BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003655
         (3494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [V...  1258   0.0  
ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1243   0.0  
ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-li...  1242   0.0  
gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nico...  1225   0.0  
ref|XP_002446635.1| hypothetical protein SORBIDRAFT_06g019330 [S...  1205   0.0  

>ref|XP_002280099.1| PREDICTED: RNA-dependent RNA polymerase 2 [Vitis vinifera]
            gi|297733815|emb|CBI15062.3| unnamed protein product
            [Vitis vinifera]
          Length = 1127

 Score = 1258 bits (3254), Expect = 0.0
 Identities = 635/1110 (57%), Positives = 817/1110 (73%), Gaps = 7/1110 (0%)
 Frame = -1

Query: 3482 MALPRRSTVRVSNIPPTAVAGELFDYFDAVVG--SVYACEIATARKNWKPRGFGRVQFDS 3309
            MA+  R TV+VSNIP TA+A EL+ + ++ +G  ++YA EIAT  KNWK RGFGRVQF++
Sbjct: 1    MAVGERPTVKVSNIPKTAIAKELWSFLESKLGPNTIYALEIATEHKNWKSRGFGRVQFET 60

Query: 3308 FLAADRAQLLSAEDRLPLFQRARLSVLPSLDDIVVRAVDEGNRIDDAEVFVGNLIAERTM 3129
              A   A LLS +  L +F+ + LS+  + DDI+VR V+  N++D   + VG L+ +  M
Sbjct: 61   LQAKRAADLLSLQGDL-VFRGSSLSISATFDDIIVRPVEPRNQVDSGVLHVGFLVEDDCM 119

Query: 3128 EVLESWDMVRVEVIPERKKVLVFLEDGSRLYKLEIMXXXXXXXXXXXXXXXXXGSEQDSI 2949
             VLESW+ V+  V+PER +V  +++     YKLE+                  G + +++
Sbjct: 120  LVLESWEGVKTLVMPERNRVEFWVDKDGERYKLEV----PFDDVLESSACCLGGGKVNAL 175

Query: 2948 LLQLNYAPRIFERISGSGLTLKCSGDRYRVCKEDFPFVWARTTDFSSTSSFGRSCYLCVR 2769
            LL+L YAP+IF++ +G  +  K S DRY + KED  F+W RTTDFSS  S G+S   C  
Sbjct: 176  LLKLKYAPKIFQKFAGPNIASKFSADRYHISKEDAEFLWLRTTDFSSIKSLGQSTSFCWE 235

Query: 2768 IKDGLSSAEILKSLPYVEELGYLSLTRHELSWSSSLLVPIIGIPQNKTVDYEVIFQLNSL 2589
            IK+G  + +I  S PY ++L  L+L + E   S S LVP++       + YE++FQLNSL
Sbjct: 236  IKEGFPALDIFASFPYYKDLTELTLEQGEGFCSDSGLVPLVKCESGPKLAYEILFQLNSL 295

Query: 2588 LHMQKISVGQLNGDLFDALSGLPLDLAAKILKKMHKLNSTCFDPVQFIQNQVSSIHKGQK 2409
            +H QKIS+  ++ DL + LS LP+D A  IL+K+HK  ST +DP+ FI+ Q   I+   K
Sbjct: 296  VHAQKISLAAVDTDLIEILSNLPVDTAIMILQKLHKRKSTRYDPISFIKAQAHIINMNIK 355

Query: 2408 T---SQFDKSTFTENLMSCHRALITPSKIYFLGPEVETSNYVVKYFSAHASNFLRVTFVE 2238
                S   + T   N+MSCHR L+TPSKIY LGPE+E+SNYVVK+++A+AS+F+RV+FVE
Sbjct: 356  NLPPSSHSRLT-NNNVMSCHRVLVTPSKIYCLGPELESSNYVVKHYAAYASDFVRVSFVE 414

Query: 2237 EDWSKLPADALLTNIERGVFSKPYRTNIYERILSILKNGIILGSKKFEFLAFSASQLRSN 2058
            EDWSKLP++AL  +I +  F+ P+RT IY RILSIL+ GI++G+K+F+FLAFSASQLRSN
Sbjct: 415  EDWSKLPSNALSMSIRKAFFADPFRTEIYHRILSILREGIVIGAKRFQFLAFSASQLRSN 474

Query: 2057 SVWMFASSEDVTAKSIREWMGHFDEIPTVSKCAARMGQLFSSSMQSFNVPSQDVQSIQDI 1878
            SVWMFAS++ V    IREWMG F +I +VSKCAARMGQLFSSS+Q+  VP QDV+ I DI
Sbjct: 475  SVWMFASNDKVRVDDIREWMGCFKKIRSVSKCAARMGQLFSSSVQTLPVPVQDVEVIPDI 534

Query: 1877 EVVTDGVKYCFSDGIGKISLAFARQVARKCGMSDTPSAFQIRYGGYKGVVTVDRTSFRKL 1698
            EV +DG  YCFSDGIGKISL+FA+QVA+KCG+  TPSAFQIRYGGYKGV+ VDR SFRKL
Sbjct: 535  EVTSDGFGYCFSDGIGKISLSFAKQVAQKCGLHQTPSAFQIRYGGYKGVIAVDRNSFRKL 594

