BLASTX nr result

ID: Dioscorea21_contig00003516 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00003516
         (1511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276224.1| PREDICTED: uncharacterized protein LOC100260...   526   e-147
ref|XP_002298854.1| predicted protein [Populus trichocarpa] gi|2...   504   e-140
ref|XP_004151387.1| PREDICTED: uncharacterized protein LOC101207...   503   e-140
ref|NP_001060114.1| Os07g0583200 [Oryza sativa Japonica Group] g...   498   e-138
ref|XP_002864399.1| mitochondrial transcription termination fact...   497   e-138

>ref|XP_002276224.1| PREDICTED: uncharacterized protein LOC100260706 [Vitis vinifera]
          Length = 514

 Score =  526 bits (1356), Expect = e-147
 Identities = 286/466 (61%), Positives = 338/466 (72%), Gaps = 29/466 (6%)
 Frame = -1

Query: 1313 GFAVCSSHSNPRILKPNRGYLYD--------DDDRGSELEEYPPFGDDFDLEEFASNRHS 1158
            GF V S+HSNPRILK NR   Y         DD+ G E  ++    +D + EEF ++R  
Sbjct: 48   GFTVLSTHSNPRILKSNRRSRYGQVLSPYDTDDNAGDEDGDWFFDDEDSETEEFDADRKK 107

Query: 1157 DKKPTNFYSLVPNK-RPGYQRPPRKDKVIPA-------KISSRDLSYISGST-------- 1026
                  F S   N  R G +R   +D+ I +        IS  +L   +G          
Sbjct: 108  ------FNSQKGNDTRQGSRRQLEEDQSIRSLKSEGSFNISKGELDVKNGKNTIGSSYHT 161

Query: 1025 --KPNQMDLSTKE---KVEHGKFTLSRFQKLAEELDFDEKWFPLIEYLSTFGLKETHFIS 861
              K    D S      K++  K T +++ +L+EE+D DEKWFPL++YLSTFGLKE+HFI 
Sbjct: 162  FNKSEDYDSSEMHGIGKLKPRKSTENKYCRLSEEIDLDEKWFPLLDYLSTFGLKESHFIQ 221

Query: 860  IYERHMPCLQINLASARERLDFLIGIGVKHRDIKRILLRQPQILEYTIENNLKSHVSFLV 681
            +YERHMP LQIN  SA+ERL++L  +GVKHRDIKRI+LRQPQILEYT+ENNLKSHV+FLV
Sbjct: 222  MYERHMPSLQINACSAQERLEYLSSVGVKHRDIKRIILRQPQILEYTVENNLKSHVAFLV 281

Query: 680  DIGIPQSRIGQIITAAPSLFSYSVELSLKPTIRYLVEEVGIKRSNLSKVIQLSPQILVQR 501
             +GIP SRIG +I AAPSLFSYSVE SLKPT+RYL+EEVGIK+++L KV+QLSPQILVQR
Sbjct: 282  GLGIPDSRIGHVIAAAPSLFSYSVENSLKPTVRYLIEEVGIKKNDLGKVVQLSPQILVQR 341

Query: 500  IDNSWTSRFSFLSKELGAPRESIVKMVTKHPQLLHYSIEDGISPRIDFLRSIGMRDSDIX 321
            IDNSW +R+SFLS+ELGAPR+SIVKMVTKHPQLLHYSIEDG  PRI+FLRSIGMR+SDI 
Sbjct: 342  IDNSWNTRYSFLSRELGAPRDSIVKMVTKHPQLLHYSIEDGFLPRINFLRSIGMRNSDIL 401

Query: 320  XXXXXXXXXXXXXLEDNLKPKYLYLVNDLNNEVKSLTKYPMYLSLSLEQRIRPRHRFLVS 141
                         LEDNLKPKY+YLVN+L NEV SLTKYPMYLSLSL+QRIRPRHRFLV 
Sbjct: 402  KVLTNLTQVLSLSLEDNLKPKYMYLVNELRNEVHSLTKYPMYLSLSLDQRIRPRHRFLVY 461

