BLASTX nr result

ID: Dioscorea21_contig00003801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003801
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001062288.2| Os08g0524600 [Oryza sativa Japonica Group] g...   191   9e-47
gb|ACF06459.1| ribosomal protein L32 [Elaeis guineensis]              187   1e-45
dbj|BAC75414.1| putative ribosomal protein L32 [Oryza sativa Jap...   187   1e-45
gb|ACF06464.1| ribosomal protein L32 [Elaeis guineensis]              185   6e-45
gb|ACF06460.1| ribosomal protein L32 [Elaeis guineensis]              184   8e-45

>ref|NP_001062288.2| Os08g0524600 [Oryza sativa Japonica Group]
           gi|255678588|dbj|BAF24202.2| Os08g0524600, partial
           [Oryza sativa Japonica Group]
          Length = 151

 Score =  191 bits (485), Expect = 9e-47
 Identities = 103/156 (66%), Positives = 108/156 (69%)
 Frame = +2

Query: 2   EEMAVPLLSXXXXXXXXXXXXXPQSDRKICVKPSWRRPKGIDSRVRRKFKGCTLMPNXXX 181
           EEMAVPLL+             P SDR +C+KPSWRRPKGIDSRVRRKFKGCTLMPN   
Sbjct: 17  EEMAVPLLTKKIVKKRVKQFKRPHSDRYLCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGY 76

Query: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPNRFKKFVVHNVSELEVLMMHNRTYCAEI 361
                                         LPN+FKKFVVHNVSELE+LMMHNRTYCAEI
Sbjct: 77  GSDKKTRHY---------------------LPNKFKKFVVHNVSELELLMMHNRTYCAEI 115

Query: 362 AHNVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE 469
           AHNVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE
Sbjct: 116 AHNVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE 151


>gb|ACF06459.1| ribosomal protein L32 [Elaeis guineensis]
          Length = 133

 Score =  187 bits (476), Expect = 1e-45
 Identities = 102/154 (66%), Positives = 107/154 (69%)
 Frame = +2

Query: 8   MAVPLLSXXXXXXXXXXXXXPQSDRKICVKPSWRRPKGIDSRVRRKFKGCTLMPNXXXXX 187
           MAVPLL+              QSDRKICVKP+WRRPKGIDSRVRRKFKGCTLMPN     
Sbjct: 1   MAVPLLAKKIVKKRVKKFKRAQSDRKICVKPNWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLPNRFKKFVVHNVSELEVLMMHNRTYCAEIAH 367
                                       LPNRFKKFVVHNVSELE+LMMHNRTYCAEIAH
Sbjct: 61  DKKTRHY---------------------LPNRFKKFVVHNVSELELLMMHNRTYCAEIAH 99

Query: 368 NVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE 469
           +VST+KRKEIVERAAQLDIVVTNKLARLRSQEDE
Sbjct: 100 DVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 133


>dbj|BAC75414.1| putative ribosomal protein L32 [Oryza sativa Japonica Group]
           gi|218201481|gb|EEC83908.1| hypothetical protein
           OsI_29957 [Oryza sativa Indica Group]
           gi|222640894|gb|EEE69026.1| hypothetical protein
           OsJ_27999 [Oryza sativa Japonica Group]
          Length = 133

 Score =  187 bits (475), Expect = 1e-45
 Identities = 101/154 (65%), Positives = 106/154 (68%)
 Frame = +2

Query: 8   MAVPLLSXXXXXXXXXXXXXPQSDRKICVKPSWRRPKGIDSRVRRKFKGCTLMPNXXXXX 187
           MAVPLL+             P SDR +C+KPSWRRPKGIDSRVRRKFKGCTLMPN     
Sbjct: 1   MAVPLLTKKIVKKRVKQFKRPHSDRYLCLKPSWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLPNRFKKFVVHNVSELEVLMMHNRTYCAEIAH 367
                                       LPN+FKKFVVHNVSELE+LMMHNRTYCAEIAH
Sbjct: 61  DKKTRHY---------------------LPNKFKKFVVHNVSELELLMMHNRTYCAEIAH 99

Query: 368 NVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE 469
           NVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE
Sbjct: 100 NVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE 133


>gb|ACF06464.1| ribosomal protein L32 [Elaeis guineensis]
          Length = 133

 Score =  185 bits (469), Expect = 6e-45
 Identities = 102/154 (66%), Positives = 106/154 (68%)
 Frame = +2

Query: 8   MAVPLLSXXXXXXXXXXXXXPQSDRKICVKPSWRRPKGIDSRVRRKFKGCTLMPNXXXXX 187
           MAVPLL+              QSDRKI VKP+WRRPKGIDSRVRRKFKGCTLMPN     
Sbjct: 1   MAVPLLAKKIVKKRVKKFKRAQSDRKISVKPNWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLPNRFKKFVVHNVSELEVLMMHNRTYCAEIAH 367
                                       LPNRFKKFVVHNVSELEVLMMHNRTYCAEIAH
Sbjct: 61  DKKTRHY---------------------LPNRFKKFVVHNVSELEVLMMHNRTYCAEIAH 99

Query: 368 NVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE 469
           +VST+KRKEIVERAAQLDIVVTNKLARLRSQEDE
Sbjct: 100 DVSTRKRKEIVERAAQLDIVVTNKLARLRSQEDE 133


>gb|ACF06460.1| ribosomal protein L32 [Elaeis guineensis]
          Length = 133

 Score =  184 bits (468), Expect = 8e-45
 Identities = 100/154 (64%), Positives = 106/154 (68%)
 Frame = +2

Query: 8   MAVPLLSXXXXXXXXXXXXXPQSDRKICVKPSWRRPKGIDSRVRRKFKGCTLMPNXXXXX 187
           MAVPLL+              QSDRKICVKP+WRRPKGIDSRVRRKFKGCTLMPN     
Sbjct: 1   MAVPLLAKRIVKKRVKKFKRAQSDRKICVKPNWRRPKGIDSRVRRKFKGCTLMPNIGYGS 60

Query: 188 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLPNRFKKFVVHNVSELEVLMMHNRTYCAEIAH 367
                                       LPN FKKFVVHNVSELE+LMMHNRTYCAEIAH
Sbjct: 61  DKKTRHY---------------------LPNHFKKFVVHNVSELELLMMHNRTYCAEIAH 99

Query: 368 NVSTKKRKEIVERAAQLDIVVTNKLARLRSQEDE 469
           +VST+KRK+IVERAAQLDIVVTNKLARLRSQEDE
Sbjct: 100 DVSTRKRKDIVERAAQLDIVVTNKLARLRSQEDE 133


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