BLASTX nr result

ID: Dioscorea21_contig00003577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003577
         (814 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]    431   e-119
emb|CBI35841.3| unnamed protein product [Vitis vinifera]              421   e-116
ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]      421   e-116
ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa...   421   e-115
ref|XP_003627354.1| RNA-binding protein [Medicago truncatula] gi...   420   e-115

>ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
          Length = 422

 Score =  431 bits (1109), Expect = e-119
 Identities = 214/272 (78%), Positives = 231/272 (84%), Gaps = 2/272 (0%)
 Frame = +1

Query: 4   YYDRRFAALAIMTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDAALFA 183
           Y+DRR AALAI++LNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDA LFA
Sbjct: 101 YFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFA 160

Query: 184 CFSAYQTCSDARVMWDQKTGRSRGFGFVSFRSQQDAQNAINEQTGKWLCSRQIRCNWATK 363
           CFS Y +CSDARVMWDQKTGRSRGFGFVSFR+QQDAQ++IN+ TGKWL SRQIRCNWATK
Sbjct: 161 CFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSSINDLTGKWLGSRQIRCNWATK 220

Query: 364 GAGTNEDKLNSDSKSVVELTNGSSEDGQETANDDAPENNPQYTTVYVGNLAPEVTQPDLH 543
           GAG NE+K NSD+KSVVELTNGSSEDG+ET+N DAPENNPQYTTVYVGNLAPEVTQ DLH
Sbjct: 221 GAGGNEEKQNSDAKSVVELTNGSSEDGKETSNSDAPENNPQYTTVYVGNLAPEVTQLDLH 280

Query: 544 RFFHALDAGAIEEVRLQRDKGFGFVRYSTHSEAARAIQMGNAR-IFCGKPIKCSWGSK-X 717
           R FHAL AG +EEVR+QRDKGFGFVRYSTH+EAA AIQMGNA+ + CGKPIKCSWGSK  
Sbjct: 281 RHFHALGAGVMEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSLLCGKPIKCSWGSKPT 340

Query: 718 XXXXXXXXXXXXXXXXXXXXXXTDLLAYERSL 813
                                 TDLLAYER L
Sbjct: 341 PPGTASNPLPPPAAASLPGLSATDLLAYERQL 372


>emb|CBI35841.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  421 bits (1083), Expect = e-116
 Identities = 208/272 (76%), Positives = 229/272 (84%), Gaps = 2/272 (0%)
 Frame = +1

Query: 4   YYDRRFAALAIMTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDAALFA 183
           Y+DRR AALAI++LNGRHLFGQPIKVNWAYASGQREDTSGH+NIFVGDLSPEVTDA LFA
Sbjct: 84  YFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFA 143

Query: 184 CFSAYQTCSDARVMWDQKTGRSRGFGFVSFRSQQDAQNAINEQTGKWLCSRQIRCNWATK 363
           CFS + +CSDARVMWDQKTGRSRGFGFVSFR+QQDAQ+AIN+ TGKWL SRQIRCNWATK
Sbjct: 144 CFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWLGSRQIRCNWATK 203

Query: 364 GAGTNEDKLNSDSKSVVELTNGSSEDGQETANDDAPENNPQYTTVYVGNLAPEVTQPDLH 543
           GAG+N+DK +SD+KSVVELTNGSSEDG+ETA ++AP+NNPQYTTVYVGNLAPEVTQ DLH
Sbjct: 204 GAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVYVGNLAPEVTQLDLH 263

Query: 544 RFFHALDAGAIEEVRLQRDKGFGFVRYSTHSEAARAIQMGNAR-IFCGKPIKCSWGSK-X 717
           R FH   AG IEEVR+QRDKGFGFVRY+TH+EAA AIQMGN + I CGKPIKCSWGSK  
Sbjct: 264 RHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSILCGKPIKCSWGSKPT 323

Query: 718 XXXXXXXXXXXXXXXXXXXXXXTDLLAYERSL 813
                                 TDLLAYER L
Sbjct: 324 PPGTSSNPLPPPAAAPLPGLSATDLLAYERQL 355


>ref|XP_002270823.1| PREDICTED: nucleolysin TIAR [Vitis vinifera]
          Length = 420

 Score =  421 bits (1083), Expect = e-116
 Identities = 208/272 (76%), Positives = 229/272 (84%), Gaps = 2/272 (0%)
 Frame = +1

Query: 4   YYDRRFAALAIMTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDAALFA 183
           Y+DRR AALAI++LNGRHLFGQPIKVNWAYASGQREDTSGH+NIFVGDLSPEVTDA LFA
Sbjct: 97  YFDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFA 156

Query: 184 CFSAYQTCSDARVMWDQKTGRSRGFGFVSFRSQQDAQNAINEQTGKWLCSRQIRCNWATK 363
           CFS + +CSDARVMWDQKTGRSRGFGFVSFR+QQDAQ+AIN+ TGKWL SRQIRCNWATK
Sbjct: 157 CFSVFPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDITGKWLGSRQIRCNWATK 216

