 2/489 (0%)
Frame = -2
Query: 1854 QTLGTVLCCICGVPMEPNPANMCARCLRSRVDITEGLPRHAAIVYCPECSSWLQPPRSWL 1675
QT+G+VLCC CG+PM PN ANMC +CLRS +DITEGL +H IV+CPEC ++LQPP++W+
Sbjct: 12 QTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPECDTYLQPPKTWI 71
Query: 1674 RAELESPALLSLCLRRIHKPLSRLVRLVHGEFVWTEPHSKRIHVKLRVQREALHGAILEQ 1495
+A+LES LL+ C++R+ K L++ VRL+H EF+WTEPHSKRI VKLRVQ+E L+GAILEQ
Sbjct: 72 KAQLESKELLTFCVKRL-KNLNK-VRLIHAEFIWTEPHSKRIKVKLRVQKEVLNGAILEQ 129
Query: 1494 SHLVEFTVQDRLCESCSRAQASPDQWVASVQLRQHVPHRRTFFFLEQLILRHGAAARAVR 1315
+++VEF Q+ +CESCSR QA+PDQWVASVQLRQHVPHRRTFF+LEQLILRH AA RA++
Sbjct: 130 AYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHDAAGRAIK 189
Query: 1314 IKETSSGVDFFFGHRSHALKFVEFVSGVVPVRRRSDKQLVSHDIKSNNYNYKYTFSVEIC 1135
IK+ G+DFFF +RSH +KFVEF+ V P R R DKQLVSHD KSNNYNYKYTFSVEIC
Sbjct: 190 IKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKYTFSVEIC 249
Query: 1134 PICREDLICLPPKVSNSLGNLGPLVICAKVSNSILLVDPETLRTAFFDADEYWRTPFGAL 955
PICREDLICLPPKV+ SLGNLGP+VIC KVSN+I L+DP TLR F DAD+YWR+ F AL
Sbjct: 250 PICREDLICLPPKVAVSLGNLGPVVICTKVSNNIALLDPFTLRHCFLDADQYWRSSFKAL 309
Query: 954 LSSRQLVEFIVLDVKEKTPEVTVSGSRYCLARVEVARMSDFGQNDTTFDIKTHLGHLLKE 775
LSSRQLVE+IVLDV+ + EV V GS+Y LA +VAR+SDFG+NDT F+I+THLGHLL
Sbjct: 310 LSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKNDTIFNIRTHLGHLLNP 369
Query: 774 GDVVLGYDLYSANSNDVEMDKYKGFELPYAILIKKSFEEKRQRKHGKQRKWRLKRMQMEV 595
GD LGYD+Y+ANSND+E++KY+GF LP AILIKKS+EEKRQRK GK R W+LK + MEV
Sbjct: 370 GDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSYEEKRQRKRGKPRSWKLKSLNMEV 429
Query: 594 DDGARGRGSEEKXXXXXXXXXXXXXXNPTGMLDQMTIYKNKDHKPSETASMLSGDD--DL 421
DD ++GR +EK +P + +++Y+NK+++PSE ASM G+D +
Sbjct: 430 DD-SKGRADQEKMNTEYEVFLRDLEEDPE-LRFNISLYRNKEYQPSEMASMTDGEDLPSV 487
Query: 420 PLDELISKL 394
PL+EL++ L
Sbjct: 488 PLEELLADL 496
>ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3-like [Glycine max]
Length = 510
Score = 633 bits (1632), Expect = e-179
Identities = 308/488 (63%), Positives = 385/488 (78%), Gaps = 1/488 (0%)
Frame = -2
Query: 1854 QTLGTVLCCICGVPMEPNPANMCARCLRSRVDITEGLPRHAAIVYCPECSSWLQPPRSWL 1675
QT+G+VLCC CG+PM+PN ANMC +CLRS VDITEGL + +V+CPEC S+LQPPRSW+
Sbjct: 18 QTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVLVHCPECESYLQPPRSWV 77
Query: 1674 RAELESPALLSLCLRRIHKPL-SRLVRLVHGEFVWTEPHSKRIHVKLRVQREALHGAILE 1498
+ +LES LL+ CL+++ K L S VRLVH EF+WTEPHS+R+ VK++VQ+E L+GAILE
Sbjct: 78 KLQLESKELLTFCLKKLQKNLNSNKVRLVHAEFIWTEPHSRRVKVKVKVQKEVLNGAILE 137
Query: 1497 QSHLVEFTVQDRLCESCSRAQASPDQWVASVQLRQHVPHRRTFFFLEQLILRHGAAARAV 1318
QS+ VE+ Q+ +CESCSR QA+PDQWVA+VQLRQHV HRRTFF+LEQLIL+HGAAA A+