Query: 1697 SLRQSMKKFDSSNTMLNITNCSDYLPCYLNREIICLLSTLGIEDEIFELMQQAEIHLLDQ 1518
            SLR SM KF+S N MLN+T  S+  PCYLNREI+ LLSTLG+EDE FE +   ++HLLD+
Sbjct: 595  SLRSSMLKFESQNRMLNVTKWSESTPCYLNREIVSLLSTLGVEDENFEALLNEQMHLLDK 654

Query: 1517 MLVESEAALTVLDRLNGFETKTTKT-MLMHGYAPNSEPYISMMLRACRDYQLSDIRSRCR 1341
            ML   +AAL VL+ + G + K     ML+ GY PN EPY+SMML+A R+ QLSDIR+RCR
Sbjct: 655  MLTNRQAALDVLESMGGIDNKNILAKMLLQGYEPNVEPYLSMMLQAYRESQLSDIRTRCR 714

Query: 1340 IFVPKGRLLIGCLDETGTLNYGEVYLRITMKGNERQQATDHTFFDKADQTTAVLIGKVVV 1161
            IFVPK R+LIGCLDETG LNYG+VY+R+TM   E +   + +FF K D TT+V+IGKV+V
Sbjct: 715  IFVPKARVLIGCLDETGILNYGQVYVRVTMTKAEHK-CRNQSFFQKVDDTTSVVIGKVIV 773

Query: 1160 TKNPCLHPGDVRVLQAIYEPGLDEMGLVDCLVFPQKGPRPHPNECSGGDLDGDLYFVCWD 981
            TKNPCLHPGD+RVL A+YE  L+E GLVDC++FPQKG RPHPNECSGGDLDGD +F+CWD
Sbjct: 774  TKNPCLHPGDIRVLDAVYEVELEEKGLVDCILFPQKGERPHPNECSGGDLDGDQFFICWD 833

Query: 980  ENLIPQKTDEPMDYTGRKPRFLDHAVTEEEIQKFFVDYMVNDTLGTISTTHLVYADKEPR 801
            E LIP +T+ PMDYT R+PR +DH VT EEIQKFFVDYM+NDTLG IST HLV+AD+EP 
Sbjct: 834  EGLIPSQTEAPMDYTSRRPRIMDHDVTLEEIQKFFVDYMINDTLGVISTAHLVHADREPE 893

Query: 800  KARSPKCLQLANLHSMAVDYAKTGAPAEMPRILRPKEFPDFMDRWDRPMYMSSGILGKLY 621
            KARS KCL+LA LHSMAVD+AKTGAPAEMPR+L+PKEFPDFM+R D+PMY+S+G LGKLY
Sbjct: 894  KARSKKCLELATLHSMAVDFAKTGAPAEMPRVLKPKEFPDFMERVDKPMYISNGALGKLY 953

Query: 620  RATLRKTDIERSEDTCFGVPVQSMYDGDLEVNGFEAFTEVAEEFRDLYSEKLSSLMTYYG 441
            RAT+     E+S     G    + YD DLEV+GFE F E+A+  +++Y+EK+++LM +YG
Sbjct: 954  RATIASRVNEKSSFVWSGTIPGAAYDHDLEVDGFETFLEIAKLHKEMYAEKMATLMNFYG 1013

Query: 440  AEHEDEILTGYLRNRSAYLQRDKRRYGEMRDRILLNVRNLQTEVKGWFDSSGSGSDTAKM 261
            AE EDE+LTG LRN+  YLQRD RR+ EM+DRIL++V++LQ E K W   S       KM
Sbjct: 1014 AESEDEMLTGNLRNKLMYLQRDNRRFTEMKDRILISVKSLQKEAKEWLYGSCKPHQHQKM 1073

Query: 260  ASACYHVTYHPNYYSAS-NFLSFPWIFSDV 174
            ASA YHVTYH  + S + NFLSFPWI  +V
Sbjct: 1074 ASAWYHVTYHSTFSSQTPNFLSFPWIVGEV 1103


>ref|XP_004166498.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
          Length = 1117

 Score = 1243 bits (3216), Expect = 0.0
 Identities = 623/1110 (56%), Positives = 822/1110 (74%), Gaps = 7/1110 (0%)
 Frame = -1

Query: 3482 MALPRRSTVRVSNIPPTAVAGELFDYFDAVVG--SVYACEIATARKNWKPRGFGRVQFDS 3309
            MA P RST+RVSN+P +A+A +L ++ ++ +G  SV+A EI T RKNWK RG GRVQF +
Sbjct: 1    MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 3308 FLAADRAQLLSAEDRLPL-FQRARLSVLPSLDDIVVRAVDEGNRIDDAEVFVGNLIAERT 3132
              A  +A  LS ++ L    Q  R S++   DDIVVR V   NR ++  + VG ++ E  
Sbjct: 61   LEAKAKAMSLSVQNSLVFGTQNLRFSLIN--DDIVVRPVHATNRTENGVLHVGFMLKEER 118

Query: 3131 MEVLESWDMVRVEVIPERKKVLVFLEDGSRLYKLEIMXXXXXXXXXXXXXXXXXGSEQDS 2952
            M VLESW+ V+  ++PER+++  ++      YKLE+M                   + ++
Sbjct: 119  MSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGE----EKLNA 174