Query: 140  LKKAPKGPFPLSSLVPTDASFCQQWAGTTLEKYLAFRQSLLLSDLA 3
            LKKAPKGPFPLSS VPTD  FCQQWAGT+L+ YLAFRQ LLL D A
Sbjct: 462  LKKAPKGPFPLSSFVPTDECFCQQWAGTSLDSYLAFRQRLLLKDFA 507


>ref|XP_002298854.1| predicted protein [Populus trichocarpa] gi|222846112|gb|EEE83659.1|
            predicted protein [Populus trichocarpa]
          Length = 448

 Score =  504 bits (1298), Expect = e-140
 Identities = 270/444 (60%), Positives = 322/444 (72%), Gaps = 10/444 (2%)
 Frame = -1

Query: 1304 VCSSHSNPRILKPNR----GYLYDDDDRGSELEEY---PPFGDDFDLEEFASNRHSDKKP 1146
            V S+HSN +IL P R    G+ +   D    L+++     F +  D E     R + +K 
Sbjct: 5    VLSTHSNAKILNPKRKSRYGHTFSLYDTDIGLDDWLLDDEFAEPVDFEVDGKKRVNSQKK 64

Query: 1145 TNFYSLVPNKRPGYQR--PPRKDKVIPAKISSRDLSYISGSTKP-NQMDLSTKEKVEHGK 975
            T+        R G QR    R  K    K    +       TK  +  D++ + K+  GK
Sbjct: 65   TS-------TREGGQRLFNSRTSKNTREKSMVGNFYGTKTRTKEADSSDINGQGKLMTGK 117

Query: 974  FTLSRFQKLAEELDFDEKWFPLIEYLSTFGLKETHFISIYERHMPCLQINLASARERLDF 795
             T  R+ KL+EE+D DEKW PL++YLSTFGLKE+HFI IYERHMP LQIN+ SARERL++
Sbjct: 118  STEDRYPKLSEEIDLDEKWLPLLDYLSTFGLKESHFIQIYERHMPSLQINVCSARERLEY 177

Query: 794  LIGIGVKHRDIKRILLRQPQILEYTIENNLKSHVSFLVDIGIPQSRIGQIITAAPSLFSY 615
            L  IGVKHRDIKRILLRQPQILEYT+E+NLKSH +FL+ +GIP SRIGQII AAPSLFSY
Sbjct: 178  LQSIGVKHRDIKRILLRQPQILEYTVESNLKSHTAFLIGLGIPNSRIGQIIAAAPSLFSY 237

Query: 614  SVELSLKPTIRYLVEEVGIKRSNLSKVIQLSPQILVQRIDNSWTSRFSFLSKELGAPRES 435
            SVE SLKPT+RY+VEEVGI   N+ KV+QLSPQILVQRID SW +R+ FLS+ELGA R+S
Sbjct: 238  SVENSLKPTVRYMVEEVGIDEKNIGKVVQLSPQILVQRIDVSWNTRYLFLSRELGASRDS 297

Query: 434  IVKMVTKHPQLLHYSIEDGISPRIDFLRSIGMRDSDIXXXXXXXXXXXXXXLEDNLKPKY 255
            +VKMVTKHPQLLHYSI+DG  PRI+FLRSIGM + DI              LEDNLKPKY
Sbjct: 298  VVKMVTKHPQLLHYSIDDGFIPRINFLRSIGMHNGDILKVLTSLTQVLSLSLEDNLKPKY 357

Query: 254  LYLVNDLNNEVKSLTKYPMYLSLSLEQRIRPRHRFLVSLKKAPKGPFPLSSLVPTDASFC 75
             YL+N+L NEV+SLTKYP YLSLSL+QRIRPRHRFLV+LKKAPKGPFPLSS VPTD SFC
Sbjct: 358  KYLINELRNEVQSLTKYPTYLSLSLDQRIRPRHRFLVALKKAPKGPFPLSSFVPTDESFC 417

