BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003534
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]   489   e-136
ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera...   486   e-135
ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max]   483   e-134
ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatul...   480   e-133
ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group] g...   479   e-133

>ref|XP_003535521.1| PREDICTED: pumilio homolog 4-like [Glycine max]
          Length = 983

 Score =  489 bits (1258), Expect = e-136
 Identities = 236/283 (83%), Positives = 264/283 (93%)
 Frame = -1

Query: 1111 FGNYVIQKFFEHGTDVQRKQLASQLTGHVLPLSLQMYGCRVIQKALEVVDVDLQTKMVLE 932
            FGNYVIQKFFEHGT+ QRK+LA+QLTGHVLPLSLQMYGCRVIQKALEVVDVD Q +MV E
Sbjct: 701  FGNYVIQKFFEHGTESQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQGQMVSE 760

Query: 931  LEGSIMKCVRDQNGNHVIQKCIERVPQEKIQFIIKTFYGQVVTLSTHPYGCRVIQRVLEH 752
            L G+IMKCVRDQNGNHVIQKCIE VPQ+KIQFI+ +FYGQVV LSTHPYGCRVIQRVLEH
Sbjct: 761  LNGAIMKCVRDQNGNHVIQKCIECVPQDKIQFIVSSFYGQVVALSTHPYGCRVIQRVLEH 820

Query: 751  CDDPETQRIMMEEILESVCTLTQDQYGNYVVQHVLQHGKPEERSLIISKLTGQIVKMSQQ 572
            CDD  TQ+I+MEEI++SV TL QDQYGNYV+QH+++HGKP ER+ IISKL GQIVKMSQQ
Sbjct: 821  CDDQNTQQIIMEEIMQSVSTLAQDQYGNYVIQHIVEHGKPHERTTIISKLAGQIVKMSQQ 880

Query: 571  KFASNVIEKCLAYGTPEERQLLIDEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQN 392
            KFASNVIEKCLA+G+PEERQ+L++EMLGT+DENEPLQAMMKD FGNYVVQKVLETCDD++
Sbjct: 881  KFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVLETCDDRS 940

Query: 391  RELILSRIKVHLNALKKYTYGKHIVARVEKLIATGERRIGIAA 263
             ELILSRIKVHLNALK+YTYGKHIV+RVEKLI TGERRIG+ A
Sbjct: 941  LELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGERRIGLLA 983



 Score =  117 bits (294), Expect = 4e-24
 Identities = 75/255 (29%), Positives = 131/255 (51%), Gaps = 3/255 (1%)
 Frame = -1

Query: 1030 HVLPLSLQMYGCRVIQKALEVVDVDLQTKMVLELEGSIMKCVRDQNGNHVIQKCIERVPQ 851
            HV+  S   YG R IQ+ LE   V+ +TK+  E+       + D  GN+VIQK  E   +
Sbjct: 656  HVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTE 715

Query: 850  EKIQFIIKTFYGQVVTLSTHPYGCRVIQRVLEHCDDPETQRIMMEEILESVCTLTQDQYG 671
             + + +     G V+ LS   YGCRVIQ+ LE   D + Q  M+ E+  ++    +DQ G
Sbjct: 716  SQRKELANQLTGHVLPLSLQMYGCRVIQKALE-VVDVDQQGQMVSELNGAIMKCVRDQNG 774

Query: 670  NYVVQHVLQHGKPEERSLIISKLTGQIVKMSQQKFASNVIEKCLAYGTPEERQLLIDEML 491
            N+V+Q  ++    ++   I+S   GQ+V +S   +   VI++ L +   +  Q +I E +
Sbjct: 775  NHVIQKCIECVPQDKIQFIVSSFYGQVVALSTHPYGCRVIQRVLEHCDDQNTQQIIMEEI 834

