BLASTX nr result

ID: Dioscorea21_contig00003672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003672
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002884623.1| GTP-binding family protein [Arabidopsis lyra...   402   e-110
ref|XP_002267566.1| PREDICTED: guanine nucleotide-binding protei...   399   e-109
ref|NP_187361.1| putative GTP-binding protein [Arabidopsis thali...   399   e-109
gb|AAK96878.1| putative GTPase [Arabidopsis thaliana]                 399   e-109
emb|CAN64618.1| hypothetical protein VITISV_001358 [Vitis vinifera]   398   e-109

>ref|XP_002884623.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330463|gb|EFH60882.1| GTP-binding family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 582

 Score =  402 bits (1034), Expect = e-110
 Identities = 197/238 (82%), Positives = 221/238 (92%)
 Frame = -3

Query: 718 EKWLNYLREELPTVAFKCSTQEQRSHLGWKSTSKASKKSDMLQTSDCLGAETLIKLLKNY 539
           EKWL YLREE P VAFKCSTQEQRS+LGWKS SKASK S+MLQTSDCLGA+TLIKLLKNY
Sbjct: 186 EKWLKYLREEFPAVAFKCSTQEQRSNLGWKS-SKASKPSNMLQTSDCLGADTLIKLLKNY 244

Query: 538 SRSHELKVSITVGIVGLPNVGKSSLINSLKRSHVVNVGATPGLTRSMQEVHLDKNVKLLD 359
           SRSHELK SITVGI+GLPNVGKSSLINSLKR+HVVNVGATPGLTRS+QEVHLDKNVKLLD
Sbjct: 245 SRSHELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLD 304

Query: 358 CPGVVMLKSSDDDASVALRNCKRIEKLEDPVGPVKKILDLCPAERLMSLYKLPSYSSVDD 179
           CPGVVMLKSS +DAS+ALRNCKRIEKL+DPV PVK+IL LCP + L++LYK+PS+ +VDD
Sbjct: 305 CPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKLCPTQMLVTLYKIPSFEAVDD 364

Query: 178 FLYKVATLRGKLKKGGIVDVEAAARIVLHDWNEGKIPYYTLPPVRNQVDNVEAVVVSE 5
           FLYKVAT+RGKLKKGG+VD+EAAARIVLHDWNEGKIPYYT+PP R+Q  + E+ +VSE
Sbjct: 365 FLYKVATVRGKLKKGGLVDIEAAARIVLHDWNEGKIPYYTMPPKRDQGGHAESKIVSE 422


>ref|XP_002267566.1| PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Vitis
           vinifera] gi|297744311|emb|CBI37281.3| unnamed protein
           product [Vitis vinifera]
          Length = 596

 Score =  399 bits (1025), Expect = e-109
 Identities = 194/239 (81%), Positives = 217/239 (90%)
 Frame = -3

Query: 718 EKWLNYLREELPTVAFKCSTQEQRSHLGWKSTSKASKKSDMLQTSDCLGAETLIKLLKNY 539
           EKWL YLREELP VAFKCSTQEQR+ LGW+S SKA+K S++LQTSDCLGAETLIKLLKNY
Sbjct: 199 EKWLKYLREELPAVAFKCSTQEQRTKLGWRSKSKAAKPSNILQTSDCLGAETLIKLLKNY 258

Query: 538 SRSHELKVSITVGIVGLPNVGKSSLINSLKRSHVVNVGATPGLTRSMQEVHLDKNVKLLD 359
           SRSHE+K SITVGI+GLPNVGKSSLINSLKRSHVVNVGATPGLTRS QEVHLDKNV LLD
Sbjct: 259 SRSHEIKTSITVGIIGLPNVGKSSLINSLKRSHVVNVGATPGLTRSRQEVHLDKNVILLD 318

Query: 358 CPGVVMLKSSDDDASVALRNCKRIEKLEDPVGPVKKILDLCPAERLMSLYKLPSYSSVDD 179
           CPGVVMLKS  +D S+ALRNCKRIEKL+D + PVK+IL LCPAE L++LYK+ S+ SVDD
Sbjct: 319 CPGVVMLKSGSNDTSIALRNCKRIEKLDDVINPVKEILKLCPAELLVTLYKISSFESVDD 378

Query: 178 FLYKVATLRGKLKKGGIVDVEAAARIVLHDWNEGKIPYYTLPPVRNQVDNVEAVVVSEF 2
           FL KVATLRGKLKKGG+VD EAAAR+VLHDWN+GKIPYYT+PP RNQ +N+EA +VSEF
Sbjct: 379 FLQKVATLRGKLKKGGVVDTEAAARMVLHDWNQGKIPYYTMPPSRNQGENLEATIVSEF 437


>ref|NP_187361.1| putative GTP-binding protein [Arabidopsis thaliana]
           gi|6729012|gb|AAF27009.1|AC016827_20 putative GTPase
           [Arabidopsis thaliana] gi|332640972|gb|AEE74493.1|
           putative GTP-binding protein [Arabidopsis thaliana]
           gi|414420744|gb|AFW99797.1| nucleostemin-like 1 protein
           [Arabidopsis thaliana]
          Length = 582

 Score =  399 bits (1025), Expect = e-109
 Identities = 195/238 (81%), Positives = 221/238 (92%)
 Frame = -3

Query: 718 EKWLNYLREELPTVAFKCSTQEQRSHLGWKSTSKASKKSDMLQTSDCLGAETLIKLLKNY 539
           EKWL YLREE P VAFKCSTQEQRS+LGWKS SKASK S+MLQTSDCLGA+TLIKLLKNY
Sbjct: 186 EKWLMYLREEFPAVAFKCSTQEQRSNLGWKS-SKASKPSNMLQTSDCLGADTLIKLLKNY 244