Query: 74   QQWAGTTLEKYLAFRQSLLLSDLA 3
            QQWAGT+++KYLAFRQ LLL + A
Sbjct: 418  QQWAGTSVDKYLAFRQQLLLKEFA 441


>ref|XP_004151387.1| PREDICTED: uncharacterized protein LOC101207692 [Cucumis sativus]
            gi|449517569|ref|XP_004165818.1| PREDICTED:
            uncharacterized protein LOC101227066 [Cucumis sativus]
          Length = 521

 Score =  503 bits (1296), Expect = e-140
 Identities = 270/468 (57%), Positives = 333/468 (71%), Gaps = 32/468 (6%)
 Frame = -1

Query: 1310 FAVCSSHSNPRILKPNRGYLY-------DDDDRGSELEEYPPFGDDFDL----EEFASNR 1164
            F V S+HS+  ILKP R   +       D D+ G +++E+   GDD D      +F+   
Sbjct: 47   FVVRSTHSSAAILKPKRRSRFGRTLSPFDSDEDGYDVDEFSSDGDDDDAWPDNGDFSDVE 106

Query: 1163 HSDK-KPTNFYSLVPNKRPGYQ--RPPRKDKVIPA-------KISSRDLSY--ISGSTKP 1020
            +  K K     S   N        R PR+ + I +       K+ S  L +  I+  T  
Sbjct: 107  YDAKRKRAKLQSKTRNNNSQRDNVRHPRESRGIKSSNDGKSFKVKSNHLDFQDITNDTVK 166

Query: 1019 NQMDLST---------KEKVEHGKFTLSRFQKLAEELDFDEKWFPLIEYLSTFGLKETHF 867
            +  ++           K KV   K    RF +LAEE+D DEKWFPL+ YL+TFGLKE+HF
Sbjct: 167  HDFNIDEEVCSTNTGRKGKVMTKKSMEIRFPRLAEEIDLDEKWFPLLNYLTTFGLKESHF 226

Query: 866  ISIYERHMPCLQINLASARERLDFLIGIGVKHRDIKRILLRQPQILEYTIENNLKSHVSF 687
            + +YERHMP LQIN+ SA+ERL++L+ +GVK RD++RILLRQPQILEYT+ENNLKSHV+F
Sbjct: 227  LQMYERHMPSLQINVYSAQERLEYLLSVGVKQRDVRRILLRQPQILEYTVENNLKSHVAF 286

Query: 686  LVDIGIPQSRIGQIITAAPSLFSYSVELSLKPTIRYLVEEVGIKRSNLSKVIQLSPQILV 507
            L+ +GIP SR+GQII AAPSLFSYSVE SLKPT+RYLVEEVGI+  +L KV+QLSPQILV
Sbjct: 287  LLSLGIPTSRVGQIIAAAPSLFSYSVENSLKPTVRYLVEEVGIQEKDLGKVVQLSPQILV 346

Query: 506  QRIDNSWTSRFSFLSKELGAPRESIVKMVTKHPQLLHYSIEDGISPRIDFLRSIGMRDSD 327
            QRID SW +R+ FLSKE+GAPR+++VKMVTKHPQLLHYSI DG+ PRI+FLRSIGMR+S+
Sbjct: 347  QRIDTSWNTRYMFLSKEIGAPRDNVVKMVTKHPQLLHYSINDGLLPRINFLRSIGMRNSE 406

Query: 326  IXXXXXXXXXXXXXXLEDNLKPKYLYLVNDLNNEVKSLTKYPMYLSLSLEQRIRPRHRFL 147
            I              LEDNLKPKY+YL+N+L NEVKSLTKYPMYLSLSL+QRIRPRHRFL
Sbjct: 407  ILKVLTSLTQVFSLSLEDNLKPKYMYLINELRNEVKSLTKYPMYLSLSLDQRIRPRHRFL 466

Query: 146  VSLKKAPKGPFPLSSLVPTDASFCQQWAGTTLEKYLAFRQSLLLSDLA 3
            VSLKKAPKGPFPLSS VPTD  FC+QWA T+L+KYL FR+ LLL + A
Sbjct: 467  VSLKKAPKGPFPLSSFVPTDECFCEQWAETSLDKYLEFRKRLLLKEFA 514