Query: 490  GTTDENEPLQAMMKDQFGNYVVQKVLETCDDQNRELILSRIKVHLNALKKYTYGKHIVAR 311
                  + +  + +DQ+GNYV+Q ++E      R  I+S++   +  + +  +  ++   
Sbjct: 835  -----MQSVSTLAQDQYGNYVIQHIVEHGKPHERTTIISKLAGQIVKMSQQKFASNV--- 886

Query: 310  VEKLIATG---ERRI 275
            +EK +A G   ER+I
Sbjct: 887  IEKCLAFGSPEERQI 901


>ref|XP_002273503.1| PREDICTED: pumilio homolog 4 [Vitis vinifera]
            gi|296085990|emb|CBI31431.3| unnamed protein product
            [Vitis vinifera]
          Length = 1026

 Score =  486 bits (1252), Expect = e-135
 Identities = 233/283 (82%), Positives = 262/283 (92%)
 Frame = -1

Query: 1111 FGNYVIQKFFEHGTDVQRKQLASQLTGHVLPLSLQMYGCRVIQKALEVVDVDLQTKMVLE 932
            FGNYVIQKFFEHGT+ QR+ LAS+LTGH+LPLSLQMYGCRVIQKALEVVDVD QT+MV E
Sbjct: 740  FGNYVIQKFFEHGTESQRQALASELTGHILPLSLQMYGCRVIQKALEVVDVDRQTQMVAE 799

Query: 931  LEGSIMKCVRDQNGNHVIQKCIERVPQEKIQFIIKTFYGQVVTLSTHPYGCRVIQRVLEH 752
            L+GS+MKCVRDQNGNHVIQKCIE VPQ++IQFII +FYGQVV+LSTHPYGCRVIQRVLEH
Sbjct: 800  LDGSVMKCVRDQNGNHVIQKCIECVPQDRIQFIISSFYGQVVSLSTHPYGCRVIQRVLEH 859

Query: 751  CDDPETQRIMMEEILESVCTLTQDQYGNYVVQHVLQHGKPEERSLIISKLTGQIVKMSQQ 572
            CDD  TQ+I+M+EI++SVC L  DQYGNYV+QHVLQ+GKP ERS IISKL GQIVKMSQQ
Sbjct: 860  CDDSSTQQIIMDEIMQSVCILAHDQYGNYVIQHVLQYGKPHERSAIISKLAGQIVKMSQQ 919

Query: 571  KFASNVIEKCLAYGTPEERQLLIDEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQN 392
            KFASNV+EKCL +G PEERQLL+ EMLG+TDENEPLQ MMKD FGNYVVQKV+ETCDDQ 
Sbjct: 920  KFASNVVEKCLTFGGPEERQLLVTEMLGSTDENEPLQIMMKDPFGNYVVQKVIETCDDQT 979

Query: 391  RELILSRIKVHLNALKKYTYGKHIVARVEKLIATGERRIGIAA 263
            RELILSRIKVHLN LK+YTYGKHIV+RVEKLIATGERR+G+++
Sbjct: 980  RELILSRIKVHLNTLKRYTYGKHIVSRVEKLIATGERRMGLSS 1022


>ref|XP_003555443.1| PREDICTED: pumilio homolog 4-like [Glycine max]
          Length = 1000

 Score =  483 bits (1244), Expect = e-134
 Identities = 233/281 (82%), Positives = 262/281 (93%)
 Frame = -1

Query: 1111 FGNYVIQKFFEHGTDVQRKQLASQLTGHVLPLSLQMYGCRVIQKALEVVDVDLQTKMVLE 932
            FGNYVIQKFFEHGTD QRK+LASQLTGHVLPLSLQMYGCRVIQKALEVVD D Q ++V E
Sbjct: 700  FGNYVIQKFFEHGTDSQRKELASQLTGHVLPLSLQMYGCRVIQKALEVVDADQQGQLVSE 759