Query: 538 SRSHELKVSITVGIVGLPNVGKSSLINSLKRSHVVNVGATPGLTRSMQEVHLDKNVKLLD 359
           SRSHELK SITVGI+GLPNVGKSSLINSLKR+HVVNVGATPGLTRS+QEVHLDKNVKLLD
Sbjct: 245 SRSHELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLD 304

Query: 358 CPGVVMLKSSDDDASVALRNCKRIEKLEDPVGPVKKILDLCPAERLMSLYKLPSYSSVDD 179
           CPGVVMLKSS +DAS+ALRNCKRIEKL+DPV PVK+IL LCP + L++LYK+PS+ +VDD
Sbjct: 305 CPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKLCPKDMLVTLYKIPSFEAVDD 364

Query: 178 FLYKVATLRGKLKKGGIVDVEAAARIVLHDWNEGKIPYYTLPPVRNQVDNVEAVVVSE 5
           FLYKVAT+RGKLKKGG+VD++AAARIVLHDWNEGKIPYYT+PP R+Q  + E+ +V+E
Sbjct: 365 FLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEGKIPYYTMPPKRDQGGHAESKIVTE 422


>gb|AAK96878.1| putative GTPase [Arabidopsis thaliana]
          Length = 497

 Score =  399 bits (1025), Expect = e-109
 Identities = 195/238 (81%), Positives = 221/238 (92%)
 Frame = -3

Query: 718 EKWLNYLREELPTVAFKCSTQEQRSHLGWKSTSKASKKSDMLQTSDCLGAETLIKLLKNY 539
           EKWL YLREE P VAFKCSTQEQRS+LGWKS SKASK S+MLQTSDCLGA+TLIKLLKNY
Sbjct: 152 EKWLMYLREEFPAVAFKCSTQEQRSNLGWKS-SKASKPSNMLQTSDCLGADTLIKLLKNY 210

Query: 538 SRSHELKVSITVGIVGLPNVGKSSLINSLKRSHVVNVGATPGLTRSMQEVHLDKNVKLLD 359
           SRSHELK SITVGI+GLPNVGKSSLINSLKR+HVVNVGATPGLTRS+QEVHLDKNVKLLD
Sbjct: 211 SRSHELKKSITVGIIGLPNVGKSSLINSLKRAHVVNVGATPGLTRSLQEVHLDKNVKLLD 270

Query: 358 CPGVVMLKSSDDDASVALRNCKRIEKLEDPVGPVKKILDLCPAERLMSLYKLPSYSSVDD 179
           CPGVVMLKSS +DAS+ALRNCKRIEKL+DPV PVK+IL LCP + L++LYK+PS+ +VDD
Sbjct: 271 CPGVVMLKSSGNDASIALRNCKRIEKLDDPVSPVKEILKLCPKDMLVTLYKIPSFEAVDD 330

Query: 178 FLYKVATLRGKLKKGGIVDVEAAARIVLHDWNEGKIPYYTLPPVRNQVDNVEAVVVSE 5
           FLYKVAT+RGKLKKGG+VD++AAARIVLHDWNEGKIPYYT+PP R+Q  + E+ +V+E
Sbjct: 331 FLYKVATVRGKLKKGGLVDIDAAARIVLHDWNEGKIPYYTMPPKRDQGGHAESKIVTE 388


>emb|CAN64618.1| hypothetical protein VITISV_001358 [Vitis vinifera]
          Length = 593

 Score =  398 bits (1023), Expect = e-109
 Identities = 194/239 (81%), Positives = 217/239 (90%)
 Frame = -3

Query: 718 EKWLNYLREELPTVAFKCSTQEQRSHLGWKSTSKASKKSDMLQTSDCLGAETLIKLLKNY 539
           EKWL YLREELP VAFKCSTQEQR+ LGW+S SKA+K S++LQTSDCLGAETLIKLLKNY
Sbjct: 194 EKWLKYLREELPAVAFKCSTQEQRTKLGWRSKSKAAKPSNILQTSDCLGAETLIKLLKNY 253

Query: 538 SRSHELKVSITVGIVGLPNVGKSSLINSLKRSHVVNVGATPGLTRSMQEVHLDKNVKLLD 359
           SRSHE+K SITVGI+GLPNVGKSSLINSLKRSHVVNVGATPGLTRS QEVHLDKNV LLD
Sbjct: 254 SRSHEIKKSITVGIIGLPNVGKSSLINSLKRSHVVNVGATPGLTRSRQEVHLDKNVILLD 313

Query: 358 CPGVVMLKSSDDDASVALRNCKRIEKLEDPVGPVKKILDLCPAERLMSLYKLPSYSSVDD 179
           CPGVVMLKS  +D S+ALRNCKRIEKL+D + PVK+IL LCPAE L++LYK+ S+ SVDD
Sbjct: 314 CPGVVMLKSGSNDTSIALRNCKRIEKLDDVINPVKEILKLCPAELLVTLYKISSFESVDD 373

Query: 178 FLYKVATLRGKLKKGGIVDVEAAARIVLHDWNEGKIPYYTLPPVRNQVDNVEAVVVSEF 2
           FL KVATLRGKLKKGG+VD EAAAR+VLHDWN+GKIPYYT+PP RNQ +N+EA +VSEF
Sbjct: 374 FLQKVATLRGKLKKGGVVDTEAAARMVLHDWNQGKIPYYTMPPSRNQGENLEATIVSEF 432


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