>ref|NP_001060114.1| Os07g0583200 [Oryza sativa Japonica Group]
            gi|27817836|dbj|BAC55604.1| unknown protein [Oryza sativa
            Japonica Group] gi|113611650|dbj|BAF22028.1| Os07g0583200
            [Oryza sativa Japonica Group]
            gi|215701195|dbj|BAG92619.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222637347|gb|EEE67479.1|
            hypothetical protein OsJ_24896 [Oryza sativa Japonica
            Group]
          Length = 503

 Score =  498 bits (1283), Expect = e-138
 Identities = 276/483 (57%), Positives = 339/483 (70%), Gaps = 26/483 (5%)
 Frame = -1

Query: 1385 PIAHRPFVPSP-PRIAPS-VSHRAGIGFAVCSSHSNPRILKPNRG-----YLY-----DD 1242
            P+A     P P PR+ P   S  A  G    S  +N R+LKPNR      Y Y     D+
Sbjct: 6    PLAALRPAPFPLPRLLPCPASAAARRGAVAFSLQTNVRLLKPNRRSRRSRYPYYDHDEDE 65

Query: 1241 DDRGSELEEYPPFGDDFDLEEFASNRHSDKKPTNFYS---LVPNKRPGYQRPPRKDKVIP 1071
            DD  +E E      ++ D  E   +    + P   YS     P K+PG ++P  K     
Sbjct: 66   DDDEAEFEFEEGEEEEEDGYETDDDLSGLEYPGVLYSNNPRAPIKKPGREKPALKQNWEG 125

Query: 1070 AKISSRDLSYIS-----------GSTKPNQMDLSTKEKVEHGKFTLSRFQKLAEELDFDE 924
             +  +RD    S            S     +D+  + ++++   + S FQKL EE DFD+
Sbjct: 126  RQPKTRDRCDTSKKVDALHAKSKASRSTGLVDIDNEVELKNESISRSLFQKLQEEYDFDD 185

Query: 923  KWFPLIEYLSTFGLKETHFISIYERHMPCLQINLASARERLDFLIGIGVKHRDIKRILLR 744
            KW PLI+YL TFGLKE+HF ++YERHM C QI+ ASA ERL+FL+ +GVK +D+KR+L+R
Sbjct: 186  KWLPLIDYLCTFGLKESHFTNMYERHMACFQISQASAEERLEFLLSVGVKSKDMKRMLVR 245

Query: 743  QPQILEYTIENNLKSHVSFLVDIGIPQSRIGQIITAAPSLFSYSVELSLKPTIRYLVEEV 564
            QPQILEYT+ +NLKSHV+FLV IG+P +RIGQII+AAPS FSYSVE SLKPTIRYL+EEV
Sbjct: 246  QPQILEYTL-SNLKSHVAFLVGIGVPSARIGQIISAAPSFFSYSVEQSLKPTIRYLIEEV 304

Query: 563  GIKRSNLSKVIQLSPQILVQRIDNSWTSRFSFLSKELGAPRESIVKMVTKHPQLLHYSIE 384
            GI+ S++ KV+QLSPQILVQRID++W SRF FLSKELGAP+++IVKMVTKHPQLLHYSIE
Sbjct: 305  GIEESDVGKVVQLSPQILVQRIDSAWKSRFLFLSKELGAPKDNIVKMVTKHPQLLHYSIE 364

Query: 383  DGISPRIDFLRSIGMRDSDIXXXXXXXXXXXXXXLEDNLKPKYLYLVNDLNNEVKSLTKY 204
            DGI PRI+FLRSIGMRD+D+              LE+NLKPKYLYLVNDL N+V+SLTKY
Sbjct: 365  DGILPRINFLRSIGMRDTDVLKVLTSLTQVLSLSLEENLKPKYLYLVNDLKNDVQSLTKY 424