Sbjct: 138 QSYPVEYVQQEHMCESCSRVQANPDQWVAAVQLRQHVSHRRTFFYLEQLILKHGAAATAI 197
Query: 1317 RIKETSSGVDFFFGHRSHALKFVEFVSGVVPVRRRSDKQLVSHDIKSNNYNYKYTFSVEI 1138
RIK+ G+DFFF +RSH +KFVEF+ V PVR R DKQLVSHD KSNNYNYKYTFSVEI
Sbjct: 198 RIKQMEQGIDFFFSNRSHGVKFVEFIGKVSPVRSRHDKQLVSHDPKSNNYNYKYTFSVEI 257
Query: 1137 CPICREDLICLPPKVSNSLGNLGPLVICAKVSNSILLVDPETLRTAFFDADEYWRTPFGA 958
PICREDLICLPP+V+ SLGN+GPLVIC KV+NSI L+DP TLR F DAD+YWRT F +
Sbjct: 258 SPICREDLICLPPRVAVSLGNIGPLVICTKVTNSIALLDPFTLRHCFIDADQYWRTSFKS 317
Query: 957 LLSSRQLVEFIVLDVKEKTPEVTVSGSRYCLARVEVARMSDFGQNDTTFDIKTHLGHLLK 778
LL+SRQLVE+IVLDV+ + EVT+ G++Y LA +VAR+SDFG+NDT F+IKTHLGHLL
Sbjct: 318 LLTSRQLVEYIVLDVETVSSEVTIGGTKYRLADAQVARVSDFGKNDTIFNIKTHLGHLLN 377
Query: 777 EGDVVLGYDLYSANSNDVEMDKYKGFELPYAILIKKSFEEKRQRKHGKQRKWRLKRMQME 598
GD LGYDLY ANSND+E+DKYKG +P AILIKKS+EEK Q+K GK R W+LK ++ME
Sbjct: 378 PGDYALGYDLYGANSNDMELDKYKG-HIPEAILIKKSYEEKHQKKRGKPRSWKLKSLEME 436
Query: 597 VDDGARGRGSEEKXXXXXXXXXXXXXXNPTGMLDQMTIYKNKDHKPSETASMLSGDDDLP 418
VDD +GR E+K NP M +++Y+NK++KPS+ + +P
Sbjct: 437 VDD--KGRVDEDKMVSEYEQFIQDLEENPE-MRFNISLYRNKEYKPSD-----GDESSVP 488
Query: 417 LDELISKL 394
L+EL++ L
Sbjct: 489 LEELLADL 496
>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
predicted protein [Populus trichocarpa]
Length = 511
Score = 633 bits (1632), Expect = e-179
Identities = 303/489 (61%), Positives = 388/489 (79%), Gaps = 2/489 (0%)
Frame = -2
Query: 1854 QTLGTVLCCICGVPMEPNPANMCARCLRSRVDITEGLPRHAAIVYCPECSSWLQPPRSWL 1675
QT+G+VLCC CG+PM+PN ANMC +CLRS VDITEGL ++ +++CPEC ++L PP + +
Sbjct: 12 QTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLKKNVILLHCPECDTYLDPPSTRI 71
Query: 1674 RAELESPALLSLCLRRIHKPLSRLVRLVHGEFVWTEPHSKRIHVKLRVQREALHGAILEQ 1495
RA+LES L++ CL+++ K S V LV+ EF+WTEPHSKRI +++RVQ+E LHGAILEQ
Sbjct: 72 RAQLESRELMAFCLKKL-KLKSTGVILVNAEFIWTEPHSKRIKLRVRVQKEVLHGAILEQ 130
Query: 1494 SHLVEFTVQDRLCESCSRAQASPDQWVASVQLRQHVPHRRTFFFLEQLILRHGAAARAVR 1315
++++E+ QD++C+SC+R QA+PDQWVA VQLRQHV HRRTFF+LEQLIL+H AAARA++
Sbjct: 131 AYVIEYVQQDQMCDSCTRVQANPDQWVAGVQLRQHVAHRRTFFYLEQLILKHDAAARAIK 190
Query: 1314 IKETSSGVDFFFGHRSHALKFVEFVSGVVPVRRRSDKQLVSHDIKSNNYNYKYTFSVEIC 1135
IK+ G+DFFF +RSH +KFV+FV V PV+ R+DKQLVSHD KSNNYNYK+TFSVEI
Sbjct: 191 IKQMDHGIDFFFANRSHGVKFVDFVGKVAPVKSRNDKQLVSHDTKSNNYNYKHTFSVEIS 250
Query: 1134 PICREDLICLPPKVSNSLGNLGPLVICAKVSNSILLVDPETLRTAFFDADEYWRTPFGAL 955
PICREDL+CLPP+V+ SLGNLGPLVIC+KV+NSI L+DP TLR F DAD+YWRTPF +L
Sbjct: 251 PICREDLVCLPPRVAVSLGNLGPLVICSKVTNSIALLDPFTLRHCFLDADQYWRTPFKSL 310
Query: 954 LSSRQLVEFIVLDVKEKTPEVTVSGSRYCLARVEVARMSDFGQNDTTFDIKTHLGHLLKE 775
