BLASTX nr result

ID: Dioscorea21_contig00003695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003695
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281586.1| PREDICTED: NHP2-like protein 1-like [Vitis v...   208   7e-52
gb|AFK44952.1| unknown [Medicago truncatula]                          208   9e-52
ref|XP_004139318.1| PREDICTED: NHP2-like protein 1-like [Cucumis...   207   2e-51
emb|CBI31588.3| unnamed protein product [Vitis vinifera]              206   3e-51
gb|ADR71289.1| 60S ribosomal protein L7aA [Hevea brasiliensis]        206   4e-51

>ref|XP_002281586.1| PREDICTED: NHP2-like protein 1-like [Vitis vinifera]
          Length = 128

 Score =  208 bits (530), Expect = 7e-52
 Identities = 108/128 (84%), Positives = 113/128 (88%)
 Frame = +3

Query: 66  MSSQPVNPKAYPLADAHLTNTIMDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADT 245
           M+++ VNPKAYPLADA LT TI+DL+QQAANYKQLKKGANEATKTLNRGISEFIVMAADT
Sbjct: 1   MTAEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFIVMAADT 60

Query: 246 XXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLK 425
                       AEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLK
Sbjct: 61  EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLK 120

Query: 426 DAIEKLLI 449
           DAIEKLLI
Sbjct: 121 DAIEKLLI 128


>gb|AFK44952.1| unknown [Medicago truncatula]
          Length = 128

 Score =  208 bits (529), Expect = 9e-52
 Identities = 108/128 (84%), Positives = 112/128 (87%)
 Frame = +3

Query: 66  MSSQPVNPKAYPLADAHLTNTIMDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADT 245
           M+ + VNPKAYPLADA LT TIMDLVQQAANYKQLKKGANEATKTLNRGISEF+VMAADT
Sbjct: 1   MTGETVNPKAYPLADAQLTITIMDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADT 60

Query: 246 XXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLK 425
                       AEDKNVPYVFVPSKQALGRACGVTRPVIACSVT+NEGSQLKSQIQQLK
Sbjct: 61  EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLKSQIQQLK 120

Query: 426 DAIEKLLI 449
           DAIEKLLI
Sbjct: 121 DAIEKLLI 128


>ref|XP_004139318.1| PREDICTED: NHP2-like protein 1-like [Cucumis sativus]
           gi|449493622|ref|XP_004159380.1| PREDICTED: NHP2-like
           protein 1-like [Cucumis sativus]
          Length = 128

 Score =  207 bits (526), Expect = 2e-51
 Identities = 107/128 (83%), Positives = 112/128 (87%)
 Frame = +3

Query: 66  MSSQPVNPKAYPLADAHLTNTIMDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADT 245
           M+ + VNPKAYPLADA LT TI+DLVQQAANYKQLKKGANEATKTLNRGISEF+VMAADT
Sbjct: 1   MTGEAVNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFVVMAADT 60

Query: 246 XXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLK 425
                       AEDKNVPYVFVPSKQALGRACGVTRPVIACSVT+NEGSQLKSQIQQLK
Sbjct: 61  EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTTNEGSQLKSQIQQLK 120

Query: 426 DAIEKLLI 449
           DAIEKLLI
Sbjct: 121 DAIEKLLI 128


>emb|CBI31588.3| unnamed protein product [Vitis vinifera]
          Length = 142

 Score =  206 bits (525), Expect = 3e-51
 Identities = 107/127 (84%), Positives = 112/127 (88%)
 Frame = +3

Query: 69  SSQPVNPKAYPLADAHLTNTIMDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADTX 248
           +++ VNPKAYPLADA LT TI+DL+QQAANYKQLKKGANEATKTLNRGISEFIVMAADT 
Sbjct: 16  TAEAVNPKAYPLADAQLTITILDLIQQAANYKQLKKGANEATKTLNRGISEFIVMAADTE 75

Query: 249 XXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKD 428
                      AEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKD
Sbjct: 76  PLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLKD 135

Query: 429 AIEKLLI 449
           AIEKLLI
Sbjct: 136 AIEKLLI 142


>gb|ADR71289.1| 60S ribosomal protein L7aA [Hevea brasiliensis]
          Length = 128

 Score =  206 bits (524), Expect = 4e-51
 Identities = 108/128 (84%), Positives = 111/128 (86%)
 Frame = +3

Query: 66  MSSQPVNPKAYPLADAHLTNTIMDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADT 245
           M+ + VNPKAYPLADA LT TI+DLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADT
Sbjct: 1   MTGEAVNPKAYPLADAQLTITILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADT 60

Query: 246 XXXXXXXXXXXXAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLK 425
                       AEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLK QIQQLK
Sbjct: 61  EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKLQIQQLK 120

Query: 426 DAIEKLLI 449
           DAIEKLLI
Sbjct: 121 DAIEKLLI 128


Top