Query: 203  PMYLSLSLEQRIRPRHRFLVSLKKAPKGPFPLSSLVPTDASFCQQWAGTTLEKYLAFRQS 24
            PMYLSLSL+QRIRPRHRFLVSLKKAPKGPFPLSS VPTD  FC++WAGT+LEKY  FRQS
Sbjct: 425  PMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLSSFVPTDERFCKRWAGTSLEKYHTFRQS 484

Query: 23   LLL 15
            +LL
Sbjct: 485  MLL 487


>ref|XP_002864399.1| mitochondrial transcription termination factor family protein
            [Arabidopsis lyrata subsp. lyrata]
            gi|297310234|gb|EFH40658.1| mitochondrial transcription
            termination factor family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 493

 Score =  497 bits (1279), Expect = e-138
 Identities = 266/478 (55%), Positives = 334/478 (69%), Gaps = 10/478 (2%)
 Frame = -1

Query: 1406 PKMLCLHPIAHRPFVPSPPRIAPSVSHRAGI--GFAVCSSHSNPRILKPNRGYLYD---- 1245
            P++L   P     FV    + +P+   R+    GF V  +HSNP+I+ P +   Y     
Sbjct: 12   PRILFTLPSESPLFVLGSDKCSPATRRRSRKTRGFVVTYAHSNPKIINPKKKSRYGQTLS 71

Query: 1244 --DDDRGSELEEYPPFGDDFDL-EEFAS-NRHSDKKPTNFYSLVPNKRPGYQRPPRKDKV 1077
              D D   EL++     DD+ L ++FA    +  KKP +    +  K          +K 
Sbjct: 72   PYDSDEDEELDDDED--DDWLLNDDFAEVTEYEKKKPKSQKQTMAKKGVKKGIVKNWEKP 129

Query: 1076 IPAKISSRDLSYISGSTKPNQMDLSTKEKVEHGKFTLSRFQKLAEELDFDEKWFPLIEYL 897
              ++    DL  I  S       L  + KV   K+    + +L+EE+D D KW PL++YL
Sbjct: 130  EESETDEDDLD-IGISRNRESWRLDGRGKVSSRKYVEKLYPRLSEEIDIDPKWVPLLDYL 188

Query: 896  STFGLKETHFISIYERHMPCLQINLASARERLDFLIGIGVKHRDIKRILLRQPQILEYTI 717
            STFGLKE+HF+ +YERHMP LQIN+ SA+ERLD+L+ +GVKHRDIKR+LLRQPQIL+YT+
Sbjct: 189  STFGLKESHFVQMYERHMPSLQINVLSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTV 248

Query: 716  ENNLKSHVSFLVDIGIPQSRIGQIITAAPSLFSYSVELSLKPTIRYLVEEVGIKRSNLSK 537
            ENNLK+H+SFL+ +GIP S+IGQI+ A PSLFSYSVE SL+PTIRYL+EEVGIK +++ K
Sbjct: 249  ENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGK 308

Query: 536  VIQLSPQILVQRIDNSWTSRFSFLSKELGAPRESIVKMVTKHPQLLHYSIEDGISPRIDF 357
            V+QLSPQILVQR+D +W +R+ FLSKELGAPR+S+VKMV KHPQLLHYSI+DG  PRI+F
Sbjct: 309  VVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINF 368

Query: 356  LRSIGMRDSDIXXXXXXXXXXXXXXLEDNLKPKYLYLVNDLNNEVKSLTKYPMYLSLSLE 177
            LRSIGM +SDI              LEDNLKPKY+YLVN+LNNEV  LTKYPMYLSLSL+
Sbjct: 369  LRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLD 428

Query: 176  QRIRPRHRFLVSLKKAPKGPFPLSSLVPTDASFCQQWAGTTLEKYLAFRQSLLLSDLA 3
            QRIRPRHRFLV LKK  KGPFPLSSLVP D SFCQQWAGT+++ YLAFRQ LLL + A
Sbjct: 429  QRIRPRHRFLVELKKVRKGPFPLSSLVPNDESFCQQWAGTSVDTYLAFRQRLLLKEFA 486


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