Query: 2951 ILLQLNYAPRIFERISGSGLTLKCSGDRYRVCKEDFPFVWARTTDFSSTSSFGRSCYLCV 2772
            +LL+L YAPRI+++ISGS +  + S  RYR+C ED+ ++W RTT+FS   S G+S   C 
Sbjct: 175  LLLKLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCW 234

Query: 2771 RIKDGLSSAEILKSLPYVEELGY-LSLTRHELSWSSSLLVPIIGIPQNKTVDYEVIFQLN 2595
             +++ L +++I    P+ +E    + L   E   S+S +VP+I       + YEV +QLN
Sbjct: 235  EVEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLN 294

Query: 2594 SLLHMQKISVGQLNGDLFDALSGLPLDLAAKILKKMHKLNSTCFDPVQFIQNQVSSIHKG 2415
            SL+HMQKIS+   N DL D L  L +D A  +L+++H+L   C+DP+ F++ Q+    + 
Sbjct: 295  SLVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRN 354

Query: 2414 QKT-SQFDKSTFTENLMSCHRALITPSKIYFLGPEVETSNYVVKYFSAHASNFLRVTFVE 2238
             K+     +   + N+M+C+R L+TPS+IY LGPE+ETSNYVVK FS++AS+F+RVTFVE
Sbjct: 355  CKSLPPSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVE 414

Query: 2237 EDWSKLPADALLTNIERGVFSKPYRTNIYERILSILKNGIILGSKKFEFLAFSASQLRSN 2058
            EDWSKLPA A+ T+I+RG+ SKPYRT IY RI+++L++GI++G+K+FEFLAFSASQLRSN
Sbjct: 415  EDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSN 474

Query: 2057 SVWMFASSEDVTAKSIREWMGHFDEIPTVSKCAARMGQLFSSSMQSFNVPSQDVQSIQDI 1878
            SVWMFASS+++ A+ IR+WMG F++I ++SKCAARMGQLFSSS Q+  VP++DV+ I DI
Sbjct: 475  SVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDI 534

Query: 1877 EVVTDGVKYCFSDGIGKISLAFARQVARKCGMSDTPSAFQIRYGGYKGVVTVDRTSFRKL 1698
            EV TDG+ YCFSDGIGKISL+FARQVA KCG++  PSAFQIRYGGYKGV+ VDR SFRKL
Sbjct: 535  EVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKL 594

Query: 1697 SLRQSMKKFDSSNTMLNITNCSDYLPCYLNREIICLLSTLGIEDEIFELMQQAEIHLLDQ 1518
            SLR SM KF+S N MLN+T C D +PCYLNREI  LLSTLG++DE FE +QQ ++HLL +
Sbjct: 595  SLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKR 654

Query: 1517 MLVESEAALTVLDRLNGFETKTTKT-MLMHGYAPNSEPYISMMLRACRDYQLSDIRSRCR 1341
            ML + + AL VL+  +G ++      ML HGY PN EPY+SMML+A      SD+RSRCR
Sbjct: 655  MLTDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCR 714

Query: 1340 IFVPKGRLLIGCLDETGTLNYGEVYLRITMKGNERQQATDHTFFDKADQTTAVLIGKVVV 1161
            IFVPKGR+L+GCLDETG LNYG+VY  IT+  +E Q    + +F   D+T ++L+GKVVV
Sbjct: 715  IFVPKGRILLGCLDETGILNYGQVYACITLTKSELQNRNQN-YFHTIDETKSILLGKVVV 773

Query: 1160 TKNPCLHPGDVRVLQAIYEPGLDEMGLVDCLVFPQKGPRPHPNECSGGDLDGDLYFVCWD 981
            TKNPCLHPGDVRVL+AI+   L+E GLVDCL+FPQKG RPH NECSGGDLDGDLYF+ WD
Sbjct: 774  TKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWD 833

Query: 980  ENLIPQKTDEPMDYTGRKPRFLDHAVTEEEIQKFFVDYMVNDTLGTISTTHLVYADKEPR 801
            ENLIP KT+ PMDYTGR+PR +DH V  EEIQKFFVDYM+NDTLG IST HLV+AD+EP+
Sbjct: 834  ENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPK 893

Query: 800  KARSPKCLQLANLHSMAVDYAKTGAPAEMPRILRPKEFPDFMDRWDRPMYMSSGILGKLY 621
            KA S KCL+LA LHSMAVD+AKTGAPAEMPR+L+P+EFPDFM+R+D+PMY+SS +LGKLY
Sbjct: 894  KALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLY 953

Query: 620  RATLRKTDIERSEDTCFGVPVQSMYDGDLEVNGFEAFTEVAEEFRDLYSEKLSSLMTYYG 441
            RA ++  + ERS         +++YD DLEV+GFEAF E+AE ++++Y EK+S LM YYG
Sbjct: 954  RAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYG 1013

Query: 440  AEHEDEILTGYLRNRSAYLQRDKRRYGEMRDRILLNVRNLQTEVKGWFDSSGSGSDTAKM 261
            AE+EDEIL G LR+R++YLQRD R+YG+M+DRILL+V+NL+ EVK WF++S    +   M
Sbjct: 1014 AEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMM 1073

Query: 260  ASACYHVTYHPNYYSASNF-LSFPWIFSDV 174
            ASA YHVTYHP+Y+    F LSFPW  SDV
Sbjct: 1074 ASAWYHVTYHPSYFKEDMFYLSFPWAVSDV 1103


