BLASTX nr result

ID: Dioscorea21_contig00003566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003566
         (1771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]   489   e-135
emb|CBI31778.3| unnamed protein product [Vitis vinifera]              488   e-135
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   488   e-135
ref|XP_004162573.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   483   e-134
ref|XP_004149532.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   483   e-134

>emb|CAN60235.1| hypothetical protein VITISV_028850 [Vitis vinifera]
          Length = 666

 Score =  489 bits (1259), Expect = e-135
 Identities = 246/380 (64%), Positives = 305/380 (80%), Gaps = 2/380 (0%)
 Frame = -2

Query: 1578 LEISKLGISDQIVEALSRRGITELFPIQRAVLEPAMEGRDMIGRAITGSGKTLAFGIPIL 1399
            LEISKLGI+ +IV AL+ +GIT+LFPIQRAVLEPAM+GRDMIGRA TG+GKTLAFGIPI+
Sbjct: 115  LEISKLGIAQEIVSALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 174

Query: 1398 XXXXXXXXXXXXXQVPSALVLAPTRELARQVQREFEVSAPGLSSTCLYGGVPIMNQVRSL 1219
                         + P ALVLAPTRELARQV++EF  SAP L + C+YGG PI  Q+ SL
Sbjct: 175  DKVIQYNAKHGRGRNPLALVLAPTRELARQVEKEFXESAPNLDTLCVYGGTPISRQMNSL 234

Query: 1218 EYGMDIVVGTPGRIIDLVQRGALDLSEVKFVVLDEADQMLAVGFQEDVECILSHLPARRQ 1039
            +YG+D+VVGTPGRIIDL++RGAL+LSEV+FVVLDEADQMLAVGF+EDVE IL  LP  RQ
Sbjct: 235  DYGVDVVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQ 294

Query: 1038 CMLFSATMPSWVNDLSRKYLRNPLVIDLVGETDQKLADGISLYSVASTSLNKQNLLPTLI 859
             M+FSATMPSW+  L++KYL+NPL IDLVG++DQKLA+GISLYS+AS    K +++  LI
Sbjct: 295  SMMFSATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLI 354

Query: 858  SRYAEGGKSIIFTRTKIDAESLSRSMRSIIGSRPLHGNMQQMHRDKTLAAFRSGKFNVLV 679
            + +A+GGK I+FT+TK DA+ L+ +M        LHG++ Q  R++TL+ FR G FNVLV
Sbjct: 355  TEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLV 414

Query: 678  ATDVAARGLDIPNVDLVVHFEMPNTSEIFVHRSGRTGRAGNKGTAIMMFTERERHAVRTI 499
            ATDVAARGLDIPNVDL++H+E+PN+SEIFVHRSGRTGRAG KGTAI+++ E++   VR I
Sbjct: 415  ATDVAARGLDIPNVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFI 474

Query: 498  ERELGCKFKELH--GITGGS 445
            ER++GCKF EL    I GGS
Sbjct: 475  ERDIGCKFSELPRIAIEGGS 494


>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score =  488 bits (1256), Expect = e-135
 Identities = 246/380 (64%), Positives = 305/380 (80%), Gaps = 2/380 (0%)
 Frame = -2

Query: 1578 LEISKLGISDQIVEALSRRGITELFPIQRAVLEPAMEGRDMIGRAITGSGKTLAFGIPIL 1399
            LEISKLGI+ +IV AL+ +GIT+LFPIQRAVLEPAM+GRDMIGRA TG+GKTLAFGIPI+
Sbjct: 115  LEISKLGIAQEIVSALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 174

Query: 1398 XXXXXXXXXXXXXQVPSALVLAPTRELARQVQREFEVSAPGLSSTCLYGGVPIMNQVRSL 1219
                         + P ALVLAPTRELARQV++EF  SAP L + C+YGG PI  Q+ SL
Sbjct: 175  DKVIQYNAKHGRGRNPLALVLAPTRELARQVEKEFCESAPNLDTLCVYGGTPISRQMNSL 234

Query: 1218 EYGMDIVVGTPGRIIDLVQRGALDLSEVKFVVLDEADQMLAVGFQEDVECILSHLPARRQ 1039
            +YG+D+VVGTPGRIIDL++RGAL+LSEV+FVVLDEADQMLAVGF+EDVE IL  LP  RQ
Sbjct: 235  DYGVDVVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQ 294

Query: 1038 CMLFSATMPSWVNDLSRKYLRNPLVIDLVGETDQKLADGISLYSVASTSLNKQNLLPTLI 859
             M+FSATMPSW+  L++KYL+NPL IDLVG++DQKLA+GISLYS+AS    K +++  LI
Sbjct: 295  SMMFSATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLI 354

Query: 858  SRYAEGGKSIIFTRTKIDAESLSRSMRSIIGSRPLHGNMQQMHRDKTLAAFRSGKFNVLV 679
            + +A+GGK I+FT+TK DA+ L+ +M        LHG++ Q  R++TL+ FR G FNVLV
Sbjct: 355  TEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLV 414

