BLASTX nr result

ID: Dioscorea21_contig00003675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003675
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACG41053.1| kelch motif family protein [Zea mays]                  202   2e-50
gb|ACN29080.1| unknown [Zea mays] gi|238014938|gb|ACR38504.1| un...   201   6e-50
ref|NP_001170593.1| hypothetical protein [Zea mays] gi|238006234...   197   8e-49
ref|NP_001046481.1| Os02g0260200 [Oryza sativa Japonica Group] g...   193   1e-47
dbj|BAD20077.1| F-box-like protein [Oryza sativa Japonica Group]...   193   1e-47

>gb|ACG41053.1| kelch motif family protein [Zea mays]
          Length = 418

 Score =  202 bits (515), Expect = 2e-50
 Identities = 89/162 (54%), Positives = 123/162 (75%), Gaps = 5/162 (3%)
 Frame = -3

Query: 471 WESFPVNYFEVGLVENELLSKDING----GKCDMVVSLDAVLPDDVLEKILSLLPIASIL 304
           WE +P +Y    ++E   +S+D +G       D+ VSLDAVLPDD+LEK+LSLLP+AS++
Sbjct: 9   WELYPCSYSGSQVIEYRPVSEDEDGEDDQNGADVAVSLDAVLPDDLLEKVLSLLPVASVI 68

Query: 303 RARSVCKRWHSVVHSRSYSWMNRLPQKPWYFMFTRA-NSPTGYAFDPNLRKWYNFDLPCI 127
           R+ SVC+RWH +VH++ ++W   +P+KPWYFMFT + ++ +G+A+DP+LRKWY FD PCI
Sbjct: 69  RSGSVCRRWHEIVHAQRHAWSKTVPEKPWYFMFTCSQDAVSGFAYDPSLRKWYGFDFPCI 128

Query: 126 ERSNWLISSSHGLVCFMDNDNRSRIFVCNPITRYWTRIPEPP 1
           ERSNW  SSS GLVC MD+DNR  + VCNPIT+ W R+P+ P
Sbjct: 129 ERSNWATSSSAGLVCLMDSDNRRSVLVCNPITKDWKRLPDAP 170


>gb|ACN29080.1| unknown [Zea mays] gi|238014938|gb|ACR38504.1| unknown [Zea mays]
           gi|413936461|gb|AFW71012.1| F-box family protein [Zea
           mays]
          Length = 418

 Score =  201 bits (511), Expect = 6e-50
 Identities = 88/162 (54%), Positives = 122/162 (75%), Gaps = 5/162 (3%)
 Frame = -3

Query: 471 WESFPVNYFEVGLVENELLSKDING----GKCDMVVSLDAVLPDDVLEKILSLLPIASIL 304
           WE +P +Y    ++E   +S+D +G       D+ VSLDAVLPDD+LEK+LSLLP+AS++
Sbjct: 9   WELYPCSYSGSQVIEYRPVSEDEDGEDDQNGADVAVSLDAVLPDDLLEKVLSLLPVASVI 68

Query: 303 RARSVCKRWHSVVHSRSYSWMNRLPQKPWYFMFT-RANSPTGYAFDPNLRKWYNFDLPCI 127
           R+ SVC+RWH +VH++ ++W   +P+KPWYFMFT   ++ +G+A+DP+LRKWY FD PCI
Sbjct: 69  RSGSVCRRWHEIVHAQRHAWSKTVPEKPWYFMFTCSQDAVSGFAYDPSLRKWYGFDFPCI 128

Query: 126 ERSNWLISSSHGLVCFMDNDNRSRIFVCNPITRYWTRIPEPP 1
           ERSNW  SSS GLVC MD++NR  + VCNPIT+ W R+P+ P
Sbjct: 129 ERSNWATSSSAGLVCLMDSENRRSVLVCNPITKDWKRLPDAP 170


>ref|NP_001170593.1| hypothetical protein [Zea mays] gi|238006234|gb|ACR34152.1| unknown
           [Zea mays] gi|414881134|tpg|DAA58265.1| TPA:
           hypothetical protein ZEAMMB73_228787 [Zea mays]
          Length = 402

 Score =  197 bits (501), Expect = 8e-49
 Identities = 90/163 (55%), Positives = 121/163 (74%)
 Frame = -3

Query: 489 MENDASWESFPVNYFEVGLVENELLSKDINGGKCDMVVSLDAVLPDDVLEKILSLLPIAS 310
           ME+ +SW+  PV +    +  + ++S+  NGG  D  +SLDAV+PDD+LE+I + LPIAS
Sbjct: 1   MEDHSSWDYLPVEHIRTPVFNSGVVSEASNGGN-DFSISLDAVVPDDILERIFTFLPIAS 59