>ref|XP_004138117.1| PREDICTED: RNA-dependent RNA polymerase 2-like [Cucumis sativus]
            gi|316989905|gb|ADU77018.1| RNA-dependent RNA polymerase
            2 [Cucumis sativus]
          Length = 1117

 Score = 1242 bits (3213), Expect = 0.0
 Identities = 622/1110 (56%), Positives = 822/1110 (74%), Gaps = 7/1110 (0%)
 Frame = -1

Query: 3482 MALPRRSTVRVSNIPPTAVAGELFDYFDAVVG--SVYACEIATARKNWKPRGFGRVQFDS 3309
            MA P RST+RVSN+P +A+A +L ++ ++ +G  SV+A EI T RKNWK RG GRVQF +
Sbjct: 1    MAQPERSTLRVSNVPESAIAQDLLNFLNSKLGPDSVFAIEIFTERKNWKSRGSGRVQFTT 60

Query: 3308 FLAADRAQLLSAEDRLPL-FQRARLSVLPSLDDIVVRAVDEGNRIDDAEVFVGNLIAERT 3132
              A  +A  LS ++ L    Q  R S++   DDIVVR V   NR ++  + VG ++ E  
Sbjct: 61   LEAKAKAMSLSVQNSLVFGTQNLRFSLIN--DDIVVRPVHATNRTENGVLHVGFMLKEER 118

Query: 3131 MEVLESWDMVRVEVIPERKKVLVFLEDGSRLYKLEIMXXXXXXXXXXXXXXXXXGSEQDS 2952
            M VLESW+ V+  ++PER+++  ++      YKLE+M                   + ++
Sbjct: 119  MSVLESWEGVKAWIMPERRRIEFWIWHEQECYKLEVMFEEILETTGHCLGE----EKLNA 174

Query: 2951 ILLQLNYAPRIFERISGSGLTLKCSGDRYRVCKEDFPFVWARTTDFSSTSSFGRSCYLCV 2772
            +LL+L YAPRI+++ISGS +  + S  RYR+C ED+ ++W RTT+FS   S G+S   C 
Sbjct: 175  LLLKLKYAPRIYKKISGSNMASRFSSTRYRLCIEDYDYLWVRTTEFSPMRSVGQSTSFCW 234

Query: 2771 RIKDGLSSAEILKSLPYVEELGY-LSLTRHELSWSSSLLVPIIGIPQNKTVDYEVIFQLN 2595
             +++ L +++I    P+ +E    + L   E   S+S +VP+I       + YEV +QLN
Sbjct: 235  EVEEDLQASDIFSCFPFYKETQKDIVLEDGEEFCSTSEIVPLIKSGLGSNLAYEVEYQLN 294

Query: 2594 SLLHMQKISVGQLNGDLFDALSGLPLDLAAKILKKMHKLNSTCFDPVQFIQNQVSSIHKG 2415
            SL+HMQKIS+   N DL D L  L +D A  +L+++H+L   C+DP+ F++ Q+    + 
Sbjct: 295  SLVHMQKISLSAANQDLIDFLCTLDIDTALNVLQRLHQLKFVCYDPLSFLKTQLHVYKRN 354

Query: 2414 QKT-SQFDKSTFTENLMSCHRALITPSKIYFLGPEVETSNYVVKYFSAHASNFLRVTFVE 2238
             K+     +   + N+M+C+R L+TPS+IY LGPE+ETSNYVVK FS++AS+F+RVTFVE
Sbjct: 355  CKSLPPSSQKRLSNNVMNCYRVLVTPSRIYCLGPELETSNYVVKNFSSYASDFMRVTFVE 414

Query: 2237 EDWSKLPADALLTNIERGVFSKPYRTNIYERILSILKNGIILGSKKFEFLAFSASQLRSN 2058
            EDWSKLPA A+ T+I+RG+ SKPYRT IY RI+++L++GI++G+K+FEFLAFSASQLRSN
Sbjct: 415  EDWSKLPAGAVTTSIQRGILSKPYRTEIYHRIMTVLRDGIVIGAKRFEFLAFSASQLRSN 474

Query: 2057 SVWMFASSEDVTAKSIREWMGHFDEIPTVSKCAARMGQLFSSSMQSFNVPSQDVQSIQDI 1878
            SVWMFASS+++ A+ IR+WMG F++I ++SKCAARMGQLFSSS Q+  VP++DV+ I DI
Sbjct: 475  SVWMFASSDNLKAEEIRQWMGCFEKIRSISKCAARMGQLFSSSTQTLVVPTRDVEIIPDI 534

Query: 1877 EVVTDGVKYCFSDGIGKISLAFARQVARKCGMSDTPSAFQIRYGGYKGVVTVDRTSFRKL 1698
            EV TDG+ YCFSDGIGKISL+FARQVA KCG++  PSAFQIRYGGYKGV+ VDR SFRKL
Sbjct: 535  EVNTDGIDYCFSDGIGKISLSFARQVADKCGVNHIPSAFQIRYGGYKGVIAVDRNSFRKL 594

Query: 1697 SLRQSMKKFDSSNTMLNITNCSDYLPCYLNREIICLLSTLGIEDEIFELMQQAEIHLLDQ 1518
            SLR SM KF+S N MLN+T C D +PCYLNREI  LLSTLG++DE FE +QQ ++HLL +
Sbjct: 595  SLRDSMLKFESKNKMLNVTKCCDSMPCYLNREIATLLSTLGVKDESFEALQQEQLHLLKR 654