Query: 931  LEGSIMKCVRDQNGNHVIQKCIERVPQEKIQFIIKTFYGQVVTLSTHPYGCRVIQRVLEH 752
            L G+IMKCVRDQNGNHVIQKCIE VPQ+KIQFI+ +FYGQVV LSTHPYGCRVIQRVLEH
Sbjct: 760  LNGAIMKCVRDQNGNHVIQKCIECVPQDKIQFIVSSFYGQVVLLSTHPYGCRVIQRVLEH 819

Query: 751  CDDPETQRIMMEEILESVCTLTQDQYGNYVVQHVLQHGKPEERSLIISKLTGQIVKMSQQ 572
            CDD  TQ+I+M+EI++SV TL QDQYGNYV+QH+++HGKP ER+ IISKL GQIVKMSQQ
Sbjct: 820  CDDLNTQQIIMDEIMQSVGTLAQDQYGNYVIQHIVEHGKPHERTAIISKLAGQIVKMSQQ 879

Query: 571  KFASNVIEKCLAYGTPEERQLLIDEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQN 392
            KFASNVIEKCLA+G+PEERQ+L++EMLGT+DENEPLQAMMKD FGNYVVQKVLETCDD++
Sbjct: 880  KFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQAMMKDPFGNYVVQKVLETCDDRS 939

Query: 391  RELILSRIKVHLNALKKYTYGKHIVARVEKLIATGERRIGI 269
             ELILSRIKVHLNALK+YTYGKHIV+RVEKLI TGE+RIG+
Sbjct: 940  LELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGEKRIGL 980



 Score =  115 bits (288), Expect = 2e-23
 Identities = 74/256 (28%), Positives = 133/256 (51%), Gaps = 4/256 (1%)
 Frame = -1

Query: 1030 HVLPLSLQMYGCRVIQKALEVVDVDLQTKMVLELEGSIMKCVRDQNGNHVIQKCIERVPQ 851
            HV+  S   YG R IQ+ LE   V+ +TK+  E+       + D  GN+VIQK  E    
Sbjct: 655  HVVQFSTDQYGSRFIQQKLETASVEEKTKIFPEIIPHARALMTDVFGNYVIQKFFEHGTD 714

Query: 850  EKIQFIIKTFYGQVVTLSTHPYGCRVIQRVLEHCDDPETQRIMMEEILESVCTLTQDQYG 671
             + + +     G V+ LS   YGCRVIQ+ LE   D + Q  ++ E+  ++    +DQ G
Sbjct: 715  SQRKELASQLTGHVLPLSLQMYGCRVIQKALE-VVDADQQGQLVSELNGAIMKCVRDQNG 773

Query: 670  NYVVQHVLQHGKPEERSLIISKLTGQIVKMSQQKFASNVIEKCLAY-GTPEERQLLIDEM 494
            N+V+Q  ++    ++   I+S   GQ+V +S   +   VI++ L +      +Q+++DE+
Sbjct: 774  NHVIQKCIECVPQDKIQFIVSSFYGQVVLLSTHPYGCRVIQRVLEHCDDLNTQQIIMDEI 833

Query: 493  LGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQNRELILSRIKVHLNALKKYTYGKHIVA 314
            +      + +  + +DQ+GNYV+Q ++E      R  I+S++   +  + +  +  ++  
Sbjct: 834  M------QSVGTLAQDQYGNYVIQHIVEHGKPHERTAIISKLAGQIVKMSQQKFASNV-- 885

Query: 313  RVEKLIATG---ERRI 275
             +EK +A G   ER+I
Sbjct: 886  -IEKCLAFGSPEERQI 900


>ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
            gi|355480910|gb|AES62113.1| 60S ribosomal protein L4
            [Medicago truncatula]
          Length = 1176

 Score =  480 bits (1235), Expect = e-133
 Identities = 235/290 (81%), Positives = 261/290 (90%), Gaps = 13/290 (4%)
 Frame = -1