Query: 364 GAGTNEDKLNSDSKSVVELTNGSSEDGQETANDDAPENNPQYTTVYVGNLAPEVTQPDLH 543
           GAG+N+DK +SD+KSVVELTNGSSEDG+ETA ++AP+NNPQYTTVYVGNLAPEVTQ DLH
Sbjct: 217 GAGSNDDKQSSDAKSVVELTNGSSEDGKETATNEAPDNNPQYTTVYVGNLAPEVTQLDLH 276

Query: 544 RFFHALDAGAIEEVRLQRDKGFGFVRYSTHSEAARAIQMGNAR-IFCGKPIKCSWGSK-X 717
           R FH   AG IEEVR+QRDKGFGFVRY+TH+EAA AIQMGN + I CGKPIKCSWGSK  
Sbjct: 277 RHFHTFGAGVIEEVRVQRDKGFGFVRYNTHAEAALAIQMGNTQSILCGKPIKCSWGSKPT 336

Query: 718 XXXXXXXXXXXXXXXXXXXXXXTDLLAYERSL 813
                                 TDLLAYER L
Sbjct: 337 PPGTSSNPLPPPAAAPLPGLSATDLLAYERQL 368


>ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
           gi|449480481|ref|XP_004155906.1| PREDICTED: nucleolysin
           TIAR-like [Cucumis sativus]
          Length = 422

 Score =  421 bits (1081), Expect = e-115
 Identities = 204/271 (75%), Positives = 226/271 (83%), Gaps = 1/271 (0%)
 Frame = +1

Query: 4   YYDRRFAALAIMTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDAALFA 183
           Y+DRR AA+AI++LNGRHLFGQPIKVNWAYASGQREDTSGH+NIFVGDLSPEVTD+ LFA
Sbjct: 98  YFDRRSAAMAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDSTLFA 157

Query: 184 CFSAYQTCSDARVMWDQKTGRSRGFGFVSFRSQQDAQNAINEQTGKWLCSRQIRCNWATK 363
           CFS + +CSDARVMWDQKTGRSRGFGFVSFR+QQDAQ+AIN+ TGKWL SRQIRCNWATK
Sbjct: 158 CFSVFSSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 217

Query: 364 GAGTNEDKLNSDSKSVVELTNGSSEDGQETANDDAPENNPQYTTVYVGNLAPEVTQPDLH 543
           GAG+N+DK +SD KS+ ELTNGSSEDG+ET + DAPENNPQYTTVYVGNLAPE TQ DLH
Sbjct: 218 GAGSNDDKQSSDVKSIAELTNGSSEDGKETVSSDAPENNPQYTTVYVGNLAPEATQVDLH 277

Query: 544 RFFHALDAGAIEEVRLQRDKGFGFVRYSTHSEAARAIQMGNARIF-CGKPIKCSWGSKXX 720
           R FH+L AG IEEVR+QRDKGFGFVRYSTH+EAA AIQMGN + F CGK IKCSWGSK  
Sbjct: 278 RHFHSLGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKPT 337

Query: 721 XXXXXXXXXXXXXXXXXXXXXTDLLAYERSL 813
                                +DLLAYER L
Sbjct: 338 PPGTISNPLPPPAAAPMGLSTSDLLAYERQL 368


>ref|XP_003627354.1| RNA-binding protein [Medicago truncatula]
           gi|355521376|gb|AET01830.1| RNA-binding protein
           [Medicago truncatula]
          Length = 389

 Score =  420 bits (1079), Expect = e-115
 Identities = 211/272 (77%), Positives = 226/272 (83%), Gaps = 2/272 (0%)
 Frame = +1

Query: 4   YYDRRFAALAIMTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDAALFA 183
           Y+DRR AALAI+TLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDA LFA
Sbjct: 68  YFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATLFA 127

Query: 184 CFSAYQTCSDARVMWDQKTGRSRGFGFVSFRSQQDAQNAINEQTGKWLCSRQIRCNWATK 363
           CFS YQ+CSDARVMWDQKTGRSRGFGFVSFRSQQDAQ+AIN+ TGKWL SRQIRCNWATK
Sbjct: 128 CFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATK 187

Query: 364 GAGTNEDKLNSDSKSVVELTNGSSEDGQETANDDAPENNPQYTTVYVGNLAPEVTQPDLH 543
           GAG  E+K NSDSKSVVELTNGSSEDG+E +++D PENNPQYTTVYVGNL  E TQ DLH
Sbjct: 188 GAGGIEEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLDLH 247

Query: 544 RFFHALDAGAIEEVRLQRDKGFGFVRYSTHSEAARAIQMGNARIF-CGKPIKCSWGSK-X 717
           R FHAL AG IEEVR+QRDKGFGFVRYSTH+EAA AIQMGNA+ + CGK IKCSWGSK  
Sbjct: 248 RHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKCSWGSKPT 307

Query: 718 XXXXXXXXXXXXXXXXXXXXXXTDLLAYERSL 813
                                 TD+LAYER L
Sbjct: 308 PPGTASNPLPPPAAAPLPGLSATDILAYERQL 339


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