Query: 1517 MLVESEAALTVLDRLNGFETKTTKT-MLMHGYAPNSEPYISMMLRACRDYQLSDIRSRCR 1341
            ML + + AL VL+  +G ++      ML HGY PN EPY+SMML+A      SD+RSRCR
Sbjct: 655  MLTDKDVALNVLENFHGADSNNILVQMLNHGYEPNIEPYLSMMLQAHYWNLFSDLRSRCR 714

Query: 1340 IFVPKGRLLIGCLDETGTLNYGEVYLRITMKGNERQQATDHTFFDKADQTTAVLIGKVVV 1161
            IFVPKGR+L+GCLDETG LNYG+VY  IT+  +E Q + +  +F   D+T ++L+GKVVV
Sbjct: 715  IFVPKGRILLGCLDETGILNYGQVYACITLTKSELQ-SRNQNYFHTIDETKSILLGKVVV 773

Query: 1160 TKNPCLHPGDVRVLQAIYEPGLDEMGLVDCLVFPQKGPRPHPNECSGGDLDGDLYFVCWD 981
            TKNPCLHPGDVRVL+AI+   L+E GLVDCL+FPQKG RPH NECSGGDLDGDLYF+ WD
Sbjct: 774  TKNPCLHPGDVRVLEAIFHVELEEKGLVDCLIFPQKGARPHTNECSGGDLDGDLYFISWD 833

Query: 980  ENLIPQKTDEPMDYTGRKPRFLDHAVTEEEIQKFFVDYMVNDTLGTISTTHLVYADKEPR 801
            ENLIP KT+ PMDYTGR+PR +DH V  EEIQKFFVDYM+NDTLG IST HLV+AD+EP+
Sbjct: 834  ENLIPPKTEAPMDYTGRRPRIMDHDVKLEEIQKFFVDYMINDTLGAISTAHLVHADREPK 893

Query: 800  KARSPKCLQLANLHSMAVDYAKTGAPAEMPRILRPKEFPDFMDRWDRPMYMSSGILGKLY 621
            KA S KCL+LA LHSMAVD+AKTGAPAEMPR+L+P+EFPDFM+R+D+PMY+SS +LGKLY
Sbjct: 894  KALSAKCLELAALHSMAVDFAKTGAPAEMPRVLKPREFPDFMERFDKPMYISSNVLGKLY 953

Query: 620  RATLRKTDIERSEDTCFGVPVQSMYDGDLEVNGFEAFTEVAEEFRDLYSEKLSSLMTYYG 441
            RA ++  + ERS         +++YD DLEV+GFEAF E+AE ++++Y EK+S LM YYG
Sbjct: 954  RAAVKSIEQERSRLVWSEEAARAIYDYDLEVDGFEAFLEIAETYKEMYIEKMSILMNYYG 1013

Query: 440  AEHEDEILTGYLRNRSAYLQRDKRRYGEMRDRILLNVRNLQTEVKGWFDSSGSGSDTAKM 261
            AE+EDEIL G LR+R++YLQRD R+YG+M+DRILL+V+NL+ EVK WF++S    +   M
Sbjct: 1014 AEYEDEILMGDLRSRASYLQRDNRKYGDMKDRILLSVKNLRKEVKEWFENSCDPLNRRMM 1073

Query: 260  ASACYHVTYHPNYYSASNF-LSFPWIFSDV 174
            ASA YHVTYHP+Y+    F  SFPW  SDV
Sbjct: 1074 ASAWYHVTYHPSYFKEDMFYFSFPWAVSDV 1103


>gb|AAU21243.1| putative RNA-dependent RNA polymerase RdRP2 [Nicotiana benthamiana]
          Length = 1120

 Score = 1225 bits (3169), Expect = 0.0
 Identities = 618/1106 (55%), Positives = 803/1106 (72%), Gaps = 9/1106 (0%)
 Frame = -1

Query: 3464 STVRVSNIPPTAVAGELFDYFDAVVG--SVYACEIATARKNWKPRGFGRVQFDSFLAADR 3291
            +TVRVSNIP TA+A +LFD+F++ +G  SV+AC+I +  KNWK RG GRVQF++  +  +
Sbjct: 9    ATVRVSNIPQTAIAKQLFDFFESSIGKGSVFACDIFSEHKNWKSRGHGRVQFETSQSKLQ 68

Query: 3290 AQLLSAEDRLPLFQRARLSVLPSLDDIVVRAVDEGNRIDDAEVFVGNLIAERTMEVLESW 3111
            +  LS + +L +F+  +L +  S DDI+ R ++   R     +  G L+    MEVLE+W
Sbjct: 69   SLSLSEQGKL-VFKGHQLILTSSFDDIIARPIELNYRFQKGILHTGILLENDYMEVLETW 127

Query: 3110 DMVRVEVIPERKKVLVFLEDGS-RLYKLEIMXXXXXXXXXXXXXXXXXGSEQDSILLQLN 2934
            + V+  ++PERK +  ++       Y+LE+                    E+ ++LL+L 
Sbjct: 128  ENVKTLIMPERKSLEFWVSHAKGECYRLEVQFGDIIETCECSLE-----DEKTALLLKLK 182