Query: 1111 FGNYVIQKFFEHGTDVQRKQLASQLTGHVLPLSLQMYGCRVIQKALEVVDVDLQTKMVLE 932
            FGNYVIQKFFEHGTD QRK+LA+QLTGHVLPLSLQMYGCRVIQKALEVVDVD Q++MV E
Sbjct: 691  FGNYVIQKFFEHGTDSQRKELANQLTGHVLPLSLQMYGCRVIQKALEVVDVDQQSQMVSE 750

Query: 931  LEGSIMKCVRDQNGNHVIQKCIERVPQEKIQFIIKTFYGQVVTLSTHPYGCRVIQRVLEH 752
            L G+IMKCVRDQNGNHVIQKCIE VPQ +IQFII +FYGQVV LSTHPYGCRVIQRVLEH
Sbjct: 751  LSGAIMKCVRDQNGNHVIQKCIESVPQNRIQFIITSFYGQVVALSTHPYGCRVIQRVLEH 810

Query: 751  CDDPETQRIMMEEILESVCTLTQDQYGNYVVQHVLQHGKPEERSLIISKLTGQIVKMSQQ 572
            CDD +TQ I+MEEI++SVCTL QDQYGNYV+QH+L+HGKP ER+++ISKL GQIVKMSQQ
Sbjct: 811  CDDLKTQEIIMEEIMQSVCTLAQDQYGNYVIQHILEHGKPNERTIVISKLAGQIVKMSQQ 870

Query: 571  KFASNVIEKCLAYGTPEERQLLIDEMLGTTDENEPL-------------QAMMKDQFGNY 431
            KFASNVIEKCLA+G+PEERQ+L++EMLGT+DENEPL             QAMMKD FGNY
Sbjct: 871  KFASNVIEKCLAFGSPEERQILVNEMLGTSDENEPLQRFQVNDDMACNMQAMMKDPFGNY 930

Query: 430  VVQKVLETCDDQNRELILSRIKVHLNALKKYTYGKHIVARVEKLIATGER 281
            VVQKVLETCDDQ+ ELILSRIKVHLNALK+YTYGKHIV+RVEKLI TGER
Sbjct: 931  VVQKVLETCDDQSLELILSRIKVHLNALKRYTYGKHIVSRVEKLITTGER 980


>ref|NP_001044782.1| Os01g0844800 [Oryza sativa Japonica Group]
            gi|113534313|dbj|BAF06696.1| Os01g0844800 [Oryza sativa
            Japonica Group] gi|215704672|dbj|BAG94300.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1060

 Score =  479 bits (1234), Expect = e-133
 Identities = 230/283 (81%), Positives = 258/283 (91%)
 Frame = -1

Query: 1111 FGNYVIQKFFEHGTDVQRKQLASQLTGHVLPLSLQMYGCRVIQKALEVVDVDLQTKMVLE 932
            FGNYV+QKFFEHG+  QR++LA QL GHVL LSLQMYGCRVIQKA+EVVD+D +TKMV E
Sbjct: 774  FGNYVVQKFFEHGSAAQRRELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTKMVTE 833

Query: 931  LEGSIMKCVRDQNGNHVIQKCIERVPQEKIQFIIKTFYGQVVTLSTHPYGCRVIQRVLEH 752
            L+G IM+CVRDQNGNHVIQKCIE VP++ IQFII TFYGQVV LSTHPYGCRVIQRVLEH
Sbjct: 834  LDGHIMRCVRDQNGNHVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEH 893

Query: 751  CDDPETQRIMMEEILESVCTLTQDQYGNYVVQHVLQHGKPEERSLIISKLTGQIVKMSQQ 572
            C DP+TQ I+M+EIL+SVC L QDQYGNYVVQHVL+HGKP ERS+II KL GQI++MSQQ
Sbjct: 894  CTDPKTQEIVMDEILQSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQ 953