L+SRQLVE+IV DV +PEV + GSRY LA VARMSDFG+NDT F+IKTHLGH+LK
Sbjct: 311 LTSRQLVEYIVFDVDFVSPEVNIGGSRYALADATVARMSDFGKNDTMFNIKTHLGHILKP 370
Query: 774 GDVVLGYDLYSANSNDVEMDKYKGFELPYAILIKKSFEEKRQRKHGKQRKWRLKRMQMEV 595
GD LGYDL+ ANSND+E+DKYK +P AIL+KKS+EEKRQRK GK R W+LK + MEV
Sbjct: 371 GDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEV 430
Query: 594 DDGARGRGSEEKXXXXXXXXXXXXXXNPTGMLDQMTIYKNKDHKPSETASMLSGDD--DL 421
DD R RG +EK NP + +++Y+NK+++PSE ASM G+D +
Sbjct: 431 DD-TRARGDQEKMNSEYEQFLRDLEENPE-LRFNVSLYRNKEYQPSEMASMTDGEDIPSI 488
Query: 420 PLDELISKL 394
PL+EL++ L
Sbjct: 489 PLEELLADL 497
>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
predicted protein [Populus trichocarpa]
Length = 511
Score = 633 bits (1632), Expect = e-179
Identities = 303/489 (61%), Positives = 388/489 (79%), Gaps = 2/489 (0%)
Frame = -2
Query: 1854 QTLGTVLCCICGVPMEPNPANMCARCLRSRVDITEGLPRHAAIVYCPECSSWLQPPRSWL 1675
QT+G+VLCC CG+PM+PN ANMC +CLRS VDITEGL ++ +++CPEC ++L PP + +
Sbjct: 12 QTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLKKNVILLHCPECDTYLDPPSTRI 71
Query: 1674 RAELESPALLSLCLRRIHKPLSRLVRLVHGEFVWTEPHSKRIHVKLRVQREALHGAILEQ 1495
RA+LES L++ CL+++ K S V LV+ EF+WTEPHSKRI +++RVQ+E LHGAILEQ
Sbjct: 72 RAQLESRELMAFCLKKL-KLKSTGVILVNAEFIWTEPHSKRIKLRVRVQKEVLHGAILEQ 130
Query: 1494 SHLVEFTVQDRLCESCSRAQASPDQWVASVQLRQHVPHRRTFFFLEQLILRHGAAARAVR 1315
++++E+ QD++C+SC+R QA+PDQWVA VQLRQHV HRRTFF+LEQLIL+H AAARA++
Sbjct: 131 AYVIEYVQQDQMCDSCTRVQANPDQWVAGVQLRQHVAHRRTFFYLEQLILKHDAAARAIK 190
Query: 1314 IKETSSGVDFFFGHRSHALKFVEFVSGVVPVRRRSDKQLVSHDIKSNNYNYKYTFSVEIC 1135
IK+ G+DFFF +RSH +KFV+FV V PV+ R+DKQLVSHD KSNNYNYK+TFSVEI
Sbjct: 191 IKQMDHGIDFFFANRSHGVKFVDFVGKVAPVKSRNDKQLVSHDTKSNNYNYKHTFSVEIS 250
Query: 1134 PICREDLICLPPKVSNSLGNLGPLVICAKVSNSILLVDPETLRTAFFDADEYWRTPFGAL 955
PICREDL+CLPP+V+ SLGNLGPLVIC+KV+NSI L+DP TLR F DAD+YWRTPF +L
Sbjct: 251 PICREDLVCLPPRVAVSLGNLGPLVICSKVTNSIALLDPFTLRHCFLDADQYWRTPFKSL 310
Query: 954 LSSRQLVEFIVLDVKEKTPEVTVSGSRYCLARVEVARMSDFGQNDTTFDIKTHLGHLLKE 775
L+SRQLVE+IV DV +PEV + GSRY LA VARMSDFG+NDT F+IKTHLGH+LK
Sbjct: 311 LTSRQLVEYIVFDVDFVSPEVNIGGSRYALADATVARMSDFGKNDTMFNIKTHLGHILKP 370
Query: 774 GDVVLGYDLYSANSNDVEMDKYKGFELPYAILIKKSFEEKRQRKHGKQRKWRLKRMQMEV 595
GD LGYDL+ ANSND+E+DKYK +P AIL+KKS+EEKRQRK GK R W+LK + MEV
Sbjct: 371 GDYALGYDLHGANSNDMELDKYKNLVIPEAILVKKSYEEKRQRKRGKPRSWKLKSLNMEV 430
Query: 594 DDGARGRGSEEKXXXXXXXXXXXXXXNPTGMLDQMTIYKNKDHKPSETASMLSGDD--DL 421
DD R RG +EK NP + +++Y+NK+++PSE ASM G+D +
Sbjct: 431 DD-TRARGDQEKMNSEYEQFLRDLEENPE-LRFNVSLYRNKEYQPSEMASMTDGEDIPSI 488
Query: 420 PLDELISKL 394
PL+EL++ L
Sbjct: 489 PLEELLADL 497