Query: 2933 YAPRIFERISGSGLTLKCSGDRYRVCKEDFPFVWARTTDFSSTSSFGRSCYLCVRIKDGL 2754
            +AP++++R+SG G+  K S DRY VC+ED  F+W RTTDFS+  S G S   C  I+DGL
Sbjct: 183  HAPKLYQRVSGPGVASKFSSDRYHVCEEDCEFLWVRTTDFSAMKSIGCSSSPCWEIEDGL 242

Query: 2753 SSAEILKSLPYVEELGYLSLTRHELS--WSSSLLVPIIGIPQNKTVDYEVIFQLNSLLHM 2580
             S+++L  LPY      + L   E+   +S+S LVP+   P +  + YE++FQLNSL+H 
Sbjct: 243  LSSDLLSGLPYCNN-DVMDLVLDEVGDIYSASELVPLASFPSDLKLPYEILFQLNSLIHT 301

Query: 2579 QKISVGQLNGDLFDALSGLPLDLAAKILKKMHKLNSTCFDPVQFIQNQVSSIHKGQKT-- 2406
             KIS+G +  DL + LS L LD A  IL+KMHKL STCF+PV FI+ ++  + K  K   
Sbjct: 302  HKISLGAVKTDLIEVLSKLELDTAMMILQKMHKLQSTCFEPVPFIKTRLHVLGKNSKNQP 361

Query: 2405 SQFDKSTFTENLMSCHRALITPSKIYFLGPEVETSNYVVKYFSAHASNFLRVTFVEEDWS 2226
            S        +N+MS HR L+TPSK+Y LGPE+ETSNY+VK F+ HAS+FLRVTFVEEDW 
Sbjct: 362  SSSYSRLVNQNMMSVHRVLVTPSKVYCLGPELETSNYIVKNFALHASDFLRVTFVEEDWG 421

Query: 2225 KLPADALLTNIERGVFSKPYRTNIYERILSILKNGIILGSKKFEFLAFSASQLRSNSVWM 2046
            KL  +A+  ++E+G+F+KPYRT IY RILSIL++G+++GSK+F FLAFSASQLRSNSVWM
Sbjct: 422  KLSPNAISMSVEQGIFAKPYRTKIYHRILSILRDGLVIGSKRFLFLAFSASQLRSNSVWM 481

Query: 2045 FASSEDVTAKSIREWMGHFDEIPTVSKCAARMGQLFSSSMQSFNVPSQDVQSIQDIEVVT 1866
            FAS+E V A+ IREWMG F++I +VSKCAARMGQLFS+S Q+  V S  V+ + DIEV +
Sbjct: 482  FASNEHVKAEDIREWMGCFNKIRSVSKCAARMGQLFSTSFQTMEVQSPHVEILPDIEVTS 541

Query: 1865 DGVKYCFSDGIGKISLAFARQVARKCGMSDTPSAFQIRYGGYKGVVTVDRTSFRKLSLRQ 1686
            DGV YCFSDGIGKIS AFA QVA+KCG+S TPSAFQIRYGGYKGV+ VDR SFRKLSLR 
Sbjct: 542  DGVSYCFSDGIGKISQAFASQVAQKCGLSYTPSAFQIRYGGYKGVIAVDRNSFRKLSLRG 601

Query: 1685 SMKKFDSSNTMLNITNCSDYLPCYLNREIICLLSTLGIEDEIFELMQQAEIHLLDQMLVE 1506
            SM KF+S N MLNIT  SD +PCYLNREI+ LLSTLG+ED++FE +    +HLL +ML  
Sbjct: 602  SMLKFESKNRMLNITKWSDAMPCYLNREIVILLSTLGVEDKVFEDLLDNHLHLLGKMLTT 661

Query: 1505 SEAALTVLDRLNGFETKTTKTMLMH-GYAPNSEPYISMMLRACRDYQLSDIRSRCRIFVP 1329
            +EAAL VL+ + G + K     ++H GYAPN EPY+SMML++  + QLSD+RSRCRIF+ 
Sbjct: 662  NEAALDVLESIGGGDVKKILMRMLHQGYAPNLEPYLSMMLQSHFENQLSDLRSRCRIFIH 721

Query: 1328 KGRLLIGCLDETGTLNYGEVYLRITMKGNERQQATDHTFFDKADQTTAVLIGKVVVTKNP 1149
            KGR+L+GCLDETG LNYG+VY RITM   E Q A   +FF K D+TTAV+ G VVVTKNP
Sbjct: 722  KGRVLVGCLDETGILNYGQVYARITMTKAELQSA-QQSFFQKVDETTAVVRGNVVVTKNP 780

Query: 1148 CLHPGDVRVLQAIYEPGLDEMGLVDCLVFPQKGPRPHPNECSGGDLDGDLYFVCWDENLI 969
            CLHPGDVRVL+A+YE  L+E   VDC++FPQKG RPHPNECSGGDLDGDLYF+ WDENLI
Sbjct: 781  CLHPGDVRVLEAVYEVALEEKAWVDCIIFPQKGERPHPNECSGGDLDGDLYFISWDENLI 840

Query: 968  PQKTDEPMDYTGRKPRFLDHAVTEEEIQKFFVDYMVNDTLGTISTTHLVYADKEPRKARS 789
            P++T  PMDYTGR+ R +DH VT +EIQ+FFVDYM++DTLG IST HLV+AD+EP KA +
Sbjct: 841  PRQTVTPMDYTGRRTRIMDHEVTLQEIQRFFVDYMISDTLGAISTAHLVHADREPDKALN 900