Query: 571  KFASNVIEKCLAYGTPEERQLLIDEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQN 392
            KFASNV+EKCL +G P ER++LI+EMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQ 
Sbjct: 954  KFASNVVEKCLTFGGPAEREVLINEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQQ 1013

Query: 391  RELILSRIKVHLNALKKYTYGKHIVARVEKLIATGERRIGIAA 263
            RELILSR+KVHL+ALKKYTYGKHIVARVEKL+A GERRIG+ A
Sbjct: 1014 RELILSRVKVHLSALKKYTYGKHIVARVEKLVAAGERRIGLQA 1056



 Score =  119 bits (299), Expect = 1e-24
 Identities = 73/259 (28%), Positives = 134/259 (51%), Gaps = 2/259 (0%)
 Frame = -1

Query: 1045 SQLTGHVLPLSLQMYGCRVIQKALEVVDVDLQTKMVLELEGSIMKCVRDQNGNHVIQKCI 866
            +++  HV+  S   YG R IQ+ LE   V+ +  +  E+    +  + D  GN+V+QK  
Sbjct: 724  AEIASHVVEFSADQYGSRFIQQKLETATVEEKDMVFKEIMPQALSLMTDVFGNYVVQKFF 783

Query: 865  ERVPQEKIQFIIKTFYGQVVTLSTHPYGCRVIQRVLEHCD-DPETQRIMMEEILESVCTL 689
            E     + + +    +G V+ LS   YGCRVIQ+ +E  D D +T+  M+ E+   +   
Sbjct: 784  EHGSAAQRRELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKTK--MVTELDGHIMRC 841

Query: 688  TQDQYGNYVVQHVLQHGKPEERSLIISKLTGQIVKMSQQKFASNVIEKCLAYGT-PEERQ 512
             +DQ GN+V+Q  ++    +    IIS   GQ+V +S   +   VI++ L + T P+ ++
Sbjct: 842  VRDQNGNHVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQRVLEHCTDPKTQE 901

Query: 511  LLIDEMLGTTDENEPLQAMMKDQFGNYVVQKVLETCDDQNRELILSRIKVHLNALKKYTY 332
            +++DE+L      + +  + +DQ+GNYVVQ VLE      R +I+ ++   +  + +  +
Sbjct: 902  IVMDEIL------QSVCMLAQDQYGNYVVQHVLEHGKPHERSVIIEKLAGQIIQMSQQKF 955

Query: 331  GKHIVARVEKLIATGERRI 275
              ++V +        ER +
Sbjct: 956  ASNVVEKCLTFGGPAEREV 974



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 37/182 (20%), Positives = 78/182 (42%), Gaps = 30/182 (16%)
 Frame = -1

Query: 763  VLEHCDDPETQRIMMEEILESVCTLTQDQYGNYVVQHVLQHGKPEERSLIISKLTGQIVK 584
            +L+     + +   + EI   V   + DQYG+  +Q  L+    EE+ ++  ++  Q + 
Sbjct: 709  LLDEFKSNKARSFELAEIASHVVEFSADQYGSRFIQQKLETATVEEKDMVFKEIMPQALS 768

Query: 583  MSQQKFASNVIEKCLAYGTPEERQLLIDEMLG---------------------------- 488
            +    F + V++K   +G+  +R+ L D++ G                            
Sbjct: 769  LMTDVFGNYVVQKFFEHGSAAQRRELADQLFGHVLALSLQMYGCRVIQKAIEVVDLDQKT 828

Query: 487  --TTDENEPLQAMMKDQFGNYVVQKVLETCDDQNRELILSRIKVHLNALKKYTYGKHIVA 314
               T+ +  +   ++DQ GN+V+QK +E   + + + I+S     +  L  + YG  ++ 
Sbjct: 829  KMVTELDGHIMRCVRDQNGNHVIQKCIECVPEDSIQFIISTFYGQVVPLSTHPYGCRVIQ 888

Query: 313  RV 308
            RV
Sbjct: 889  RV 890