BLASTX nr result

ID: Dioscorea21_contig00003576 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003576
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis...   110   9e-23
ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis...   110   9e-23
ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]    105   3e-21
ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa...   105   4e-21
ref|XP_004157970.1| PREDICTED: uncharacterized protein LOC101232...   105   5e-21

>ref|XP_002276983.1| PREDICTED: nucleolysin TIAR isoform 1 [Vitis vinifera]
          Length = 429

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/58 (87%), Positives = 54/58 (93%)
 Frame = +3

Query: 3   HRFFHALDAGAIEEVRLQRDKGFGFVRYSTHSEAARAIQMGNARIFCGKPIKCSWGSK 176
           HR FHAL AGAIE+VR+QRDKGFGFVRYSTH+EAA AIQMGNARI CGKPIKCSWGSK
Sbjct: 284 HRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIKCSWGSK 341


>ref|XP_002277008.1| PREDICTED: nucleolysin TIAR isoform 2 [Vitis vinifera]
          Length = 426

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/58 (87%), Positives = 54/58 (93%)
 Frame = +3

Query: 3   HRFFHALDAGAIEEVRLQRDKGFGFVRYSTHSEAARAIQMGNARIFCGKPIKCSWGSK 176
           HR FHAL AGAIE+VR+QRDKGFGFVRYSTH+EAA AIQMGNARI CGKPIKCSWGSK
Sbjct: 281 HRHFHALGAGAIEDVRVQRDKGFGFVRYSTHAEAALAIQMGNARILCGKPIKCSWGSK 338


>ref|XP_003528601.1| PREDICTED: nucleolysin TIAR-like [Glycine max]
          Length = 422

 Score =  105 bits (263), Expect = 3e-21
 Identities = 57/93 (61%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   HRFFHALDAGAIEEVRLQRDKGFGFVRYSTHSEAARAIQMGNAR-IFCGKPIKCSWGSK- 176
           HR FHAL AG +EEVR+QRDKGFGFVRYSTH+EAA AIQMGNA+ + CGKPIKCSWGSK 
Sbjct: 280 HRHFHALGAGVMEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSLLCGKPIKCSWGSKP 339

Query: 177 XXXXXXXXXXXXXXXXXXXXXXXTDLLAYERSL 275
                                  TDLLAYER L
Sbjct: 340 TPPGTASNPLPPPAAASLPGLSATDLLAYERQL 372


>ref|XP_004141717.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
           gi|449480481|ref|XP_004155906.1| PREDICTED: nucleolysin
           TIAR-like [Cucumis sativus]
          Length = 422

 Score =  105 bits (262), Expect = 4e-21
 Identities = 55/92 (59%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
 Frame = +3

Query: 3   HRFFHALDAGAIEEVRLQRDKGFGFVRYSTHSEAARAIQMGNARIF-CGKPIKCSWGSKX 179
           HR FH+L AG IEEVR+QRDKGFGFVRYSTH+EAA AIQMGN + F CGK IKCSWGSK 
Sbjct: 277 HRHFHSLGAGVIEEVRIQRDKGFGFVRYSTHAEAALAIQMGNTQSFLCGKQIKCSWGSKP 336

Query: 180 XXXXXXXXXXXXXXXXXXXXXXTDLLAYERSL 275
                                 +DLLAYER L
Sbjct: 337 TPPGTISNPLPPPAAAPMGLSTSDLLAYERQL 368


>ref|XP_004157970.1| PREDICTED: uncharacterized protein LOC101232331 [Cucumis sativus]
          Length = 343

 Score =  105 bits (261), Expect = 5e-21
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = +3

Query: 3   HRFFHALDAGAIEEVRLQRDKGFGFVRYSTHSEAARAIQMGNARIFCGKPIKCSWGSK 176
           HR+FHAL AG IE+VR+QRDKGFGFVRYST++EAA AIQ GNAR+ CGKPIKCSWGSK
Sbjct: 192 HRYFHALGAGTIEDVRVQRDKGFGFVRYSTNAEAALAIQTGNARVVCGKPIKCSWGSK 249


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