Query: 788  PKCLQLANLHSMAVDYAKTGAPAEMPRILRPKEFPDFMDRWDRPMYMSSGILGKLYRATL 609
            PKCLQLA LHSMAVD+AKTGA AEMPR L+P+EFPDF++RWD+PMY+S G+LGKLYRA +
Sbjct: 901  PKCLQLATLHSMAVDFAKTGAAAEMPRFLKPREFPDFLERWDKPMYISEGVLGKLYRAIV 960

Query: 608  RKTDIERSEDTCFGVPVQSMYDGDLEVNGFEAFTEVAEEFRDLYSEKLSSLMTYYGAEHE 429
              +    S+D      +Q  YD  L  +G+EAF E A+  ++ Y ++++SL+ YYGAE E
Sbjct: 961  NSSVRSNSDDLGSVRAIQDAYDHALLFDGYEAFIETAKNHKETYLDRMNSLLNYYGAEKE 1020

Query: 428  DEILTGYLRNRSAYLQRDKRRYGEMRDRILLNVRNLQTEVKGWFDSSGSGSDTAKMASAC 249
             EILTG LR +S YLQRD RRY E++DRIL++ ++LQ EVKGWF       +  K+ASA 
Sbjct: 1021 VEILTGNLRQKSVYLQRDNRRYFELKDRILVSAKSLQKEVKGWFTGCCKEDEHKKLASAW 1080

Query: 248  YHVTYHPNYYSAS-NFLSFPWIFSDV 174
            YHVTYHP+Y   S N L FPW+  D+
Sbjct: 1081 YHVTYHPSYCEGSANCLGFPWVVGDI 1106


>ref|XP_002446635.1| hypothetical protein SORBIDRAFT_06g019330 [Sorghum bicolor]
            gi|241937818|gb|EES10963.1| hypothetical protein
            SORBIDRAFT_06g019330 [Sorghum bicolor]
          Length = 1128

 Score = 1205 bits (3118), Expect = 0.0
 Identities = 620/1111 (55%), Positives = 790/1111 (71%), Gaps = 8/1111 (0%)
 Frame = -1

Query: 3485 SMALPR---RSTVRVSNIPPTAVAGELFDYFDAVV---GSVYACEIATARKNWKPRGFGR 3324
            SMA P     +TVRV+NIP +A+A EL  +FD+ V   G+ +ACEIA A + W  RG G 
Sbjct: 2    SMAAPAPGATATVRVANIPASAIAAELLAFFDSAVTTTGAAFACEIAAAHRGWLSRGHGS 61

Query: 3323 VQFDSFLAADRAQLLSAEDRLPLFQRARLSVLPSLDDIVVRAVDEGNRIDDAEVFVGNLI 3144
            VQFDS  AA  A  L++  RLP F  + LSV P+  D++ RA D   R  DA + +GN +
Sbjct: 62   VQFDSSAAAIHAIDLASSGRLPPFLGSCLSVSPAHADLLPRAPDLSLRAADAGLILGNRV 121

Query: 3143 AERTMEVLESWDMVRVEVIPERKKVLVFLEDGSRLYKLEIMXXXXXXXXXXXXXXXXXGS 2964
            AER +E   SWD VR EVIP +++V ++L+  SR YKLE++                   
Sbjct: 122  AERELEAAYSWDGVRAEVIPRKRRVDLYLKQDSRSYKLEVLFEDIRECFGCHLDGTG--- 178

Query: 2963 EQDSILLQLNYAPRIFERISGSGLTLKCSGDRYRVCKEDFPFVWARTTDFSSTSSFGRSC 2784
               +ILLQL YAPRI+  ISGS +  + + DR+  CKED  F W R  DF+  +SFG   
Sbjct: 179  ---AILLQLTYAPRIYTAISGSTVKSRFTDDRFHACKEDAKFAWVRALDFTPNNSFGECS 235

Query: 2783 YLCVRIKDGLSSAEILKSLPYVEELGYLSLTRHELSWSSSLLVPIIGIPQNKTVDYEVIF 2604
             L +++  G+  ++IL+SLP+  EL  L+++      SSS +VP++  P   +V YEV+F
Sbjct: 236  TLVLKLSKGVPVSDILESLPFSGELEELAISSMLAFGSSSNVVPLVDCPNGFSVPYEVLF 295

Query: 2603 QLNSLLHMQKISVGQLNGDLFDALSGLPLDLAAKILKKMHKLNSTCFDPVQFIQNQVSSI 2424
            +LNSL+HM K+    +N DLF  L  L +D   +I +KM KL STC++P+QFI+++  S+
Sbjct: 296  RLNSLVHMGKLVARHVNADLFKVLEELSIDTLRRIFEKMSKLKSTCYEPLQFIRHEAHSM 355

Query: 2423 HKGQKTSQFDKSTFTENLMSCHRALITPSKIYFLGPEVETSNYVVKYFSAHASNFLRVTF 2244
             K +K    +K    + LM C+R  ITPSKIY LGPE E SNYVVKY S +AS+F RVTF
Sbjct: 356  SKSKKAFLSNKKDGGK-LMRCYRIHITPSKIYCLGPEEEVSNYVVKYHSEYASDFARVTF 414