Query: 678  ATDVAARGLDIPNVDLVVHFEMPNTSEIFVHRSGRTGRAGNKGTAIMMFTERERHAVRTI 499
            ATDVAARGLDIPNVDL++H+E+PN+SEIFVHRSGRTGRAG KGTAI+++ E++   VR I
Sbjct: 415  ATDVAARGLDIPNVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFI 474

Query: 498  ERELGCKFKELH--GITGGS 445
            ER++GCKF EL    I GGS
Sbjct: 475  ERDIGCKFSELPRIAIEGGS 494


>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
            vinifera]
          Length = 666

 Score =  488 bits (1256), Expect = e-135
 Identities = 246/380 (64%), Positives = 305/380 (80%), Gaps = 2/380 (0%)
 Frame = -2

Query: 1578 LEISKLGISDQIVEALSRRGITELFPIQRAVLEPAMEGRDMIGRAITGSGKTLAFGIPIL 1399
            LEISKLGI+ +IV AL+ +GIT+LFPIQRAVLEPAM+GRDMIGRA TG+GKTLAFGIPI+
Sbjct: 115  LEISKLGIAQEIVSALANKGITKLFPIQRAVLEPAMQGRDMIGRARTGTGKTLAFGIPIM 174

Query: 1398 XXXXXXXXXXXXXQVPSALVLAPTRELARQVQREFEVSAPGLSSTCLYGGVPIMNQVRSL 1219
                         + P ALVLAPTRELARQV++EF  SAP L + C+YGG PI  Q+ SL
Sbjct: 175  DKVIQYNAKHGRGRNPLALVLAPTRELARQVEKEFCESAPNLDTLCVYGGTPISRQMNSL 234

Query: 1218 EYGMDIVVGTPGRIIDLVQRGALDLSEVKFVVLDEADQMLAVGFQEDVECILSHLPARRQ 1039
            +YG+D+VVGTPGRIIDL++RGAL+LSEV+FVVLDEADQMLAVGF+EDVE IL  LP  RQ
Sbjct: 235  DYGVDVVVGTPGRIIDLIKRGALNLSEVQFVVLDEADQMLAVGFEEDVEMILEKLPQNRQ 294

Query: 1038 CMLFSATMPSWVNDLSRKYLRNPLVIDLVGETDQKLADGISLYSVASTSLNKQNLLPTLI 859
             M+FSATMPSW+  L++KYL+NPL IDLVG++DQKLA+GISLYS+AS    K +++  LI
Sbjct: 295  SMMFSATMPSWIRKLTQKYLKNPLTIDLVGDSDQKLAEGISLYSIASEMYEKASIVGPLI 354

Query: 858  SRYAEGGKSIIFTRTKIDAESLSRSMRSIIGSRPLHGNMQQMHRDKTLAAFRSGKFNVLV 679
            + +A+GGK I+FT+TK DA+ L+ +M        LHG++ Q  R++TL+ FR G FNVLV
Sbjct: 355  TEHAKGGKCIVFTQTKRDADRLAYAMARNFRCEALHGDISQSQRERTLSGFRDGHFNVLV 414

Query: 678  ATDVAARGLDIPNVDLVVHFEMPNTSEIFVHRSGRTGRAGNKGTAIMMFTERERHAVRTI 499
            ATDVAARGLDIPNVDL++H+E+PN+SEIFVHRSGRTGRAG KGTAI+++ E++   VR I
Sbjct: 415  ATDVAARGLDIPNVDLIIHYELPNSSEIFVHRSGRTGRAGKKGTAILIYAEQQARTVRFI 474

Query: 498  ERELGCKFKELH--GITGGS 445
            ER++GCKF EL    I GGS
Sbjct: 475  ERDIGCKFSELPRIAIEGGS 494


>ref|XP_004162573.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis
            sativus]
          Length = 611

 Score =  483 bits (1244), Expect = e-134
 Identities = 248/400 (62%), Positives = 309/400 (77%), Gaps = 5/400 (1%)
 Frame = -2

Query: 1614 AVLQLDHAPSSS-----LEISKLGISDQIVEALSRRGITELFPIQRAVLEPAMEGRDMIG 1450
            AV   D A SS      LEI KLGI+ +IV AL+R+GIT+LFPIQRAVLEPAM+GRDMIG
Sbjct: 90   AVEDYDCASSSKSGDEGLEIGKLGIAPEIVSALARKGITKLFPIQRAVLEPAMQGRDMIG 149

Query: 1449 RAITGSGKTLAFGIPILXXXXXXXXXXXXXQVPSALVLAPTRELARQVQREFEVSAPGLS 1270
            RA TG+GKTLAFGIPIL             + P ALVLAPTRELARQV++EF+ +AP L 
Sbjct: 150  RARTGTGKTLAFGIPILDKLIQFNAKNGRGRNPLALVLAPTRELARQVEKEFQEAAPSLD 209

Query: 1269 STCLYGGVPIMNQVRSLEYGMDIVVGTPGRIIDLVQRGALDLSEVKFVVLDEADQMLAVG 1090
            + C+YGG PI  Q+R L+YG+DI VGTPGR+IDL+ RG+L+LSEV+FVVLDEADQML VG
Sbjct: 210  TICVYGGAPISQQMRQLDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVG 269