Query: 309 ILRARSVCKRWHSVVHSRSYSWMNRLPQKPWYFMFTRANSPTGYAFDPNLRKWYNFDLPC 130
           ++RA SVCKRWH ++ SR + W + LPQ+PWYFMFT   +  GYAFDP LRKWY+ +LP 
Sbjct: 60  MMRATSVCKRWHDIICSRRFLWTHMLPQRPWYFMFTSNKTAAGYAFDPILRKWYDLELPY 119

Query: 129 IERSNWLISSSHGLVCFMDNDNRSRIFVCNPITRYWTRIPEPP 1
           I++S+  ISSS GLVCFMDNDNR+ I VCNPIT++  R+ EPP
Sbjct: 120 IDKSSCFISSSCGLVCFMDNDNRNTISVCNPITKHSRRLLEPP 162


>ref|NP_001046481.1| Os02g0260200 [Oryza sativa Japonica Group]
           gi|113536012|dbj|BAF08395.1| Os02g0260200 [Oryza sativa
           Japonica Group]
          Length = 408

 Score =  193 bits (491), Expect = 1e-47
 Identities = 84/159 (52%), Positives = 119/159 (74%), Gaps = 2/159 (1%)
 Frame = -3

Query: 471 WESFPVNYFEVGLVENELLSKDINGGKC-DMVVSLDAVLPDDVLEKILSLLPIASILRAR 295
           WE +P ++    +++   +S D++  +  D+ VS+DAVLPDD+LEK+LS LP+AS++R+ 
Sbjct: 9   WELYPSSFIGAQVIDYGHVSGDMDDDQSGDLAVSMDAVLPDDLLEKVLSFLPVASVIRSG 68

Query: 294 SVCKRWHSVVHSRSYSWMNRLPQKPWYFMFT-RANSPTGYAFDPNLRKWYNFDLPCIERS 118
           SVCKRWH +VH+R  +W   +PQKPWYFMFT    + +G+ +DP+LRKWY FD PCIE++
Sbjct: 69  SVCKRWHEIVHARRQTWSKMVPQKPWYFMFTCSEEAVSGFTYDPSLRKWYGFDFPCIEKT 128

Query: 117 NWLISSSHGLVCFMDNDNRSRIFVCNPITRYWTRIPEPP 1
            W ISSS GLVC MD+++RSRI VCNPIT+ W R+ + P
Sbjct: 129 TWSISSSSGLVCLMDSEDRSRIIVCNPITKDWKRLVDAP 167


>dbj|BAD20077.1| F-box-like protein [Oryza sativa Japonica Group]
           gi|47497917|dbj|BAD20123.1| F-box-like protein [Oryza
           sativa Japonica Group] gi|125538877|gb|EAY85272.1|
           hypothetical protein OsI_06642 [Oryza sativa Indica
           Group] gi|125581549|gb|EAZ22480.1| hypothetical protein
           OsJ_06146 [Oryza sativa Japonica Group]
          Length = 405

 Score =  193 bits (491), Expect = 1e-47
 Identities = 84/159 (52%), Positives = 119/159 (74%), Gaps = 2/159 (1%)
 Frame = -3

Query: 471 WESFPVNYFEVGLVENELLSKDINGGKC-DMVVSLDAVLPDDVLEKILSLLPIASILRAR 295
           WE +P ++    +++   +S D++  +  D+ VS+DAVLPDD+LEK+LS LP+AS++R+ 
Sbjct: 6   WELYPSSFIGAQVIDYGHVSGDMDDDQSGDLAVSMDAVLPDDLLEKVLSFLPVASVIRSG 65

Query: 294 SVCKRWHSVVHSRSYSWMNRLPQKPWYFMFT-RANSPTGYAFDPNLRKWYNFDLPCIERS 118
           SVCKRWH +VH+R  +W   +PQKPWYFMFT    + +G+ +DP+LRKWY FD PCIE++
Sbjct: 66  SVCKRWHEIVHARRQTWSKMVPQKPWYFMFTCSEEAVSGFTYDPSLRKWYGFDFPCIEKT 125

Query: 117 NWLISSSHGLVCFMDNDNRSRIFVCNPITRYWTRIPEPP 1
            W ISSS GLVC MD+++RSRI VCNPIT+ W R+ + P
Sbjct: 126 TWSISSSSGLVCLMDSEDRSRIIVCNPITKDWKRLVDAP 164


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