Query: 2243 VEEDWSKLPADALLTNIERGVFSKPYRTNIYERILSILKNGIILGSKKFEFLAFSASQLR 2064
            V+EDWSKL  +AL    E+G FS P +T +Y RILSILK G  +G KK+EFLAFSASQLR
Sbjct: 415  VDEDWSKLSPNALSARTEQGFFSTPLKTGLYHRILSILKEGFCIGPKKYEFLAFSASQLR 474

Query: 2063 SNSVWMFASSEDVTAKSIREWMGHFDEIPTVSKCAARMGQLFSSSMQSFNVPSQDVQSIQ 1884
             NSVWMFAS+  +TA+SIR WMGHF++I +VSKCAARMGQLFSSS Q+F + S DV+ I 
Sbjct: 475  GNSVWMFASNNSLTAESIRRWMGHFEDIRSVSKCAARMGQLFSSSRQTFEISSYDVEVIP 534

Query: 1883 DIEVVTDGVKYCFSDGIGKISLAFARQVARKCGMSDT--PSAFQIRYGGYKGVVTVDRTS 1710
            DIEV +DG KY FSDGIGKIS  FARQ+A+  G+     PSAFQIRYGGYKGV+T+D TS
Sbjct: 535  DIEVTSDGTKYIFSDGIGKISTRFARQIAKLFGLDPAHPPSAFQIRYGGYKGVITIDPTS 594

Query: 1709 FRKLSLRQSMKKFDSSNTMLNITNCSDYLPCYLNREIICLLSTLGIEDEIFELMQQAEIH 1530
            F  LSLR SMKKF+S +TMLNITN S   PCY+NREII LLSTLGI+DE+FE MQQ ++H
Sbjct: 595  FFNLSLRPSMKKFESKSTMLNITNWSKSQPCYVNREIISLLSTLGIKDEVFESMQQDDMH 654

Query: 1529 LLDQMLVESEAALTVLDRLNGFETKTTKTMLMHGYAPNSEPYISMMLRACRDYQLSDIRS 1350
              D ML   EAAL+VL ++ G +TKT   M++ GY P+SEPY+ M+L+A R  +L+DIR+
Sbjct: 655  ESDGMLTNKEAALSVLGKIGGADTKTASEMVLQGYEPSSEPYLLMILKAHRANRLTDIRT 714

Query: 1349 RCRIFVPKGRLLIGCLDETGTLNYGEVYLRITMKGNERQQATDHTFFDKADQTTAVLIGK 1170
            RC+I V KGR+LIGCLDET TL+YG+VY+RIT K  + Q+ ++  FF   D  TAV++GK
Sbjct: 715  RCKIHVQKGRVLIGCLDETCTLDYGQVYIRIT-KNRKEQKYSEQPFFCNDDGKTAVIVGK 773

Query: 1169 VVVTKNPCLHPGDVRVLQAIYEPGLDEMGLVDCLVFPQKGPRPHPNECSGGDLDGDLYFV 990
            V VTKNPCLHPGDVRVL+A+Y+P LD  GL+DC+VFPQ+G RPHPNECSGGDLDGDL+F+
Sbjct: 774  VAVTKNPCLHPGDVRVLEAVYDPALDARGLIDCVVFPQRGERPHPNECSGGDLDGDLFFI 833

Query: 989  CWDENLIPQKTDEPMDYTGRKPRFLDHAVTEEEIQKFFVDYMVNDTLGTISTTHLVYADK 810
             WD+ LIP+K D PMDYT  +PR +DHAVT EEIQK FV+YM+ND LG IST HL++AD+
Sbjct: 834  TWDDKLIPEKVDAPMDYTATRPRIMDHAVTLEEIQKHFVNYMINDALGVISTAHLIHADR 893

Query: 809  EPRKARSPKCLQLANLHSMAVDYAKTGAPAEMPRILRPKEFPDFMDRWDRPMYMSSGILG 630
             P KARSP+CLQLA LHSMAVD+AKTGAPAEMP  LRP+EFPDFM+RW+RPMY+S+ +LG
Sbjct: 894  NPLKARSPECLQLAALHSMAVDFAKTGAPAEMPVALRPREFPDFMERWERPMYVSTSVLG 953

Query: 629  KLYRATLRKTDIERSEDTCFGVPVQSMYDGDLEVNGFEAFTEVAEEFRDLYSEKLSSLMT 450
            KLYRA LR    E +E      P + +YD DLEV GF+ F + AEE  ++Y+EKL +LMT
Sbjct: 954  KLYRAALRHE--ENAEALLPAGPPRCVYDPDLEVAGFDKFLDTAEEQYEVYAEKLGTLMT 1011

Query: 449  YYGAEHEDEILTGYLRNRSAYLQRDKRRYGEMRDRILLNVRNLQTEVKGWFDSSGSGSDT 270
            YY AEHEDEILTG +RN+  YL+RD +RY EM+DRI+  V  L  EV+GW   +    D 
Sbjct: 1012 YYSAEHEDEILTGNIRNKLVYLRRDNKRYFEMKDRIIAAVDALHAEVRGWL-RARKEDDA 1070

Query: 269  AKMASACYHVTYHPNYYSASNFLSFPWIFSD 177
            +K+ASA YHVTYHP+      F SFPW+  D
Sbjct: 1071 SKLASAWYHVTYHPDRRGEKRFWSFPWVACD 1101