Query: 1089 FQEDVECILSHLPARRQCMLFSATMPSWVNDLSRKYLRNPLVIDLVGETDQKLADGISLY 910
            FQEDVE IL  LP +RQ M+FSATMPSW+  LSR YL NPL IDLVG++DQKLADGISL+
Sbjct: 270  FQEDVEKILERLPQKRQSMMFSATMPSWILKLSRNYLNNPLTIDLVGDSDQKLADGISLF 329

Query: 909  SVASTSLNKQNLLPTLISRYAEGGKSIIFTRTKIDAESLSRSMRSIIGSRPLHGNMQQMH 730
            SV S +  K +++  LI+ + +GGK IIFT+TK DA+ L+ +M   +    LHG++ Q  
Sbjct: 330  SVVSETYGKASIIGPLITEHGKGGKCIIFTQTKRDADRLAYAMGRNLRCEALHGDISQSQ 389

Query: 729  RDKTLAAFRSGKFNVLVATDVAARGLDIPNVDLVVHFEMPNTSEIFVHRSGRTGRAGNKG 550
            R++TL+ FR G+FNVLVATDVAARGLDIPNVDLV+HFE+PN +EIFVHRSGRTGRAG KG
Sbjct: 390  RERTLSGFRDGRFNVLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKG 449

Query: 549  TAIMMFTERERHAVRTIERELGCKFKELHGITGGSDRRID 430
            + I+++++ +  A+R IERE+GC+F EL  IT  +   +D
Sbjct: 450  SVILIYSQDQTRAIRMIEREVGCRFNELPRITVEAGAHVD 489


>ref|XP_004149532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Cucumis
            sativus]
          Length = 593

 Score =  483 bits (1244), Expect = e-134
 Identities = 248/400 (62%), Positives = 309/400 (77%), Gaps = 5/400 (1%)
 Frame = -2

Query: 1614 AVLQLDHAPSSS-----LEISKLGISDQIVEALSRRGITELFPIQRAVLEPAMEGRDMIG 1450
            AV   D A SS      LEI KLGI+ +IV AL+R+GIT+LFPIQRAVLEPAM+GRDMIG
Sbjct: 90   AVEDYDCASSSKSGDEGLEIGKLGIAPEIVSALARKGITKLFPIQRAVLEPAMQGRDMIG 149

Query: 1449 RAITGSGKTLAFGIPILXXXXXXXXXXXXXQVPSALVLAPTRELARQVQREFEVSAPGLS 1270
            RA TG+GKTLAFGIPIL             + P ALVLAPTRELARQV++EF+ +AP L 
Sbjct: 150  RARTGTGKTLAFGIPILDKLIQFNAKNGRGRNPLALVLAPTRELARQVEKEFQEAAPSLD 209

Query: 1269 STCLYGGVPIMNQVRSLEYGMDIVVGTPGRIIDLVQRGALDLSEVKFVVLDEADQMLAVG 1090
            + C+YGG PI  Q+R L+YG+DI VGTPGR+IDL+ RG+L+LSEV+FVVLDEADQML VG
Sbjct: 210  TICVYGGAPISQQMRQLDYGVDIAVGTPGRLIDLLNRGSLNLSEVQFVVLDEADQMLQVG 269

Query: 1089 FQEDVECILSHLPARRQCMLFSATMPSWVNDLSRKYLRNPLVIDLVGETDQKLADGISLY 910
            FQEDVE IL  LP +RQ M+FSATMPSW+  LSR YL NPL IDLVG++DQKLADGISL+
Sbjct: 270  FQEDVEKILERLPQKRQSMMFSATMPSWILKLSRNYLNNPLTIDLVGDSDQKLADGISLF 329

Query: 909  SVASTSLNKQNLLPTLISRYAEGGKSIIFTRTKIDAESLSRSMRSIIGSRPLHGNMQQMH 730
            SV S +  K +++  LI+ + +GGK IIFT+TK DA+ L+ +M   +    LHG++ Q  
Sbjct: 330  SVVSETYGKASIIGPLITEHGKGGKCIIFTQTKRDADRLAYAMGRNLRCEALHGDISQSQ 389

Query: 729  RDKTLAAFRSGKFNVLVATDVAARGLDIPNVDLVVHFEMPNTSEIFVHRSGRTGRAGNKG 550
            R++TL+ FR G+FNVLVATDVAARGLDIPNVDLV+HFE+PN +EIFVHRSGRTGRAG KG
Sbjct: 390  RERTLSGFRDGRFNVLVATDVAARGLDIPNVDLVIHFELPNNTEIFVHRSGRTGRAGKKG 449

Query: 549  TAIMMFTERERHAVRTIERELGCKFKELHGITGGSDRRID 430
            + I+++++ +  A+R IERE+GC+F EL  IT  +   +D
Sbjct: 450  SVILIYSQDQTRAIRMIEREVGCRFNELPRITVEAGAHVD 489


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